RNA–Protein interactions for RNA: ENST00000463818.1

SF3A1-205, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 583 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-205ENST00000463818 CA6P23280 308 aa15.77■□□□□ 0.12
SF3A1-205ENST00000463818 CD200P41217 278 aa15.77■□□□□ 0.12
SF3A1-205ENST00000463818 GNB2P62879 340 aa15.77■□□□□ 0.12
SF3A1-205ENST00000463818 MS4A2Q01362 244 aa15.77■□□□□ 0.12
SF3A1-205ENST00000463818 PAX2Q02962 417 aa15.77■□□□□ 0.12
SF3A1-205ENST00000463818 ZNF92Q03936 586 aa15.77■□□□□ 0.12
SF3A1-205ENST00000463818 MICAQ29983 383 aa15.77■□□□□ 0.12
SF3A1-205ENST00000463818 TUSC1Q2TAM9 212 aa15.77■□□□□ 0.12
SF3A1-205ENST00000463818 SNAI3Q3KNW1 292 aa15.77■□□□□ 0.12
SF3A1-205ENST00000463818 ZNF404Q494X3 552 aa15.77■□□□□ 0.12
SF3A1-205ENST00000463818 DCXRQ7Z4W1 244 aa15.77■□□□□ 0.12
SF3A1-205ENST00000463818 DHFR2Q86XF0 187 aa15.77■□□□□ 0.12
SF3A1-205ENST00000463818 C3orf56Q8N813 242 aa15.77■□□□□ 0.12
SF3A1-205ENST00000463818 ZNF511Q8NB15 262 aa15.77■□□□□ 0.12
SF3A1-205ENST00000463818 OR11L1Q8NGX0 322 aa15.77■□□□□ 0.12
SF3A1-205ENST00000463818 Q8TCH9 128 aa15.77■□□□□ 0.12
SF3A1-205ENST00000463818 NEIL1Q96FI4 390 aaPredicted RBP15.77■□□□□ 0.12
SF3A1-205ENST00000463818 MAGIXQ9H6Y5 334 aa15.77■□□□□ 0.12
SF3A1-205ENST00000463818 UFSP2Q9NUQ7 469 aa15.77■□□□□ 0.12
SF3A1-205ENST00000463818 VNN3Q9NY84 501 aa15.77■□□□□ 0.12
SF3A1-205ENST00000463818 TAS2R1Q9NYW7 299 aa15.77■□□□□ 0.12
SF3A1-205ENST00000463818 PRPF19Q9UMS4 504 aaKnown RBP15.77■□□□□ 0.12
SF3A1-205ENST00000463818 C5orf63A6NC05 138 aa15.76■□□□□ 0.11
SF3A1-205ENST00000463818 ZNF593O00488 134 aaPredicted RBP15.76■□□□□ 0.11
SF3A1-205ENST00000463818 FAM20BO75063 409 aa15.76■□□□□ 0.11
SF3A1-205ENST00000463818 ANOS1P23352 680 aa15.76■□□□□ 0.11
SF3A1-205ENST00000463818 FMO3P31513 532 aa15.76■□□□□ 0.11
SF3A1-205ENST00000463818 OTX1P32242 354 aaPredicted RBP15.76■□□□□ 0.11
SF3A1-205ENST00000463818 RAD23AP54725 363 aa15.76■□□□□ 0.11
SF3A1-205ENST00000463818 CRMP1Q14194 572 aa15.76■□□□□ 0.11
SF3A1-205ENST00000463818 TRIM25Q14258 630 aaKnown RBP15.76■□□□□ 0.11
SF3A1-205ENST00000463818 OR8G1Q15617 311 aa15.76■□□□□ 0.11
SF3A1-205ENST00000463818 MPPED2Q15777 294 aa15.76■□□□□ 0.11
SF3A1-205ENST00000463818 PRAMEF6Q5VXH4 476 aa15.76■□□□□ 0.11
SF3A1-205ENST00000463818 OR2T5Q6IEZ7 315 aa15.76■□□□□ 0.11
SF3A1-205ENST00000463818 DRAM2Q6UX65 266 aa15.76■□□□□ 0.11
SF3A1-205ENST00000463818 LYPD2Q6UXB3 125 aa15.76■□□□□ 0.11
SF3A1-205ENST00000463818 BTNL3Q6UXE8 466 aa15.76■□□□□ 0.11
SF3A1-205ENST00000463818 LRRN1Q6UXK5 716 aa15.76■□□□□ 0.11
SF3A1-205ENST00000463818 OR2T29Q8NH02 315 aa15.76■□□□□ 0.11
SF3A1-205ENST00000463818 OR4Q3Q8NH05 313 aa15.76■□□□□ 0.11
SF3A1-205ENST00000463818 OR2AE1Q8NHA4 323 aa15.76■□□□□ 0.11
SF3A1-205ENST00000463818 RAB40AQ8WXH6 277 aa15.76■□□□□ 0.11
SF3A1-205ENST00000463818 PLEKHA8Q96JA3 519 aa15.76■□□□□ 0.11
SF3A1-205ENST00000463818 NMNAT2Q9BZQ4 307 aa15.76■□□□□ 0.11
SF3A1-205ENST00000463818 SLC22A4Q9H015 551 aa15.76■□□□□ 0.11
SF3A1-205ENST00000463818 MUC13Q9H3R2 512 aa15.76■□□□□ 0.11
SF3A1-205ENST00000463818 CENPMQ9NSP4 180 aa15.76■□□□□ 0.11
SF3A1-205ENST00000463818 COMMD3-BMI1R4GMX3 469 aa15.76■□□□□ 0.11
SF3A1-205ENST00000463818 U3KQV3 271 aa15.76■□□□□ 0.11
SF3A1-205ENST00000463818 GGT3PA6NGU5 568 aa15.75■□□□□ 0.11
SF3A1-205ENST00000463818 SOX14O95416 240 aa15.75■□□□□ 0.11
SF3A1-205ENST00000463818 GYPBP06028 91 aa15.75■□□□□ 0.11
SF3A1-205ENST00000463818 SPARCP09486 303 aa15.75■□□□□ 0.11
SF3A1-205ENST00000463818 ENTPD1P49961 510 aa15.75■□□□□ 0.11
SF3A1-205ENST00000463818 PRKXP51817 358 aa15.75■□□□□ 0.11
SF3A1-205ENST00000463818 SLC25A1P53007 311 aa15.75■□□□□ 0.11
SF3A1-205ENST00000463818 TAF13Q15543 124 aa15.75■□□□□ 0.11
SF3A1-205ENST00000463818 FAM98BQ52LJ0 330 aaKnown RBP15.75■□□□□ 0.11
SF3A1-205ENST00000463818 LCN8Q6JVE9 175 aa15.75■□□□□ 0.11
SF3A1-205ENST00000463818 DOK3Q7L591 496 aa15.75■□□□□ 0.11
SF3A1-205ENST00000463818 C19orf18Q8NEA5 215 aa15.75■□□□□ 0.11
SF3A1-205ENST00000463818 OR8B3Q8NGG8 313 aa15.75■□□□□ 0.11
SF3A1-205ENST00000463818 OR8B2Q96RD0 313 aa15.75■□□□□ 0.11
SF3A1-205ENST00000463818 COPS4Q9BT78 406 aa15.75■□□□□ 0.11
SF3A1-205ENST00000463818 DGCR6LQ9BY27 220 aa15.75■□□□□ 0.11
SF3A1-205ENST00000463818 REEP1Q9H902 201 aa15.75■□□□□ 0.11
SF3A1-205ENST00000463818 ARMC1Q9NVT9 282 aa15.75■□□□□ 0.11
SF3A1-205ENST00000463818 BAIAP2Q9UQB8 552 aa15.75■□□□□ 0.11
SF3A1-205ENST00000463818 SAMHD1Q9Y3Z3 626 aaKnown RBP15.75■□□□□ 0.11
SF3A1-205ENST00000463818 N6AMT1Q9Y5N5 214 aa15.75■□□□□ 0.11
SF3A1-205ENST00000463818 IGHV2-70DA0A0C4DH43 119 aa15.74■□□□□ 0.11
SF3A1-205ENST00000463818 KIR2DS1A0A191URI9 304 aa15.74■□□□□ 0.11
SF3A1-205ENST00000463818 GMDSO60547 372 aa15.74■□□□□ 0.11
SF3A1-205ENST00000463818 SPI1P17947 270 aa15.74■□□□□ 0.11
SF3A1-205ENST00000463818 PITPNBP48739 271 aa15.74■□□□□ 0.11
SF3A1-205ENST00000463818 PCK2Q16822 640 aa15.74■□□□□ 0.11
SF3A1-205ENST00000463818 TEX30Q5JUR7 227 aa15.74■□□□□ 0.11
SF3A1-205ENST00000463818 GLYATL3Q5SZD4 288 aa15.74■□□□□ 0.11
SF3A1-205ENST00000463818 NLRC3Q7RTR2 1065 aa15.74■□□□□ 0.11
SF3A1-205ENST00000463818 OR2T33Q8NG76 320 aa15.74■□□□□ 0.11
SF3A1-205ENST00000463818 DACT3Q96B18 629 aaPredicted RBP15.74■□□□□ 0.11
SF3A1-205ENST00000463818 SLAMF6Q96DU3 332 aa15.74■□□□□ 0.11
SF3A1-205ENST00000463818 ZNF48Q96MX3 618 aaPredicted RBP15.74■□□□□ 0.11
SF3A1-205ENST00000463818 KCNJ15Q99712 375 aa15.74■□□□□ 0.11
SF3A1-205ENST00000463818 MS4A7Q9GZW8 240 aaPredicted RBP15.74■□□□□ 0.11
SF3A1-205ENST00000463818 RNF7Q9UBF6 113 aa15.74■□□□□ 0.11
SF3A1-205ENST00000463818 NOP16Q9Y3C1 178 aaKnown RBP15.74■□□□□ 0.11
SF3A1-205ENST00000463818 TENM1Q9UKZ4 2725 aa15.73■□□□□ 0.11
SF3A1-205ENST00000463818 IGHV3OR16-10A0A075B7F0 116 aa15.73■□□□□ 0.11
SF3A1-205ENST00000463818 IFNGP01579 166 aa15.73■□□□□ 0.11
SF3A1-205ENST00000463818 PPIAL4GP0DN37 164 aa15.73■□□□□ 0.11
SF3A1-205ENST00000463818 IGHV4-38-2P0DP08 117 aa15.73■□□□□ 0.11
SF3A1-205ENST00000463818 CLUP10909 449 aa15.73■□□□□ 0.11
SF3A1-205ENST00000463818 SLC2A1P11166 492 aa15.73■□□□□ 0.11
SF3A1-205ENST00000463818 PRTN3P24158 256 aa15.73■□□□□ 0.11
SF3A1-205ENST00000463818 HOXA4Q00056 320 aaPredicted RBP15.73■□□□□ 0.11
SF3A1-205ENST00000463818 BAMBIQ13145 260 aa15.73■□□□□ 0.11
SF3A1-205ENST00000463818 WDR25Q64LD2 544 aaPredicted RBP15.73■□□□□ 0.11
SF3A1-205ENST00000463818 DCDC5Q6ZRR9 648 aa15.73■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms