RNA–Protein interactions for RNA: ENST00000463244.6

CPSF7-209, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 545 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-209ENST00000463244 BOLLQ8N9W6 283 aaKnown RBP17.13■□□□□ 0.33
CPSF7-209ENST00000463244 SCCPDHQ8NBX0 429 aa17.13■□□□□ 0.33
CPSF7-209ENST00000463244 SLC26A10Q8NG04 563 aa17.13■□□□□ 0.33
CPSF7-209ENST00000463244 PITX2Q99697 317 aa17.13■□□□□ 0.33
CPSF7-209ENST00000463244 ATF6BQ99941 703 aa17.13■□□□□ 0.33
CPSF7-209ENST00000463244 TRIM36Q9NQ86 728 aa17.13■□□□□ 0.33
CPSF7-209ENST00000463244 SAR1AQ9NR31 198 aa17.13■□□□□ 0.33
CPSF7-209ENST00000463244 NOP16Q9Y3C1 178 aaKnown RBP17.13■□□□□ 0.33
CPSF7-209ENST00000463244 TRAV38-1A0A0B4J264 116 aa17.12■□□□□ 0.33
CPSF7-209ENST00000463244 A0A1W2PRQ8 180 aa17.12■□□□□ 0.33
CPSF7-209ENST00000463244 OOEPA6NGQ2 149 aa17.12■□□□□ 0.33
CPSF7-209ENST00000463244 FCN3O75636 299 aa17.12■□□□□ 0.33
CPSF7-209ENST00000463244 ARF6P62330 175 aa17.12■□□□□ 0.33
CPSF7-209ENST00000463244 TRAP1Q12931 704 aaKnown RBP17.12■□□□□ 0.33
CPSF7-209ENST00000463244 DGCR6Q14129 220 aa17.12■□□□□ 0.33
CPSF7-209ENST00000463244 LINC00346Q8IVM7 164 aa17.12■□□□□ 0.33
CPSF7-209ENST00000463244 OR6V1Q8N148 313 aa17.12■□□□□ 0.33
CPSF7-209ENST00000463244 PLPP7Q8NBV4 271 aa17.12■□□□□ 0.33
CPSF7-209ENST00000463244 ADAT1Q9BUB4 502 aaKnown RBP17.12■□□□□ 0.33
CPSF7-209ENST00000463244 RASSF4Q9H2L5 321 aa17.12■□□□□ 0.33
CPSF7-209ENST00000463244 DPAGT1Q9H3H5 408 aa17.12■□□□□ 0.33
CPSF7-209ENST00000463244 PNRC2Q9NPJ4 139 aaKnown RBP17.12■□□□□ 0.33
CPSF7-209ENST00000463244 AP3M1Q9Y2T2 418 aa17.12■□□□□ 0.33
CPSF7-209ENST00000463244 ENPP4Q9Y6X5 453 aa17.12■□□□□ 0.33
CPSF7-209ENST00000463244 CD300LBA8K4G0 201 aa17.11■□□□□ 0.33
CPSF7-209ENST00000463244 HMGB1P1B2RPK0 211 aaPredicted RBP17.11■□□□□ 0.33
CPSF7-209ENST00000463244 C11orf91Q3C1V1 193 aa17.11■□□□□ 0.33
CPSF7-209ENST00000463244 BTN2A1Q7KYR7 527 aa17.11■□□□□ 0.33
CPSF7-209ENST00000463244 MRPL21Q7Z2W9 205 aaKnown RBP17.11■□□□□ 0.33
CPSF7-209ENST00000463244 PDZD9Q8IXQ8 264 aa17.11■□□□□ 0.33
CPSF7-209ENST00000463244 SLC15A3Q8IY34 581 aa17.11■□□□□ 0.33
CPSF7-209ENST00000463244 PIP4P2Q8N4L2 257 aa17.11■□□□□ 0.33
CPSF7-209ENST00000463244 FAM110DQ8TAY7 271 aaPredicted RBP17.11■□□□□ 0.33
CPSF7-209ENST00000463244 LRTOMTQ8WZ04 291 aa17.11■□□□□ 0.33
CPSF7-209ENST00000463244 C16orf95Q9H693 158 aa17.11■□□□□ 0.33
CPSF7-209ENST00000463244 SRA1Q9HD15 236 aaKnown RBP17.11■□□□□ 0.33
CPSF7-209ENST00000463244 CYB5R1Q9UHQ9 305 aa17.11■□□□□ 0.33
CPSF7-209ENST00000463244 ZNF281Q9Y2X9 895 aa17.11■□□□□ 0.33
CPSF7-209ENST00000463244 TET2Q6N021 2002 aaPredicted RBP17.11■□□□□ 0.33
CPSF7-209ENST00000463244 UNC119BA6NIH7 251 aa17.1■□□□□ 0.33
CPSF7-209ENST00000463244 OR10H3O60404 316 aa17.1■□□□□ 0.33
CPSF7-209ENST00000463244 GMDSO60547 372 aa17.1■□□□□ 0.33
CPSF7-209ENST00000463244 ECDO95905 644 aaPredicted RBP17.1■□□□□ 0.33
CPSF7-209ENST00000463244 SERPINA1P01009 418 aa17.1■□□□□ 0.33
CPSF7-209ENST00000463244 GYPAP02724 150 aa17.1■□□□□ 0.33
CPSF7-209ENST00000463244 H1F0P07305 194 aaKnown RBP17.1■□□□□ 0.33
CPSF7-209ENST00000463244 LIPEQ05469 1076 aa17.1■□□□□ 0.33
CPSF7-209ENST00000463244 DBPQ10586 325 aaPredicted RBP17.1■□□□□ 0.33
CPSF7-209ENST00000463244 C2orf68Q2NKX9 166 aa17.1■□□□□ 0.33
CPSF7-209ENST00000463244 FGD3Q5JSP0 725 aa17.1■□□□□ 0.33
CPSF7-209ENST00000463244 SMARCD3Q6STE5 483 aa17.1■□□□□ 0.33
CPSF7-209ENST00000463244 ARPINQ7Z6K5 226 aa17.1■□□□□ 0.33
CPSF7-209ENST00000463244 FAM90A1Q86YD7 464 aa17.1■□□□□ 0.33
CPSF7-209ENST00000463244 NMNAT3Q96T66 252 aa17.1■□□□□ 0.33
CPSF7-209ENST00000463244 AURKCQ9UQB9 309 aa17.1■□□□□ 0.33
CPSF7-209ENST00000463244 NOTCH3Q9UM47 2321 aa17.1■□□□□ 0.33
CPSF7-209ENST00000463244 NBEAL2Q6ZNJ1 2754 aa17.09■□□□□ 0.33
CPSF7-209ENST00000463244 TRBV4-1A0A0J9YWV2 114 aa17.09■□□□□ 0.33
CPSF7-209ENST00000463244 M0R135 149 aa17.09■□□□□ 0.33
CPSF7-209ENST00000463244 DVL1O14640 695 aa17.09■□□□□ 0.33
CPSF7-209ENST00000463244 GSTA4O15217 222 aa17.09■□□□□ 0.33
CPSF7-209ENST00000463244 GGT2P36268 569 aa17.09■□□□□ 0.33
CPSF7-209ENST00000463244 TPTEP56180 551 aa17.09■□□□□ 0.33
CPSF7-209ENST00000463244 SEC23BQ15437 767 aa17.09■□□□□ 0.33
CPSF7-209ENST00000463244 SLC36A3Q495N2 470 aa17.09■□□□□ 0.33
CPSF7-209ENST00000463244 ZBTB46Q86UZ6 589 aa17.09■□□□□ 0.33
CPSF7-209ENST00000463244 GCSAMQ8N6F7 178 aa17.09■□□□□ 0.33
CPSF7-209ENST00000463244 OR2AJ1Q8NGZ0 328 aa17.09■□□□□ 0.33
CPSF7-209ENST00000463244 RCN3Q96D15 328 aa17.09■□□□□ 0.33
CPSF7-209ENST00000463244 ZNF799Q96GE5 643 aa17.09■□□□□ 0.33
CPSF7-209ENST00000463244 ERMAPQ96PL5 475 aaPredicted RBP17.09■□□□□ 0.33
CPSF7-209ENST00000463244 C1orf123Q9NWV4 160 aa17.09■□□□□ 0.33
CPSF7-209ENST00000463244 MRPL15Q9P015 296 aaKnown RBP17.09■□□□□ 0.33
CPSF7-209ENST00000463244 KAAG1Q9UBP8 84 aa17.09■□□□□ 0.33
CPSF7-209ENST00000463244 RPUSD1Q9UJJ7 312 aaKnown RBP17.09■□□□□ 0.33
CPSF7-209ENST00000463244 KPTNQ9Y664 436 aa17.09■□□□□ 0.33
CPSF7-209ENST00000463244 C5orf63A6NC05 138 aa17.08■□□□□ 0.32
CPSF7-209ENST00000463244 TSPAN9O75954 239 aa17.08■□□□□ 0.32
CPSF7-209ENST00000463244 ZNF92Q03936 586 aa17.08■□□□□ 0.32
CPSF7-209ENST00000463244 SNAI3Q3KNW1 292 aa17.08■□□□□ 0.32
CPSF7-209ENST00000463244 CDONQ4KMG0 1287 aa17.08■□□□□ 0.32
CPSF7-209ENST00000463244 DHRS7BQ6IAN0 325 aaPredicted RBP17.08■□□□□ 0.32
CPSF7-209ENST00000463244 ZNF826PQ6ZT77 177 aa17.08■□□□□ 0.32
CPSF7-209ENST00000463244 VMO1Q7Z5L0 202 aa17.08■□□□□ 0.32
CPSF7-209ENST00000463244 MAP6Q96JE9 813 aa17.08■□□□□ 0.32
CPSF7-209ENST00000463244 CNTD2Q9H8S5 307 aa17.08■□□□□ 0.32
CPSF7-209ENST00000463244 RPRD1BQ9NQG5 326 aaKnown RBP17.08■□□□□ 0.32
CPSF7-209ENST00000463244 NDUFAF4Q9P032 175 aa17.08■□□□□ 0.32
CPSF7-209ENST00000463244 VPREB3Q9UKI3 123 aa17.08■□□□□ 0.32
CPSF7-209ENST00000463244 FAM96BQ9Y3D0 163 aa17.08■□□□□ 0.32
CPSF7-209ENST00000463244 PLXNB1O43157 2135 aa17.08■□□□□ 0.32
CPSF7-209ENST00000463244 A0A1B0GVI7 797 aa17.07■□□□□ 0.32
CPSF7-209ENST00000463244 NME4O00746 187 aa17.07■□□□□ 0.32
CPSF7-209ENST00000463244 ARPC3O15145 178 aa17.07■□□□□ 0.32
CPSF7-209ENST00000463244 RENP00797 406 aa17.07■□□□□ 0.32
CPSF7-209ENST00000463244 LHBP01229 141 aa17.07■□□□□ 0.32
CPSF7-209ENST00000463244 TROVE2P10155 538 aaKnown RBP eCLIP17.07■□□□□ 0.32
CPSF7-209ENST00000463244 HIST1H1CP16403 213 aaKnown RBP17.07■□□□□ 0.32
CPSF7-209ENST00000463244 RHCEP18577 417 aa17.07■□□□□ 0.32
CPSF7-209ENST00000463244 ANOS1P23352 680 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 99.4 ms