RNA–Protein interactions for RNA: ENST00000462276.1

RTF1-202, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 4

Gene RTF1, Length 485 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-202ENST00000462276 FAM57BQ71RH2 274 aa9.24□□□□□ -0.93
RTF1-202ENST00000462276 DOK3Q7L591 496 aa9.24□□□□□ -0.93
RTF1-202ENST00000462276 WFDC8Q8IUA0 241 aa9.24□□□□□ -0.93
RTF1-202ENST00000462276 PRSS35Q8N3Z0 413 aa9.24□□□□□ -0.93
RTF1-202ENST00000462276 SLC7A6Q92536 515 aa9.24□□□□□ -0.93
RTF1-202ENST00000462276 SPSB4Q96A44 273 aa9.24□□□□□ -0.93
RTF1-202ENST00000462276 MS4A3Q96HJ5 214 aa9.24□□□□□ -0.93
RTF1-202ENST00000462276 PGLYRP3Q96LB9 341 aa9.24□□□□□ -0.93
RTF1-202ENST00000462276 C1QTNF6Q9BXI9 259 aa9.24□□□□□ -0.93
RTF1-202ENST00000462276 GTF2A1LQ9UNN4 478 aa9.24□□□□□ -0.93
RTF1-202ENST00000462276 SLC22A13Q9Y226 551 aa9.24□□□□□ -0.93
RTF1-202ENST00000462276 GSTK1Q9Y2Q3 226 aa9.24□□□□□ -0.93
RTF1-202ENST00000462276 SIRT4Q9Y6E7 314 aaPredicted RBP9.24□□□□□ -0.93
RTF1-202ENST00000462276 SPTAN1Q13813 2472 aaKnown RBP9.24□□□□□ -0.93
RTF1-202ENST00000462276 IGHV2OR16-5A0A0B4J2B6 119 aa9.23□□□□□ -0.93
RTF1-202ENST00000462276 TRDV1A0A1B0GX56 115 aa9.23□□□□□ -0.93
RTF1-202ENST00000462276 CLEC18AA5D8T8 446 aa9.23□□□□□ -0.93
RTF1-202ENST00000462276 ZNF701M0R085 212 aaPredicted RBP9.23□□□□□ -0.93
RTF1-202ENST00000462276 M0R1B8 84 aa9.23□□□□□ -0.93
RTF1-202ENST00000462276 ATE1O95260 518 aa9.23□□□□□ -0.93
RTF1-202ENST00000462276 IGLV3-1P01715 115 aa9.23□□□□□ -0.93
RTF1-202ENST00000462276 TTRP02766 147 aa9.23□□□□□ -0.93
RTF1-202ENST00000462276 CD2P06729 351 aa9.23□□□□□ -0.93
RTF1-202ENST00000462276 SELEP16581 610 aa9.23□□□□□ -0.93
RTF1-202ENST00000462276 IGFBP2P18065 325 aa9.23□□□□□ -0.93
RTF1-202ENST00000462276 NR4A1P22736 598 aa9.23□□□□□ -0.93
RTF1-202ENST00000462276 FGF9P31371 208 aaPredicted RBP9.23□□□□□ -0.93
RTF1-202ENST00000462276 KIR3DL2P43630 455 aa9.23□□□□□ -0.93
RTF1-202ENST00000462276 TMBIM6P55061 237 aa9.23□□□□□ -0.93
RTF1-202ENST00000462276 MFGE8Q08431 387 aaPredicted RBP9.23□□□□□ -0.93
RTF1-202ENST00000462276 CDSNQ15517 529 aa9.23□□□□□ -0.93
RTF1-202ENST00000462276 SSX1Q16384 188 aa9.23□□□□□ -0.93
RTF1-202ENST00000462276 ZBTB37Q5TC79 503 aa9.23□□□□□ -0.93
RTF1-202ENST00000462276 CLEC18BQ6UXF7 455 aa9.23□□□□□ -0.93
RTF1-202ENST00000462276 ANKRD13BQ86YJ7 626 aa9.23□□□□□ -0.93
RTF1-202ENST00000462276 FTMTQ8N4E7 242 aa9.23□□□□□ -0.93
RTF1-202ENST00000462276 PLPP7Q8NBV4 271 aa9.23□□□□□ -0.93
RTF1-202ENST00000462276 CLEC18CQ8NCF0 446 aa9.23□□□□□ -0.93
RTF1-202ENST00000462276 NUP37Q8NFH4 326 aa9.23□□□□□ -0.93
RTF1-202ENST00000462276 OR8B12Q8NGG6 310 aa9.23□□□□□ -0.93
RTF1-202ENST00000462276 ZNF420Q8TAQ5 688 aaPredicted RBP9.23□□□□□ -0.93
RTF1-202ENST00000462276 ABHD4Q8TB40 342 aa9.23□□□□□ -0.93
RTF1-202ENST00000462276 YIPF6Q96EC8 236 aa9.23□□□□□ -0.93
RTF1-202ENST00000462276 SPOCK3Q9BQ16 436 aa9.23□□□□□ -0.93
RTF1-202ENST00000462276 PDCD1LG2Q9BQ51 273 aa9.23□□□□□ -0.93
RTF1-202ENST00000462276 REPIN1Q9BWE0 567 aaKnown RBP9.23□□□□□ -0.93
RTF1-202ENST00000462276 FAM192AQ9GZU8 254 aa9.23□□□□□ -0.93
RTF1-202ENST00000462276 BRD7Q9NPI1 651 aa9.23□□□□□ -0.93
RTF1-202ENST00000462276 NPDC1Q9NQX5 325 aaPredicted RBP9.23□□□□□ -0.93
RTF1-202ENST00000462276 NPAP1Q9NZP6 1156 aa9.23□□□□□ -0.93
RTF1-202ENST00000462276 STUB1Q9UNE7 303 aa9.23□□□□□ -0.93
RTF1-202ENST00000462276 SSR3Q9UNL2 185 aa9.23□□□□□ -0.93
RTF1-202ENST00000462276 SF3B6Q9Y3B4 125 aaKnown RBP9.23□□□□□ -0.93
RTF1-202ENST00000462276 NCOA6Q14686 2063 aaPredicted RBP9.23□□□□□ -0.93
RTF1-202ENST00000462276 HECTD1Q9ULT8 2610 aa9.22□□□□□ -0.93
RTF1-202ENST00000462276 ADGRG4Q8IZF6 3080 aa9.22□□□□□ -0.93
RTF1-202ENST00000462276 TBX1O43435 398 aa9.22□□□□□ -0.93
RTF1-202ENST00000462276 SYT7O43581 403 aa9.22□□□□□ -0.93
RTF1-202ENST00000462276 SMPD2O60906 423 aa9.22□□□□□ -0.93
RTF1-202ENST00000462276 NOL3O60936 208 aaKnown RBP9.22□□□□□ -0.93
RTF1-202ENST00000462276 ARL6IP5O75915 188 aa9.22□□□□□ -0.93
RTF1-202ENST00000462276 CELA3BP08861 270 aa9.22□□□□□ -0.93
RTF1-202ENST00000462276 SLC2A1P11166 492 aa9.22□□□□□ -0.93
RTF1-202ENST00000462276 RAC2P15153 192 aa9.22□□□□□ -0.93
RTF1-202ENST00000462276 GLRXP35754 106 aa9.22□□□□□ -0.93
RTF1-202ENST00000462276 WNT5AP41221 380 aa9.22□□□□□ -0.93
RTF1-202ENST00000462276 MAP2K3P46734 347 aa9.22□□□□□ -0.93
RTF1-202ENST00000462276 SELENOVP59797 346 aa9.22□□□□□ -0.93
RTF1-202ENST00000462276 PPP1CBP62140 327 aa9.22□□□□□ -0.93
RTF1-202ENST00000462276 DAZAP2Q15038 168 aaPredicted RBP9.22□□□□□ -0.93
RTF1-202ENST00000462276 MOGQ16653 247 aa9.22□□□□□ -0.93
RTF1-202ENST00000462276 Q499Y3 187 aa9.22□□□□□ -0.93
RTF1-202ENST00000462276 NCMAPQ5T1S8 102 aa9.22□□□□□ -0.93
RTF1-202ENST00000462276 UNQ9370/PRO34162Q6UXP9 181 aa9.22□□□□□ -0.93
RTF1-202ENST00000462276 FBXW12Q6X9E4 464 aa9.22□□□□□ -0.93
RTF1-202ENST00000462276 C22orf34Q6ZV56 151 aa9.22□□□□□ -0.93
RTF1-202ENST00000462276 KRT74Q7RTS7 529 aa9.22□□□□□ -0.93
RTF1-202ENST00000462276 NAA40Q86UY6 237 aa9.22□□□□□ -0.93
RTF1-202ENST00000462276 DMRTC2Q8IXT2 367 aaPredicted RBP9.22□□□□□ -0.93
RTF1-202ENST00000462276 ZFP41Q8N8Y5 198 aa9.22□□□□□ -0.93
RTF1-202ENST00000462276 ACBD4Q8NC06 268 aa9.22□□□□□ -0.93
RTF1-202ENST00000462276 OR51E1Q8TCB6 317 aa9.22□□□□□ -0.93
RTF1-202ENST00000462276 RAB2BQ8WUD1 216 aa9.22□□□□□ -0.93
RTF1-202ENST00000462276 SGK3Q96BR1 496 aa9.22□□□□□ -0.93
RTF1-202ENST00000462276 FUNDC2Q9BWH2 189 aa9.22□□□□□ -0.93
RTF1-202ENST00000462276 GPR84Q9NQS5 396 aa9.22□□□□□ -0.93
RTF1-202ENST00000462276 STARD10Q9Y365 291 aa9.22□□□□□ -0.93
RTF1-202ENST00000462276 LRRK2Q5S007 2527 aa9.22□□□□□ -0.93
RTF1-202ENST00000462276 USP9XQ93008 2570 aaPredicted RBP9.21□□□□□ -0.93
RTF1-202ENST00000462276 UBR5O95071 2799 aaPredicted RBP9.21□□□□□ -0.93
RTF1-202ENST00000462276 TRBV5-5A0A0J9YX44 114 aa9.21□□□□□ -0.94
RTF1-202ENST00000462276 A0A1B0GTI1 187 aa9.21□□□□□ -0.94
RTF1-202ENST00000462276 LOC107986453A0A1B0GWG9 222 aa9.21□□□□□ -0.94
RTF1-202ENST00000462276 DPRXA6NFQ7 191 aa9.21□□□□□ -0.94
RTF1-202ENST00000462276 ZNF879B4DU55 563 aa9.21□□□□□ -0.94
RTF1-202ENST00000462276 AIREO43918 545 aa9.21□□□□□ -0.94
RTF1-202ENST00000462276 SC5DO75845 299 aa9.21□□□□□ -0.94
RTF1-202ENST00000462276 DHRS3O75911 302 aa9.21□□□□□ -0.94
RTF1-202ENST00000462276 RGS9O75916 674 aaPredicted RBP9.21□□□□□ -0.94
RTF1-202ENST00000462276 CD3EP07766 207 aa9.21□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms