RNA–Protein interactions for RNA: ENST00000463230.5

R3HDM1-213, Transcript of R3H domain containing 1, humanhuman

TSL 2

Gene R3HDM1, Length 2,241 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-213ENST00000463230 CELF2-AS1Q8N7Q2 184 aa11.09□□□□□ -0.63
R3HDM1-213ENST00000463230 BBS1Q8NFJ9 593 aa11.09□□□□□ -0.63
R3HDM1-213ENST00000463230 RAB1CQ92928 201 aa11.09□□□□□ -0.63
R3HDM1-213ENST00000463230 RGCCQ9H4X1 137 aa11.09□□□□□ -0.63
R3HDM1-213ENST00000463230 LYNX1G3V0Z9 82 aa11.08□□□□□ -0.64
R3HDM1-213ENST00000463230 PHYHO14832 338 aa11.08□□□□□ -0.64
R3HDM1-213ENST00000463230 SELENOFO60613 162 aa11.08□□□□□ -0.64
R3HDM1-213ENST00000463230 LYNX1P0DP58 116 aa11.08□□□□□ -0.64
R3HDM1-213ENST00000463230 ALOX5APP20292 161 aa11.08□□□□□ -0.64
R3HDM1-213ENST00000463230 VAMP1P23763 118 aa11.08□□□□□ -0.64
R3HDM1-213ENST00000463230 DDOSTP39656 456 aa11.08□□□□□ -0.64
R3HDM1-213ENST00000463230 CX3CR1P49238 355 aa11.08□□□□□ -0.64
R3HDM1-213ENST00000463230 SRP9P49458 86 aaKnown RBP11.08□□□□□ -0.64
R3HDM1-213ENST00000463230 C6orf52Q5T4I8 152 aa11.08□□□□□ -0.64
R3HDM1-213ENST00000463230 OR2T2Q6IF00 324 aa11.08□□□□□ -0.64
R3HDM1-213ENST00000463230 OR2Z1Q8NG97 314 aa11.08□□□□□ -0.64
R3HDM1-213ENST00000463230 OR8J1Q8NGP2 316 aa11.08□□□□□ -0.64
R3HDM1-213ENST00000463230 TRUB1Q8WWH5 349 aaKnown RBP11.08□□□□□ -0.64
R3HDM1-213ENST00000463230 CNN2Q99439 309 aaKnown RBP11.08□□□□□ -0.64
R3HDM1-213ENST00000463230 TMEM100Q9NV29 134 aa11.08□□□□□ -0.64
R3HDM1-213ENST00000463230 WARS2Q9UGM6 360 aaKnown RBP11.08□□□□□ -0.64
R3HDM1-213ENST00000463230 ZNF391Q9UJN7 358 aa11.08□□□□□ -0.64
R3HDM1-213ENST00000463230 LAMP5Q9UJQ1 280 aa11.08□□□□□ -0.64
R3HDM1-213ENST00000463230 HIVEP2P31629 2446 aa11.08□□□□□ -0.64
R3HDM1-213ENST00000463230 ABCA1O95477 2261 aa11.08□□□□□ -0.64
R3HDM1-213ENST00000463230 PPIHO43447 177 aaKnown RBP11.08□□□□□ -0.64
R3HDM1-213ENST00000463230 ZNF254O75437 659 aa11.08□□□□□ -0.64
R3HDM1-213ENST00000463230 DCTDP32321 178 aa11.08□□□□□ -0.64
R3HDM1-213ENST00000463230 PRKXP51817 358 aa11.08□□□□□ -0.64
R3HDM1-213ENST00000463230 CDC42P60953 191 aa11.08□□□□□ -0.64
R3HDM1-213ENST00000463230 POU4F2Q12837 409 aa11.08□□□□□ -0.64
R3HDM1-213ENST00000463230 PEG10Q86TG7 708 aaKnown RBP11.08□□□□□ -0.64
R3HDM1-213ENST00000463230 NAA40Q86UY6 237 aa11.08□□□□□ -0.64
R3HDM1-213ENST00000463230 HIST2H2ABQ8IUE6 130 aaPredicted RBP11.08□□□□□ -0.64
R3HDM1-213ENST00000463230 TCEANCQ8N8B7 351 aa11.08□□□□□ -0.64
R3HDM1-213ENST00000463230 OR10A2Q9H208 303 aa11.08□□□□□ -0.64
R3HDM1-213ENST00000463230 RIBC2Q9H4K1 309 aa11.08□□□□□ -0.64
R3HDM1-213ENST00000463230 NSD1Q96L73 2696 aaPredicted RBP11.07□□□□□ -0.64
R3HDM1-213ENST00000463230 A8MV72 311 aaPredicted RBP11.07□□□□□ -0.64
R3HDM1-213ENST00000463230 CPT2P23786 658 aa11.07□□□□□ -0.64
R3HDM1-213ENST00000463230 EPHA2P29317 976 aa11.07□□□□□ -0.64
R3HDM1-213ENST00000463230 PSMA6P60900 246 aaKnown RBP11.07□□□□□ -0.64
R3HDM1-213ENST00000463230 ROM1Q03395 351 aa11.07□□□□□ -0.64
R3HDM1-213ENST00000463230 MZT1Q08AG7 82 aa11.07□□□□□ -0.64
R3HDM1-213ENST00000463230 SNAI3Q3KNW1 292 aa11.07□□□□□ -0.64
R3HDM1-213ENST00000463230 GLYATL3Q5SZD4 288 aa11.07□□□□□ -0.64
R3HDM1-213ENST00000463230 PQLC1Q8N2U9 271 aa11.07□□□□□ -0.64
R3HDM1-213ENST00000463230 THEM6Q8WUY1 208 aa11.07□□□□□ -0.64
R3HDM1-213ENST00000463230 SPRYD4Q8WW59 207 aaPredicted RBP11.07□□□□□ -0.64
R3HDM1-213ENST00000463230 STMN2Q93045 179 aa11.07□□□□□ -0.64
R3HDM1-213ENST00000463230 ERGIC1Q969X5 290 aa11.07□□□□□ -0.64
R3HDM1-213ENST00000463230 YAE1D1Q9NRH1 226 aa11.07□□□□□ -0.64
R3HDM1-213ENST00000463230 MRPL15Q9P015 296 aaKnown RBP11.07□□□□□ -0.64
R3HDM1-213ENST00000463230 LPAR3Q9UBY5 353 aa11.07□□□□□ -0.64
R3HDM1-213ENST00000463230 CSPG4Q6UVK1 2322 aa11.07□□□□□ -0.64
R3HDM1-213ENST00000463230 CD300LBA8K4G0 201 aa11.07□□□□□ -0.64
R3HDM1-213ENST00000463230 E9PQ18 207 aa11.07□□□□□ -0.64
R3HDM1-213ENST00000463230 EI24O14681 340 aa11.07□□□□□ -0.64
R3HDM1-213ENST00000463230 GMDSO60547 372 aa11.07□□□□□ -0.64
R3HDM1-213ENST00000463230 FSTL3O95633 263 aa11.07□□□□□ -0.64
R3HDM1-213ENST00000463230 NAA10P41227 235 aaPredicted RBP11.07□□□□□ -0.64
R3HDM1-213ENST00000463230 GATA4P43694 442 aa11.07□□□□□ -0.64
R3HDM1-213ENST00000463230 ZNF92Q03936 586 aa11.07□□□□□ -0.64
R3HDM1-213ENST00000463230 ZNF181Q2M3W8 571 aa11.07□□□□□ -0.64
R3HDM1-213ENST00000463230 KRTAP21-3Q3LHN1 58 aa11.07□□□□□ -0.64
R3HDM1-213ENST00000463230 SLC25A30Q5SVS4 291 aa11.07□□□□□ -0.64
R3HDM1-213ENST00000463230 FAM166AQ6J272 317 aa11.07□□□□□ -0.64
R3HDM1-213ENST00000463230 PRSS45Q7RTY3 260 aa11.07□□□□□ -0.64
R3HDM1-213ENST00000463230 OR5AS1Q8N127 324 aa11.07□□□□□ -0.64
R3HDM1-213ENST00000463230 SPERTQ8NA61 448 aa11.07□□□□□ -0.64
R3HDM1-213ENST00000463230 RFKQ969G6 155 aa11.07□□□□□ -0.64
R3HDM1-213ENST00000463230 HRASLS5Q96KN8 279 aa11.07□□□□□ -0.64
R3HDM1-213ENST00000463230 ZNF469Q96JG9 3925 aaPredicted RBP11.06□□□□□ -0.64
R3HDM1-213ENST00000463230 GGT3PA6NGU5 568 aa11.06□□□□□ -0.64
R3HDM1-213ENST00000463230 CDC14BO60729 498 aa11.06□□□□□ -0.64
R3HDM1-213ENST00000463230 HOXB4P17483 251 aaPredicted RBP11.06□□□□□ -0.64
R3HDM1-213ENST00000463230 PCMT1P22061 227 aa11.06□□□□□ -0.64
R3HDM1-213ENST00000463230 CD200P41217 278 aa11.06□□□□□ -0.64
R3HDM1-213ENST00000463230 CDH15P55291 814 aa11.06□□□□□ -0.64
R3HDM1-213ENST00000463230 BRICD5Q6PL45 260 aa11.06□□□□□ -0.64
R3HDM1-213ENST00000463230 Q71RC1 249 aaPredicted RBP11.06□□□□□ -0.64
R3HDM1-213ENST00000463230 KRT77Q7Z794 578 aa11.06□□□□□ -0.64
R3HDM1-213ENST00000463230 LINC01356Q8N9X3 169 aa11.06□□□□□ -0.64
R3HDM1-213ENST00000463230 CLDND2Q8NHS1 167 aa11.06□□□□□ -0.64
R3HDM1-213ENST00000463230 RAB39BQ96DA2 213 aa11.06□□□□□ -0.64
R3HDM1-213ENST00000463230 MEGF10Q96KG7 1140 aa11.06□□□□□ -0.64
R3HDM1-213ENST00000463230 OR2V2Q96R30 315 aa11.06□□□□□ -0.64
R3HDM1-213ENST00000463230 AMELYQ99218 206 aa11.06□□□□□ -0.64
R3HDM1-213ENST00000463230 ABCB9Q9NP78 766 aa11.06□□□□□ -0.64
R3HDM1-213ENST00000463230 C8orf4Q9NR00 106 aa11.06□□□□□ -0.64
R3HDM1-213ENST00000463230 C2CD3Q4AC94 2353 aa11.06□□□□□ -0.64
R3HDM1-213ENST00000463230 ANXA2P07355 339 aaKnown RBP11.05□□□□□ -0.64
R3HDM1-213ENST00000463230 HTR1FP30939 366 aa11.05□□□□□ -0.64
R3HDM1-213ENST00000463230 ZNF121P58317 390 aaPredicted RBP11.05□□□□□ -0.64
R3HDM1-213ENST00000463230 TIGD6Q17RP2 521 aa11.05□□□□□ -0.64
R3HDM1-213ENST00000463230 SPATC1Q76KD6 591 aa11.05□□□□□ -0.64
R3HDM1-213ENST00000463230 CBR4Q8N4T8 237 aa11.05□□□□□ -0.64
R3HDM1-213ENST00000463230 ITLN1Q8WWA0 313 aa11.05□□□□□ -0.64
R3HDM1-213ENST00000463230 TMEM106BQ9NUM4 274 aa11.05□□□□□ -0.64
R3HDM1-213ENST00000463230 CLN6Q9NWW5 311 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms