RNA–Protein interactions for RNA: ENST00000464187.1

COL5A1-205, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 2

Gene COL5A1, Length 1,830 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-205ENST00000464187 CKLFQ9UBR5 152 aa12.8□□□□□ -0.36
COL5A1-205ENST00000464187 CYB5R1Q9UHQ9 305 aa12.8□□□□□ -0.36
COL5A1-205ENST00000464187 BSNQ9UPA5 3926 aa12.8□□□□□ -0.36
COL5A1-205ENST00000464187 ZNF407Q9C0G0 2248 aa12.79□□□□□ -0.36
COL5A1-205ENST00000464187 LOC100289279A0A1B0GTE1 492 aa12.79□□□□□ -0.36
COL5A1-205ENST00000464187 TMEM272A0A1B0GTI8 110 aa12.79□□□□□ -0.36
COL5A1-205ENST00000464187 TMEM269A0A1B0GVZ9 245 aa12.79□□□□□ -0.36
COL5A1-205ENST00000464187 LMX1BO60663 402 aa12.79□□□□□ -0.36
COL5A1-205ENST00000464187 IGHG1P01857 330 aa12.79□□□□□ -0.36
COL5A1-205ENST00000464187 IGHG3P01860 377 aa12.79□□□□□ -0.36
COL5A1-205ENST00000464187 DCTDP32321 178 aa12.79□□□□□ -0.36
COL5A1-205ENST00000464187 CXADRP78310 365 aa12.79□□□□□ -0.36
COL5A1-205ENST00000464187 C3AR1Q16581 482 aa12.79□□□□□ -0.36
COL5A1-205ENST00000464187 C2orf76Q3KRA6 126 aa12.79□□□□□ -0.36
COL5A1-205ENST00000464187 ELFN2Q5R3F8 820 aa12.79□□□□□ -0.36
COL5A1-205ENST00000464187 SFRP4Q6FHJ7 346 aaPredicted RBP12.79□□□□□ -0.36
COL5A1-205ENST00000464187 SLC25A47Q6Q0C1 308 aa12.79□□□□□ -0.36
COL5A1-205ENST00000464187 ZNF704Q6ZNC4 412 aaPredicted RBP12.79□□□□□ -0.36
COL5A1-205ENST00000464187 SLC7A5P1Q8MH63 180 aa12.79□□□□□ -0.36
COL5A1-205ENST00000464187 ASCC1Q8N9N2 400 aaKnown RBP12.79□□□□□ -0.36
COL5A1-205ENST00000464187 OR51A2Q8NGJ7 313 aa12.79□□□□□ -0.36
COL5A1-205ENST00000464187 OR56B4Q8NH76 319 aa12.79□□□□□ -0.36
COL5A1-205ENST00000464187 ZFAND1Q8TCF1 268 aa12.79□□□□□ -0.36
COL5A1-205ENST00000464187 FAM206AQ9NX38 181 aa12.79□□□□□ -0.36
COL5A1-205ENST00000464187 CACNA1GO43497 2377 aa12.79□□□□□ -0.36
COL5A1-205ENST00000464187 CIB4A0PJX0 185 aa12.78□□□□□ -0.36
COL5A1-205ENST00000464187 GGT3PA6NGU5 568 aa12.78□□□□□ -0.36
COL5A1-205ENST00000464187 ZNF726A6NNF4 738 aa12.78□□□□□ -0.36
COL5A1-205ENST00000464187 P2RY10O00398 339 aa12.78□□□□□ -0.36
COL5A1-205ENST00000464187 KDM4BO94953 1096 aa12.78□□□□□ -0.36
COL5A1-205ENST00000464187 UBCP0CG48 685 aaKnown RBP12.78□□□□□ -0.36
COL5A1-205ENST00000464187 CD37P11049 281 aa12.78□□□□□ -0.36
COL5A1-205ENST00000464187 TNK1Q13470 666 aa12.78□□□□□ -0.36
COL5A1-205ENST00000464187 ST3GAL2Q16842 350 aa12.78□□□□□ -0.36
COL5A1-205ENST00000464187 CARD17Q5XLA6 110 aa12.78□□□□□ -0.36
COL5A1-205ENST00000464187 CD276Q5ZPR3 534 aa12.78□□□□□ -0.36
COL5A1-205ENST00000464187 GLT8D1Q68CQ7 371 aa12.78□□□□□ -0.36
COL5A1-205ENST00000464187 ABLIM2Q6H8Q1 611 aa12.78□□□□□ -0.36
COL5A1-205ENST00000464187 CFAP77Q6ZQR2 320 aa12.78□□□□□ -0.36
COL5A1-205ENST00000464187 HIST2H2ABQ8IUE6 130 aaPredicted RBP12.78□□□□□ -0.36
COL5A1-205ENST00000464187 EMC7Q9NPA0 242 aa12.78□□□□□ -0.36
COL5A1-205ENST00000464187 FLVCR2Q9UPI3 526 aa12.78□□□□□ -0.36
COL5A1-205ENST00000464187 TP53TG5Q9Y2B4 290 aa12.78□□□□□ -0.36
COL5A1-205ENST00000464187 LHFPL6Q9Y693 200 aa12.78□□□□□ -0.36
COL5A1-205ENST00000464187 PTPRQQ9UMZ3 2332 aa12.78□□□□□ -0.36
COL5A1-205ENST00000464187 DNAJC13O75165 2243 aa12.78□□□□□ -0.36
COL5A1-205ENST00000464187 ZNF716A6NP11 495 aa12.78□□□□□ -0.36
COL5A1-205ENST00000464187 CYTIPO60759 359 aa12.78□□□□□ -0.36
COL5A1-205ENST00000464187 WISP2O76076 250 aa12.78□□□□□ -0.36
COL5A1-205ENST00000464187 CPN1P15169 458 aa12.78□□□□□ -0.36
COL5A1-205ENST00000464187 MMP16P51512 607 aa12.78□□□□□ -0.36
COL5A1-205ENST00000464187 TMEM244Q5VVB8 128 aa12.78□□□□□ -0.36
COL5A1-205ENST00000464187 FAAP20Q6NZ36 180 aa12.78□□□□□ -0.36
COL5A1-205ENST00000464187 PLXDC2Q6UX71 529 aa12.78□□□□□ -0.36
COL5A1-205ENST00000464187 ZIC4Q8N9L1 334 aa12.78□□□□□ -0.36
COL5A1-205ENST00000464187 ABHD3Q8WU67 409 aa12.78□□□□□ -0.36
COL5A1-205ENST00000464187 ZNF775Q96BV0 537 aaPredicted RBP12.78□□□□□ -0.36
COL5A1-205ENST00000464187 WDYHV1Q96HA8 205 aa12.78□□□□□ -0.36
COL5A1-205ENST00000464187 MS4A3Q96HJ5 214 aa12.78□□□□□ -0.36
COL5A1-205ENST00000464187 ACTR6Q9GZN1 396 aa12.78□□□□□ -0.36
COL5A1-205ENST00000464187 C1orf198Q9H425 327 aa12.78□□□□□ -0.36
COL5A1-205ENST00000464187 SLC17A5Q9NRA2 495 aa12.78□□□□□ -0.36
COL5A1-205ENST00000464187 CGGBP1Q9UFW8 167 aaPredicted RBP12.78□□□□□ -0.36
COL5A1-205ENST00000464187 NCOA6Q14686 2063 aaPredicted RBP12.78□□□□□ -0.36
COL5A1-205ENST00000464187 PEX14O75381 377 aa12.77□□□□□ -0.37
COL5A1-205ENST00000464187 TTRP02766 147 aa12.77□□□□□ -0.37
COL5A1-205ENST00000464187 ALDOBP05062 364 aa12.77□□□□□ -0.37
COL5A1-205ENST00000464187 ACSM4P0C7M7 580 aa12.77□□□□□ -0.37
COL5A1-205ENST00000464187 PSMB1P20618 241 aaKnown RBP12.77□□□□□ -0.37
COL5A1-205ENST00000464187 HTR2CP28335 458 aa12.77□□□□□ -0.37
COL5A1-205ENST00000464187 CDAP32320 146 aa12.77□□□□□ -0.37
COL5A1-205ENST00000464187 PLEKHN1Q494U1 663 aaPredicted RBP12.77□□□□□ -0.37
COL5A1-205ENST00000464187 UNQ6494/PRO21346Q6UXR6 183 aa12.77□□□□□ -0.37
COL5A1-205ENST00000464187 BEST4Q8NFU0 473 aa12.77□□□□□ -0.37
COL5A1-205ENST00000464187 PHF21AQ96BD5 680 aa12.77□□□□□ -0.37
COL5A1-205ENST00000464187 SLA2Q9H6Q3 261 aa12.77□□□□□ -0.37
COL5A1-205ENST00000464187 BEX1Q9HBH7 125 aa12.77□□□□□ -0.37
COL5A1-205ENST00000464187 NKIRAS2Q9NYR9 191 aa12.77□□□□□ -0.37
COL5A1-205ENST00000464187 GDF2Q9UK05 429 aaPredicted RBP12.77□□□□□ -0.37
COL5A1-205ENST00000464187 MCTS1Q9ULC4 181 aaKnown RBP12.77□□□□□ -0.37
COL5A1-205ENST00000464187 LHX6Q9UPM6 363 aa12.77□□□□□ -0.37
COL5A1-205ENST00000464187 FLVCR1Q9Y5Y0 555 aa12.77□□□□□ -0.37
COL5A1-205ENST00000464187 CACNA1AO00555 2505 aa12.77□□□□□ -0.37
COL5A1-205ENST00000464187 H7C417 338 aa12.76□□□□□ -0.37
COL5A1-205ENST00000464187 CXCL3P19876 107 aa12.76□□□□□ -0.37
COL5A1-205ENST00000464187 VEGFCP49767 419 aa12.76□□□□□ -0.37
COL5A1-205ENST00000464187 SELENOPP49908 381 aa12.76□□□□□ -0.37
COL5A1-205ENST00000464187 GUCA2AQ02747 115 aa12.76□□□□□ -0.37
COL5A1-205ENST00000464187 SPOCK1Q08629 439 aa12.76□□□□□ -0.37
COL5A1-205ENST00000464187 HIST3H3Q16695 136 aa12.76□□□□□ -0.37
COL5A1-205ENST00000464187 NDUFA5Q16718 116 aa12.76□□□□□ -0.37
COL5A1-205ENST00000464187 GLYATL3Q5SZD4 288 aa12.76□□□□□ -0.37
COL5A1-205ENST00000464187 RPUSD3Q6P087 351 aaKnown RBP12.76□□□□□ -0.37
COL5A1-205ENST00000464187 KLHL24Q6TFL4 600 aa12.76□□□□□ -0.37
COL5A1-205ENST00000464187 CHMP1BQ7LBR1 199 aa12.76□□□□□ -0.37
COL5A1-205ENST00000464187 FGD2Q7Z6J4 655 aa12.76□□□□□ -0.37
COL5A1-205ENST00000464187 OR6M1Q8NGM8 313 aa12.76□□□□□ -0.37
COL5A1-205ENST00000464187 FNDC9Q8TBE3 224 aa12.76□□□□□ -0.37
COL5A1-205ENST00000464187 SEC61A2Q9H9S3 476 aa12.76□□□□□ -0.37
COL5A1-205ENST00000464187 DIABLOQ9NR28 239 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms