RNA–Protein interactions for RNA: ENST00000462198.5

SMARCC1-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 2

Gene SMARCC1, Length 785 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-204ENST00000462198 SFXN2Q96NB2 322 aa5.27□□□□□ -1.57
SMARCC1-204ENST00000462198 DCSTAMPQ9H295 470 aa5.27□□□□□ -1.57
SMARCC1-204ENST00000462198 FN3KQ9H479 309 aa5.27□□□□□ -1.57
SMARCC1-204ENST00000462198 ANKRD19PQ9H560 264 aa5.27□□□□□ -1.57
SMARCC1-204ENST00000462198 SPACA1Q9HBV2 294 aa5.27□□□□□ -1.57
SMARCC1-204ENST00000462198 RANGRFQ9HD47 186 aaPredicted RBP5.27□□□□□ -1.57
SMARCC1-204ENST00000462198 EXOSC3Q9NQT5 275 aaKnown RBP5.27□□□□□ -1.57
SMARCC1-204ENST00000462198 MED17Q9NVC6 651 aa5.27□□□□□ -1.57
SMARCC1-204ENST00000462198 RLIMQ9NVW2 624 aa5.27□□□□□ -1.57
SMARCC1-204ENST00000462198 KLHL28Q9NXS3 571 aa5.27□□□□□ -1.57
SMARCC1-204ENST00000462198 SCN3BQ9NY72 215 aa5.27□□□□□ -1.57
SMARCC1-204ENST00000462198 ZNF226Q9NYT6 803 aa5.27□□□□□ -1.57
SMARCC1-204ENST00000462198 SLC6A5Q9Y345 797 aa5.27□□□□□ -1.57
SMARCC1-204ENST00000462198 MRPS18CQ9Y3D5 142 aaKnown RBP5.27□□□□□ -1.57
SMARCC1-204ENST00000462198 TRRAPQ9Y4A5 3859 aa5.27□□□□□ -1.57
SMARCC1-204ENST00000462198 OR2M5A3KFT3 312 aa5.26□□□□□ -1.57
SMARCC1-204ENST00000462198 RFPL4AA6NLU0 287 aa5.26□□□□□ -1.57
SMARCC1-204ENST00000462198 GJE1A6NN92 205 aa5.26□□□□□ -1.57
SMARCC1-204ENST00000462198 A8MXK9 166 aa5.26□□□□□ -1.57
SMARCC1-204ENST00000462198 PTGES3LE9PB15 166 aa5.26□□□□□ -1.57
SMARCC1-204ENST00000462198 RFPL4AL1F8VTS6 287 aa5.26□□□□□ -1.57
SMARCC1-204ENST00000462198 RGS10O43665 173 aa5.26□□□□□ -1.57
SMARCC1-204ENST00000462198 ZIC3O60481 467 aa5.26□□□□□ -1.57
SMARCC1-204ENST00000462198 LMX1BO60663 402 aa5.26□□□□□ -1.57
SMARCC1-204ENST00000462198 WBP4O75554 376 aaKnown RBP5.26□□□□□ -1.57
SMARCC1-204ENST00000462198 GCM2O75603 506 aaPredicted RBP5.26□□□□□ -1.57
SMARCC1-204ENST00000462198 KRT33AO76009 404 aa5.26□□□□□ -1.57
SMARCC1-204ENST00000462198 ZNF682O95780 498 aa5.26□□□□□ -1.57
SMARCC1-204ENST00000462198 LALBAP00709 142 aa5.26□□□□□ -1.57
SMARCC1-204ENST00000462198 MT-ND1P03886 318 aa5.26□□□□□ -1.57
SMARCC1-204ENST00000462198 MT-ND2P03891 347 aa5.26□□□□□ -1.57
SMARCC1-204ENST00000462198 SEMG1P04279 462 aa5.26□□□□□ -1.57
SMARCC1-204ENST00000462198 QDPRP09417 244 aa5.26□□□□□ -1.57
SMARCC1-204ENST00000462198 CD36P16671 472 aa5.26□□□□□ -1.57
SMARCC1-204ENST00000462198 ZNF17P17021 662 aa5.26□□□□□ -1.57
SMARCC1-204ENST00000462198 CRYGSP22914 178 aa5.26□□□□□ -1.57
SMARCC1-204ENST00000462198 CRABP1P29762 137 aa5.26□□□□□ -1.57
SMARCC1-204ENST00000462198 KDELR2P33947 212 aa5.26□□□□□ -1.57
SMARCC1-204ENST00000462198 MAP2K4P45985 399 aa5.26□□□□□ -1.57
SMARCC1-204ENST00000462198 IDH2P48735 452 aaKnown RBP5.26□□□□□ -1.57
SMARCC1-204ENST00000462198 RGS8P57771 180 aaPredicted RBP5.26□□□□□ -1.57
SMARCC1-204ENST00000462198 SRYQ05066 204 aa5.26□□□□□ -1.57
SMARCC1-204ENST00000462198 FOXF1Q12946 379 aa5.26□□□□□ -1.57
SMARCC1-204ENST00000462198 DYRK1AQ13627 763 aa5.26□□□□□ -1.57
SMARCC1-204ENST00000462198 IRF3Q14653 427 aa5.26□□□□□ -1.57
SMARCC1-204ENST00000462198 MAD2L1BPQ15013 274 aaPredicted RBP5.26□□□□□ -1.57
SMARCC1-204ENST00000462198 TOMM34Q15785 309 aaPredicted RBP5.26□□□□□ -1.57
SMARCC1-204ENST00000462198 TMEM249Q2WGJ8 235 aa5.26□□□□□ -1.57
SMARCC1-204ENST00000462198 PLPPR5Q32ZL2 321 aa5.26□□□□□ -1.57
SMARCC1-204ENST00000462198 MIDNQ504T8 468 aa5.26□□□□□ -1.57
SMARCC1-204ENST00000462198 PAN3Q58A45 887 aaKnown RBP5.26□□□□□ -1.57
SMARCC1-204ENST00000462198 TMEM236Q5W0B7 351 aa5.26□□□□□ -1.57
SMARCC1-204ENST00000462198 NSUN5P2Q63ZY6 315 aa5.26□□□□□ -1.57
SMARCC1-204ENST00000462198 RPL13AP3Q6NVV1 102 aa5.26□□□□□ -1.57
SMARCC1-204ENST00000462198 FAHD1Q6P587 224 aa5.26□□□□□ -1.57
SMARCC1-204ENST00000462198 IL17RELQ6ZVW7 336 aa5.26□□□□□ -1.57
SMARCC1-204ENST00000462198 CHMP1BQ7LBR1 199 aa5.26□□□□□ -1.57
SMARCC1-204ENST00000462198 SHFQ7M4L6 423 aa5.26□□□□□ -1.57
SMARCC1-204ENST00000462198 SLC46A3Q7Z3Q1 461 aa5.26□□□□□ -1.57
SMARCC1-204ENST00000462198 DPPA2Q7Z7J5 298 aa5.26□□□□□ -1.57
SMARCC1-204ENST00000462198 CYP4Z1Q86W10 505 aa5.26□□□□□ -1.57
SMARCC1-204ENST00000462198 GLB1L2Q8IW92 636 aa5.26□□□□□ -1.57
SMARCC1-204ENST00000462198 SPAG16Q8N0X2 631 aa5.26□□□□□ -1.57
SMARCC1-204ENST00000462198 YIPF7Q8N8F6 280 aa5.26□□□□□ -1.57
SMARCC1-204ENST00000462198 OR6X1Q8NH79 312 aa5.26□□□□□ -1.57
SMARCC1-204ENST00000462198 AKR7LQ8NHP1 331 aa5.26□□□□□ -1.57
SMARCC1-204ENST00000462198 NANPQ8TBE9 248 aa5.26□□□□□ -1.57
SMARCC1-204ENST00000462198 GPR119Q8TDV5 335 aa5.26□□□□□ -1.57
SMARCC1-204ENST00000462198 ST8SIA1Q92185 356 aa5.26□□□□□ -1.57
SMARCC1-204ENST00000462198 ZC3HAV1LQ96H79 300 aaKnown RBP5.26□□□□□ -1.57
SMARCC1-204ENST00000462198 PFDN5Q99471 154 aa5.26□□□□□ -1.57
SMARCC1-204ENST00000462198 SEPHS2Q99611 448 aa5.26□□□□□ -1.57
SMARCC1-204ENST00000462198 HDHD5Q9BXW7 423 aa5.26□□□□□ -1.57
SMARCC1-204ENST00000462198 ZNF436Q9C0F3 470 aaPredicted RBP5.26□□□□□ -1.57
SMARCC1-204ENST00000462198 SLCO5A1Q9H2Y9 848 aa5.26□□□□□ -1.57
SMARCC1-204ENST00000462198 RNF121Q9H920 327 aa5.26□□□□□ -1.57
SMARCC1-204ENST00000462198 NIT2Q9NQR4 276 aa5.26□□□□□ -1.57
SMARCC1-204ENST00000462198 SDHAF2Q9NX18 166 aa5.26□□□□□ -1.57
SMARCC1-204ENST00000462198 RPS6KB2Q9UBS0 482 aa5.26□□□□□ -1.57
SMARCC1-204ENST00000462198 SEC14L4Q9UDX3 406 aa5.26□□□□□ -1.57
SMARCC1-204ENST00000462198 MIOXQ9UGB7 285 aa5.26□□□□□ -1.57
SMARCC1-204ENST00000462198 STUB1Q9UNE7 303 aa5.26□□□□□ -1.57
SMARCC1-204ENST00000462198 CAMK2AQ9UQM7 478 aa5.26□□□□□ -1.57
SMARCC1-204ENST00000462198 CHST2Q9Y4C5 530 aa5.26□□□□□ -1.57
SMARCC1-204ENST00000462198 TNFSF12-TNFSF13A0A0A6YY99 330 aa5.25□□□□□ -1.57
SMARCC1-204ENST00000462198 A0A1B0GVI7 797 aa5.25□□□□□ -1.57
SMARCC1-204ENST00000462198 MARCH11A6NNE9 402 aa5.25□□□□□ -1.57
SMARCC1-204ENST00000462198 A8MXE2 369 aa5.25□□□□□ -1.57
SMARCC1-204ENST00000462198 FAAHO00519 579 aa5.25□□□□□ -1.57
SMARCC1-204ENST00000462198 TCF21O43680 179 aa5.25□□□□□ -1.57
SMARCC1-204ENST00000462198 XPNPEP2O43895 674 aa5.25□□□□□ -1.57
SMARCC1-204ENST00000462198 ORC5O43913 435 aa5.25□□□□□ -1.57
SMARCC1-204ENST00000462198 PRKYO43930 277 aa5.25□□□□□ -1.57
SMARCC1-204ENST00000462198 TMEM127O75204 238 aa5.25□□□□□ -1.57
SMARCC1-204ENST00000462198 LGI1O95970 557 aa5.25□□□□□ -1.57
SMARCC1-204ENST00000462198 SERPINA1P01009 418 aa5.25□□□□□ -1.57
SMARCC1-204ENST00000462198 CST1P01037 141 aa5.25□□□□□ -1.57
SMARCC1-204ENST00000462198 LINC00614P0C842 121 aa5.25□□□□□ -1.57
SMARCC1-204ENST00000462198 TMIGD3P0DMS9 266 aaPredicted RBP5.25□□□□□ -1.57
SMARCC1-204ENST00000462198 PEPDP12955 493 aa5.25□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms