RNA–Protein interactions for RNA: ENST00000463511.1

SSNA1-203, Transcript of SS nuclear autoantigen 1, humanhuman

TSL 2

Gene SSNA1, Length 570 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSNA1-203ENST00000463511 E9PQ18 207 aa19.54■□□□□ 0.72
SSNA1-203ENST00000463511 CASQ2O14958 399 aaPredicted RBP19.54■□□□□ 0.72
SSNA1-203ENST00000463511 ICMTO60725 284 aa19.54■□□□□ 0.72
SSNA1-203ENST00000463511 CST2P09228 141 aa19.54■□□□□ 0.72
SSNA1-203ENST00000463511 MSR1P21757 451 aa19.54■□□□□ 0.72
SSNA1-203ENST00000463511 PRTN3P24158 256 aa19.54■□□□□ 0.72
SSNA1-203ENST00000463511 PYCR1P32322 319 aa19.54■□□□□ 0.72
SSNA1-203ENST00000463511 GUCA1AP43080 201 aaPredicted RBP19.54■□□□□ 0.72
SSNA1-203ENST00000463511 SEC61A1P61619 476 aaKnown RBP19.54■□□□□ 0.72
SSNA1-203ENST00000463511 ENDOGQ14249 297 aaKnown RBP19.54■□□□□ 0.72
SSNA1-203ENST00000463511 KCNMB1Q16558 191 aa19.54■□□□□ 0.72
SSNA1-203ENST00000463511 LRRC36Q1X8D7 754 aa19.54■□□□□ 0.72
SSNA1-203ENST00000463511 TUSC1Q2TAM9 212 aa19.54■□□□□ 0.72
SSNA1-203ENST00000463511 OR2T4Q8NH00 348 aa19.54■□□□□ 0.72
SSNA1-203ENST00000463511 HCAR1Q9BXC0 346 aa19.54■□□□□ 0.72
SSNA1-203ENST00000463511 TEX12Q9BXU0 123 aa19.54■□□□□ 0.72
SSNA1-203ENST00000463511 ZNF696Q9H7X3 374 aa19.54■□□□□ 0.72
SSNA1-203ENST00000463511 ELOVL3Q9HB03 270 aa19.54■□□□□ 0.72
SSNA1-203ENST00000463511 EMC7Q9NPA0 242 aa19.54■□□□□ 0.72
SSNA1-203ENST00000463511 NUP50Q9UKX7 468 aa19.54■□□□□ 0.72
SSNA1-203ENST00000463511 TRAPPC2LH3BP13 241 aa19.53■□□□□ 0.72
SSNA1-203ENST00000463511 CLUP10909 449 aa19.53■□□□□ 0.72
SSNA1-203ENST00000463511 PEX2P28328 305 aa19.53■□□□□ 0.72
SSNA1-203ENST00000463511 CENPAP49450 140 aa19.53■□□□□ 0.72
SSNA1-203ENST00000463511 EFNB1P98172 346 aa19.53■□□□□ 0.72
SSNA1-203ENST00000463511 PSG7Q13046 419 aa19.53■□□□□ 0.72
SSNA1-203ENST00000463511 ZNF154Q13106 437 aa19.53■□□□□ 0.72
SSNA1-203ENST00000463511 SNAPC1Q16533 368 aa19.53■□□□□ 0.72
SSNA1-203ENST00000463511 KLF17Q5JT82 389 aaPredicted RBP19.53■□□□□ 0.72
SSNA1-203ENST00000463511 OTPQ5XKR4 325 aa19.53■□□□□ 0.72
SSNA1-203ENST00000463511 BCL6BQ8N143 479 aaPredicted RBP19.53■□□□□ 0.72
SSNA1-203ENST00000463511 KLHL36Q8N4N3 616 aa19.53■□□□□ 0.72
SSNA1-203ENST00000463511 SPICQ8N5J4 248 aa19.53■□□□□ 0.72
SSNA1-203ENST00000463511 C4orf45Q96LM5 186 aa19.53■□□□□ 0.72
SSNA1-203ENST00000463511 C1orf147Q96MC9 270 aaPredicted RBP19.53■□□□□ 0.72
SSNA1-203ENST00000463511 MBOAT4Q96T53 435 aa19.53■□□□□ 0.72
SSNA1-203ENST00000463511 RNPEPL1Q9HAU8 725 aa19.53■□□□□ 0.72
SSNA1-203ENST00000463511 TMEM106BQ9NUM4 274 aa19.53■□□□□ 0.72
SSNA1-203ENST00000463511 TIMM10BQ9Y5J6 103 aa19.53■□□□□ 0.72
SSNA1-203ENST00000463511 AUP1Q9Y679 476 aa19.53■□□□□ 0.72
SSNA1-203ENST00000463511 GYPBP06028 91 aa19.52■□□□□ 0.72
SSNA1-203ENST00000463511 SPI1P17947 270 aa19.52■□□□□ 0.72
SSNA1-203ENST00000463511 PCBD1P61457 104 aa19.52■□□□□ 0.72
SSNA1-203ENST00000463511 SLC34A1Q06495 639 aa19.52■□□□□ 0.72
SSNA1-203ENST00000463511 CDK5R2Q13319 367 aa19.52■□□□□ 0.72
SSNA1-203ENST00000463511 OGFRL1Q5TC84 451 aaPredicted RBP19.52■□□□□ 0.72
SSNA1-203ENST00000463511 CPOQ8IVL8 374 aa19.52■□□□□ 0.72
SSNA1-203ENST00000463511 GALNT4Q8N4A0 578 aa19.52■□□□□ 0.72
SSNA1-203ENST00000463511 SLC26A10Q8NG04 563 aa19.52■□□□□ 0.72
SSNA1-203ENST00000463511 OR51L1Q8NGJ5 315 aa19.52■□□□□ 0.72
SSNA1-203ENST00000463511 PLEKHA8Q96JA3 519 aa19.52■□□□□ 0.72
SSNA1-203ENST00000463511 ZNF48Q96MX3 618 aaPredicted RBP19.52■□□□□ 0.72
SSNA1-203ENST00000463511 POFUT1Q9H488 388 aa19.52■□□□□ 0.72
SSNA1-203ENST00000463511 TOR3AQ9H497 397 aa19.52■□□□□ 0.72
SSNA1-203ENST00000463511 PATZ1Q9HBE1 687 aaKnown RBP19.52■□□□□ 0.72
SSNA1-203ENST00000463511 PLEK2Q9NYT0 353 aa19.52■□□□□ 0.72
SSNA1-203ENST00000463511 PRR23D1E9PI22 279 aaPredicted RBP19.51■□□□□ 0.71
SSNA1-203ENST00000463511 DLGAP1O14490 977 aa19.51■□□□□ 0.71
SSNA1-203ENST00000463511 PRKYO43930 277 aa19.51■□□□□ 0.71
SSNA1-203ENST00000463511 ABHD16AO95870 558 aa19.51■□□□□ 0.71
SSNA1-203ENST00000463511 PRR23D2P0DMB1 279 aaPredicted RBP19.51■□□□□ 0.71
SSNA1-203ENST00000463511 ZNF12P17014 697 aa19.51■□□□□ 0.71
SSNA1-203ENST00000463511 LSM6P62312 80 aaKnown RBP19.51■□□□□ 0.71
SSNA1-203ENST00000463511 MEP1BQ16820 701 aa19.51■□□□□ 0.71
SSNA1-203ENST00000463511 PLBD1Q6P4A8 553 aa19.51■□□□□ 0.71
SSNA1-203ENST00000463511 PROKR2Q8NFJ6 384 aa19.51■□□□□ 0.71
SSNA1-203ENST00000463511 OR2Z1Q8NG97 314 aa19.51■□□□□ 0.71
SSNA1-203ENST00000463511 OTULINQ96BN8 352 aa19.51■□□□□ 0.71
SSNA1-203ENST00000463511 POLR3KQ9Y2Y1 108 aaPredicted RBP19.51■□□□□ 0.71
SSNA1-203ENST00000463511 INSIG2Q9Y5U4 225 aa19.51■□□□□ 0.71
SSNA1-203ENST00000463511 M0R129 80 aa19.5■□□□□ 0.71
SSNA1-203ENST00000463511 PAICSP22234 425 aaKnown RBP19.5■□□□□ 0.71
SSNA1-203ENST00000463511 SLC6A9P48067 706 aa19.5■□□□□ 0.71
SSNA1-203ENST00000463511 BTG1P62324 171 aa19.5■□□□□ 0.71
SSNA1-203ENST00000463511 BAMBIQ13145 260 aa19.5■□□□□ 0.71
SSNA1-203ENST00000463511 ZMYND11Q15326 602 aa19.5■□□□□ 0.71
SSNA1-203ENST00000463511 TMEM155Q4W5P6 130 aa19.5■□□□□ 0.71
SSNA1-203ENST00000463511 LINC01590Q5TEZ4 76 aa19.5■□□□□ 0.71
SSNA1-203ENST00000463511 ARL9Q6T311 187 aa19.5■□□□□ 0.71
SSNA1-203ENST00000463511 PACRGLQ8N7B6 248 aa19.5■□□□□ 0.71
SSNA1-203ENST00000463511 ZNF283Q8N7M2 679 aa19.5■□□□□ 0.71
SSNA1-203ENST00000463511 TCEANCQ8N8B7 351 aa19.5■□□□□ 0.71
SSNA1-203ENST00000463511 HRASLS5Q96KN8 279 aa19.5■□□□□ 0.71
SSNA1-203ENST00000463511 MRI1Q9BV20 369 aa19.5■□□□□ 0.71
SSNA1-203ENST00000463511 UNKLQ9H9P5 680 aaKnown RBP19.5■□□□□ 0.71
SSNA1-203ENST00000463511 ZMAT3Q9HA38 289 aaKnown RBP19.5■□□□□ 0.71
SSNA1-203ENST00000463511 C8orf4Q9NR00 106 aa19.5■□□□□ 0.71
SSNA1-203ENST00000463511 MRPL22Q9NWU5 206 aaKnown RBP19.5■□□□□ 0.71
SSNA1-203ENST00000463511 NDRG4Q9ULP0 352 aaKnown RBP19.5■□□□□ 0.71
SSNA1-203ENST00000463511 TGP01266 2768 aa19.5■□□□□ 0.71
SSNA1-203ENST00000463511 C12orf71A8MTZ7 269 aa19.49■□□□□ 0.71
SSNA1-203ENST00000463511 TNFRSF1AP19438 455 aa19.49■□□□□ 0.71
SSNA1-203ENST00000463511 TNFSF4P23510 183 aa19.49■□□□□ 0.71
SSNA1-203ENST00000463511 RIPK1Q13546 671 aa19.49■□□□□ 0.71
SSNA1-203ENST00000463511 LYPD4Q6UWN0 246 aa19.49■□□□□ 0.71
SSNA1-203ENST00000463511 Q6ZR03 302 aa19.49■□□□□ 0.71
SSNA1-203ENST00000463511 SYT9Q86SS6 491 aa19.49■□□□□ 0.71
SSNA1-203ENST00000463511 LRRC28Q86X40 367 aaPredicted RBP19.49■□□□□ 0.71
SSNA1-203ENST00000463511 BBS1Q8NFJ9 593 aa19.49■□□□□ 0.71
SSNA1-203ENST00000463511 ITLN1Q8WWA0 313 aa19.49■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms