RNA–Protein interactions for RNA: ENST00000461798.5

BRCA1-207, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 3

Gene BRCA1, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-207ENST00000461798 OR2T5Q6IEZ7 315 aa7.67□□□□□ -1.18
BRCA1-207ENST00000461798 DRAM2Q6UX65 266 aa7.67□□□□□ -1.18
BRCA1-207ENST00000461798 C12orf54Q6X4T0 127 aa7.67□□□□□ -1.18
BRCA1-207ENST00000461798 PGAP1Q75T13 922 aa7.67□□□□□ -1.18
BRCA1-207ENST00000461798 C1orf87Q8N0U7 546 aa7.67□□□□□ -1.18
BRCA1-207ENST00000461798 ZDHHC22Q8N966 263 aa7.67□□□□□ -1.18
BRCA1-207ENST00000461798 CYB561A3Q8NBI2 242 aa7.67□□□□□ -1.18
BRCA1-207ENST00000461798 PLPP7Q8NBV4 271 aa7.67□□□□□ -1.18
BRCA1-207ENST00000461798 PROKR2Q8NFJ6 384 aa7.67□□□□□ -1.18
BRCA1-207ENST00000461798 OR10AD1Q8NGE0 317 aa7.67□□□□□ -1.18
BRCA1-207ENST00000461798 OR2T29Q8NH02 315 aa7.67□□□□□ -1.18
BRCA1-207ENST00000461798 ZNF420Q8TAQ5 688 aaPredicted RBP7.67□□□□□ -1.18
BRCA1-207ENST00000461798 ZNF799Q96GE5 643 aa7.67□□□□□ -1.18
BRCA1-207ENST00000461798 SLC6A7Q99884 636 aa7.67□□□□□ -1.18
BRCA1-207ENST00000461798 TMEM246Q9BRR3 403 aa7.67□□□□□ -1.18
BRCA1-207ENST00000461798 TSSK6Q9BXA6 273 aa7.67□□□□□ -1.18
BRCA1-207ENST00000461798 FN3KQ9H479 309 aa7.67□□□□□ -1.18
BRCA1-207ENST00000461798 WDR76Q9H967 626 aa7.67□□□□□ -1.18
BRCA1-207ENST00000461798 NTN4Q9HB63 628 aa7.67□□□□□ -1.18
BRCA1-207ENST00000461798 NUP50Q9UKX7 468 aa7.67□□□□□ -1.18
BRCA1-207ENST00000461798 PRPF19Q9UMS4 504 aaKnown RBP7.67□□□□□ -1.18
BRCA1-207ENST00000461798 PPIAL4AQ9Y536 164 aa7.67□□□□□ -1.18
BRCA1-207ENST00000461798 AUP1Q9Y679 476 aa7.67□□□□□ -1.18
BRCA1-207ENST00000461798 TANC2Q9HCD6 1990 aa7.67□□□□□ -1.18
BRCA1-207ENST00000461798 DYSFO75923 2080 aa7.67□□□□□ -1.18
BRCA1-207ENST00000461798 ARHGAP32A7KAX9 2087 aa7.66□□□□□ -1.18
BRCA1-207ENST00000461798 KIR2DS1A0A191URI9 304 aa7.66□□□□□ -1.18
BRCA1-207ENST00000461798 TVP23AA6NH52 213 aa7.66□□□□□ -1.18
BRCA1-207ENST00000461798 CD300LBA8K4G0 201 aa7.66□□□□□ -1.18
BRCA1-207ENST00000461798 GMDSO60547 372 aa7.66□□□□□ -1.18
BRCA1-207ENST00000461798 FAM107AO95990 144 aa7.66□□□□□ -1.18
BRCA1-207ENST00000461798 CYB5R3P00387 301 aaPredicted RBP7.66□□□□□ -1.18
BRCA1-207ENST00000461798 HLA-DPB1P04440 258 aa7.66□□□□□ -1.18
BRCA1-207ENST00000461798 CALB2P22676 271 aa7.66□□□□□ -1.18
BRCA1-207ENST00000461798 FMO3P31513 532 aa7.66□□□□□ -1.18
BRCA1-207ENST00000461798 ZNF92Q03936 586 aa7.66□□□□□ -1.18
BRCA1-207ENST00000461798 CRMP1Q14194 572 aa7.66□□□□□ -1.18
BRCA1-207ENST00000461798 FAM98BQ52LJ0 330 aaKnown RBP7.66□□□□□ -1.18
BRCA1-207ENST00000461798 LINC01590Q5TEZ4 76 aa7.66□□□□□ -1.18
BRCA1-207ENST00000461798 LRRN1Q6UXK5 716 aa7.66□□□□□ -1.18
BRCA1-207ENST00000461798 RHOUQ7L0Q8 258 aa7.66□□□□□ -1.18
BRCA1-207ENST00000461798 ZNF771Q7L3S4 317 aaPredicted RBP7.66□□□□□ -1.18
BRCA1-207ENST00000461798 DOK3Q7L591 496 aa7.66□□□□□ -1.18
BRCA1-207ENST00000461798 MOGAT3Q86VF5 341 aa7.66□□□□□ -1.18
BRCA1-207ENST00000461798 KLBQ86Z14 1044 aa7.66□□□□□ -1.18
BRCA1-207ENST00000461798 BPIFB2Q8N4F0 458 aa7.66□□□□□ -1.18
BRCA1-207ENST00000461798 SPERTQ8NA61 448 aa7.66□□□□□ -1.18
BRCA1-207ENST00000461798 AQP11Q8NBQ7 271 aa7.66□□□□□ -1.18
BRCA1-207ENST00000461798 BHLHE23Q8NDY6 225 aa7.66□□□□□ -1.18
BRCA1-207ENST00000461798 OR2T33Q8NG76 320 aa7.66□□□□□ -1.18
BRCA1-207ENST00000461798 OR4Q3Q8NH05 313 aa7.66□□□□□ -1.18
BRCA1-207ENST00000461798 SPRYD4Q8WW59 207 aaPredicted RBP7.66□□□□□ -1.18
BRCA1-207ENST00000461798 RAB40AQ8WXH6 277 aa7.66□□□□□ -1.18
BRCA1-207ENST00000461798 NEIL1Q96FI4 390 aaPredicted RBP7.66□□□□□ -1.18
BRCA1-207ENST00000461798 KCNJ15Q99712 375 aa7.66□□□□□ -1.18
BRCA1-207ENST00000461798 C1orf21Q9H246 121 aa7.66□□□□□ -1.18
BRCA1-207ENST00000461798 REEP1Q9H902 201 aa7.66□□□□□ -1.18
BRCA1-207ENST00000461798 ESM1Q9NQ30 184 aa7.66□□□□□ -1.18
BRCA1-207ENST00000461798 VNN3Q9NY84 501 aa7.66□□□□□ -1.18
BRCA1-207ENST00000461798 TAS2R1Q9NYW7 299 aa7.66□□□□□ -1.18
BRCA1-207ENST00000461798 OR5V1Q9UGF6 321 aa7.66□□□□□ -1.18
BRCA1-207ENST00000461798 NOP16Q9Y3C1 178 aaKnown RBP7.66□□□□□ -1.18
BRCA1-207ENST00000461798 SAMHD1Q9Y3Z3 626 aaKnown RBP7.66□□□□□ -1.18
BRCA1-207ENST00000461798 COMMD3-BMI1R4GMX3 469 aa7.66□□□□□ -1.18
BRCA1-207ENST00000461798 ARRDC5A6NEK1 342 aa7.65□□□□□ -1.18
BRCA1-207ENST00000461798 ZNF593O00488 134 aaPredicted RBP7.65□□□□□ -1.18
BRCA1-207ENST00000461798 ACOT8O14734 319 aa7.65□□□□□ -1.18
BRCA1-207ENST00000461798 TNFRSF13BO14836 293 aaPredicted RBP7.65□□□□□ -1.18
BRCA1-207ENST00000461798 ZNF205O95201 554 aa7.65□□□□□ -1.18
BRCA1-207ENST00000461798 IFNGP01579 166 aa7.65□□□□□ -1.18
BRCA1-207ENST00000461798 RAP2AP10114 183 aa7.65□□□□□ -1.18
BRCA1-207ENST00000461798 PSKH1P11801 424 aa7.65□□□□□ -1.18
BRCA1-207ENST00000461798 IRF2P14316 349 aa7.65□□□□□ -1.18
BRCA1-207ENST00000461798 RPS2P15880 293 aaKnown RBP7.65□□□□□ -1.18
BRCA1-207ENST00000461798 HOXB6P17509 224 aaKnown RBP7.65□□□□□ -1.18
BRCA1-207ENST00000461798 SPI1P17947 270 aa7.65□□□□□ -1.18
BRCA1-207ENST00000461798 CFPP27918 469 aa7.65□□□□□ -1.18
BRCA1-207ENST00000461798 DDOSTP39656 456 aa7.65□□□□□ -1.18
BRCA1-207ENST00000461798 PSMB10P40306 273 aa7.65□□□□□ -1.18
BRCA1-207ENST00000461798 RPS27P42677 84 aaKnown RBP7.65□□□□□ -1.18
BRCA1-207ENST00000461798 ENTPD1P49961 510 aa7.65□□□□□ -1.18
BRCA1-207ENST00000461798 UBA52P62987 128 aaKnown RBP7.65□□□□□ -1.18
BRCA1-207ENST00000461798 PPP1R8Q12972 351 aaKnown RBP7.65□□□□□ -1.18
BRCA1-207ENST00000461798 SNAI3Q3KNW1 292 aa7.65□□□□□ -1.18
BRCA1-207ENST00000461798 LYPD4Q6UWN0 246 aa7.65□□□□□ -1.18
BRCA1-207ENST00000461798 ZNF841Q6ZN19 808 aa7.65□□□□□ -1.18
BRCA1-207ENST00000461798 DCDC5Q6ZRR9 648 aa7.65□□□□□ -1.18
BRCA1-207ENST00000461798 C9orf139Q6ZV77 190 aa7.65□□□□□ -1.18
BRCA1-207ENST00000461798 MRPL21Q7Z2W9 205 aaKnown RBP7.65□□□□□ -1.18
BRCA1-207ENST00000461798 DCXRQ7Z4W1 244 aa7.65□□□□□ -1.18
BRCA1-207ENST00000461798 ZNF511Q8NB15 262 aa7.65□□□□□ -1.18
BRCA1-207ENST00000461798 CCDC197Q8NCU1 140 aa7.65□□□□□ -1.18
BRCA1-207ENST00000461798 OR51L1Q8NGJ5 315 aa7.65□□□□□ -1.18
BRCA1-207ENST00000461798 OR9Q1Q8NGQ5 310 aa7.65□□□□□ -1.18
BRCA1-207ENST00000461798 OR11L1Q8NGX0 322 aa7.65□□□□□ -1.18
BRCA1-207ENST00000461798 GCDHQ92947 438 aaPredicted RBP7.65□□□□□ -1.18
BRCA1-207ENST00000461798 SPSB4Q96A44 273 aa7.65□□□□□ -1.18
BRCA1-207ENST00000461798 UPRTQ96BW1 309 aa7.65□□□□□ -1.18
BRCA1-207ENST00000461798 SLAMF6Q96DU3 332 aa7.65□□□□□ -1.18
BRCA1-207ENST00000461798 ASB9Q96DX5 294 aa7.65□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms