RNA–Protein interactions for RNA: ENST00000460928.1

ATPAF1-203, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2

Gene ATPAF1, Length 869 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-203ENST00000460928 GOSR1O95249 250 aa4.24□□□□□ -1.73
ATPAF1-203ENST00000460928 NTN1O95631 604 aa4.24□□□□□ -1.73
ATPAF1-203ENST00000460928 ATP1B1P05026 303 aa4.24□□□□□ -1.73
ATPAF1-203ENST00000460928 FGF2P09038 288 aa4.24□□□□□ -1.73
ATPAF1-203ENST00000460928 CT45A8P0DMV1 189 aa4.24□□□□□ -1.73
ATPAF1-203ENST00000460928 CT45A9P0DMV2 189 aa4.24□□□□□ -1.73
ATPAF1-203ENST00000460928 CCL3P10147 92 aa4.24□□□□□ -1.73
ATPAF1-203ENST00000460928 IFI30P13284 250 aa4.24□□□□□ -1.73
ATPAF1-203ENST00000460928 PRPS1L1P21108 318 aa4.24□□□□□ -1.73
ATPAF1-203ENST00000460928 PAICSP22234 425 aaKnown RBP4.24□□□□□ -1.73
ATPAF1-203ENST00000460928 IGFBP5P24593 272 aa4.24□□□□□ -1.73
ATPAF1-203ENST00000460928 PTPN6P29350 595 aa4.24□□□□□ -1.73
ATPAF1-203ENST00000460928 NTSP30990 170 aa4.24□□□□□ -1.73
ATPAF1-203ENST00000460928 DCTDP32321 178 aa4.24□□□□□ -1.73
ATPAF1-203ENST00000460928 S100A3P33764 101 aa4.24□□□□□ -1.73
ATPAF1-203ENST00000460928 PIGAP37287 484 aa4.24□□□□□ -1.73
ATPAF1-203ENST00000460928 ERFP50548 548 aa4.24□□□□□ -1.73
ATPAF1-203ENST00000460928 FBXW4P57775 412 aa4.24□□□□□ -1.73
ATPAF1-203ENST00000460928 MLF1P58340 268 aa4.24□□□□□ -1.73
ATPAF1-203ENST00000460928 NUTF2P61970 127 aaKnown RBP4.24□□□□□ -1.73
ATPAF1-203ENST00000460928 PSPHP78330 225 aa4.24□□□□□ -1.73
ATPAF1-203ENST00000460928 MRPS34P82930 218 aaKnown RBP4.24□□□□□ -1.73
ATPAF1-203ENST00000460928 OC90Q02509 493 aaPredicted RBP4.24□□□□□ -1.73
ATPAF1-203ENST00000460928 FUT7Q11130 342 aa4.24□□□□□ -1.73
ATPAF1-203ENST00000460928 ZNF155Q12901 538 aaPredicted RBP4.24□□□□□ -1.73
ATPAF1-203ENST00000460928 IL18R1Q13478 541 aa4.24□□□□□ -1.73
ATPAF1-203ENST00000460928 CAMK2DQ13557 499 aa4.24□□□□□ -1.73
ATPAF1-203ENST00000460928 SERTAD2Q14140 314 aa4.24□□□□□ -1.73
ATPAF1-203ENST00000460928 DAZAP2Q15038 168 aaPredicted RBP4.24□□□□□ -1.73
ATPAF1-203ENST00000460928 EBPQ15125 230 aaKnown RBP4.24□□□□□ -1.73
ATPAF1-203ENST00000460928 ZNHIT3Q15649 155 aaPredicted RBP4.24□□□□□ -1.73
ATPAF1-203ENST00000460928 NEDD8Q15843 81 aa4.24□□□□□ -1.73
ATPAF1-203ENST00000460928 ATP6AP1Q15904 470 aa4.24□□□□□ -1.73
ATPAF1-203ENST00000460928 CT45A2Q5DJT8 189 aa4.24□□□□□ -1.73
ATPAF1-203ENST00000460928 SPANXN2Q5MJ10 180 aa4.24□□□□□ -1.73
ATPAF1-203ENST00000460928 ACER2Q5QJU3 275 aa4.24□□□□□ -1.73
ATPAF1-203ENST00000460928 PIK3CD-AS1Q5SR53 167 aa4.24□□□□□ -1.73
ATPAF1-203ENST00000460928 PRAMEF20Q5VT98 475 aa4.24□□□□□ -1.73
ATPAF1-203ENST00000460928 HEPHL1Q6MZM0 1159 aa4.24□□□□□ -1.73
ATPAF1-203ENST00000460928 ISLR2Q6UXK2 745 aa4.24□□□□□ -1.73
ATPAF1-203ENST00000460928 DLEU7Q6UYE1 221 aa4.24□□□□□ -1.73
ATPAF1-203ENST00000460928 HSDL2Q6YN16 418 aa4.24□□□□□ -1.73
ATPAF1-203ENST00000460928 TRILQ7L0X0 811 aa4.24□□□□□ -1.73
ATPAF1-203ENST00000460928 SMIM15Q7Z3B0 74 aa4.24□□□□□ -1.73
ATPAF1-203ENST00000460928 SPATA19Q7Z5L4 167 aa4.24□□□□□ -1.73
ATPAF1-203ENST00000460928 AQP12AQ8IXF9 295 aa4.24□□□□□ -1.73
ATPAF1-203ENST00000460928 ZNF561Q8N587 486 aa4.24□□□□□ -1.73
ATPAF1-203ENST00000460928 ZNF441Q8N8Z8 693 aa4.24□□□□□ -1.73
ATPAF1-203ENST00000460928 MORN4Q8NDC4 146 aa4.24□□□□□ -1.73
ATPAF1-203ENST00000460928 OR10G3Q8NGC4 313 aa4.24□□□□□ -1.73
ATPAF1-203ENST00000460928 OR5D16Q8NGK9 328 aa4.24□□□□□ -1.73
ATPAF1-203ENST00000460928 OR4A15Q8NGL6 344 aa4.24□□□□□ -1.73
ATPAF1-203ENST00000460928 M1APQ8TC57 530 aa4.24□□□□□ -1.73
ATPAF1-203ENST00000460928 GLYATL2Q8WU03 294 aa4.24□□□□□ -1.73
ATPAF1-203ENST00000460928 IGFBPL1Q8WX77 278 aa4.24□□□□□ -1.73
ATPAF1-203ENST00000460928 ROBO4Q8WZ75 1007 aa4.24□□□□□ -1.73
ATPAF1-203ENST00000460928 FCGR1BQ92637 280 aa4.24□□□□□ -1.73
ATPAF1-203ENST00000460928 ADIPOR1Q96A54 375 aa4.24□□□□□ -1.73
ATPAF1-203ENST00000460928 CCDC124Q96CT7 223 aaKnown RBP4.24□□□□□ -1.73
ATPAF1-203ENST00000460928 COQ8BQ96D53 544 aa4.24□□□□□ -1.73
ATPAF1-203ENST00000460928 FER1L6-AS2Q96M78 137 aa4.24□□□□□ -1.73
ATPAF1-203ENST00000460928 Q96MT0 163 aa4.24□□□□□ -1.73
ATPAF1-203ENST00000460928 OR52E6Q96RD3 313 aa4.24□□□□□ -1.73
ATPAF1-203ENST00000460928 NODALQ96S42 347 aa4.24□□□□□ -1.73
ATPAF1-203ENST00000460928 RASL10BQ96S79 203 aa4.24□□□□□ -1.73
ATPAF1-203ENST00000460928 ZBTB18Q99592 522 aa4.24□□□□□ -1.73
ATPAF1-203ENST00000460928 TXN2Q99757 166 aa4.24□□□□□ -1.73
ATPAF1-203ENST00000460928 PCGF1Q9BSM1 259 aa4.24□□□□□ -1.73
ATPAF1-203ENST00000460928 REG4Q9BYZ8 158 aa4.24□□□□□ -1.73
ATPAF1-203ENST00000460928 RTN4RQ9BZR6 473 aa4.24□□□□□ -1.73
ATPAF1-203ENST00000460928 ZNF436Q9C0F3 470 aaPredicted RBP4.24□□□□□ -1.73
ATPAF1-203ENST00000460928 WWTR1Q9GZV5 400 aa4.24□□□□□ -1.73
ATPAF1-203ENST00000460928 IKZF5Q9H5V7 419 aa4.24□□□□□ -1.73
ATPAF1-203ENST00000460928 FOLH1BQ9HBA9 442 aa4.24□□□□□ -1.73
ATPAF1-203ENST00000460928 C3orf14Q9HBI5 128 aa4.24□□□□□ -1.73
ATPAF1-203ENST00000460928 MMP25Q9NPA2 562 aa4.24□□□□□ -1.73
ATPAF1-203ENST00000460928 CCNB1IP1Q9NPC3 277 aa4.24□□□□□ -1.73
ATPAF1-203ENST00000460928 SLC52A3Q9NQ40 469 aa4.24□□□□□ -1.73
ATPAF1-203ENST00000460928 SDR39U1Q9NRG7 319 aaPredicted RBP4.24□□□□□ -1.73
ATPAF1-203ENST00000460928 CYSLTR2Q9NS75 346 aa4.24□□□□□ -1.73
ATPAF1-203ENST00000460928 DEPPQ9NTK1 212 aa4.24□□□□□ -1.73
ATPAF1-203ENST00000460928 FAM120CQ9NX05 1096 aaKnown RBP4.24□□□□□ -1.73
ATPAF1-203ENST00000460928 SMPD3Q9NY59 655 aaPredicted RBP4.24□□□□□ -1.73
ATPAF1-203ENST00000460928 ELOVL5Q9NYP7 299 aa4.24□□□□□ -1.73
ATPAF1-203ENST00000460928 RDH8Q9NYR8 311 aa4.24□□□□□ -1.73
ATPAF1-203ENST00000460928 TMEM181Q9P2C4 612 aa4.24□□□□□ -1.73
ATPAF1-203ENST00000460928 METTL1Q9UBP6 276 aaKnown RBP4.24□□□□□ -1.73
ATPAF1-203ENST00000460928 STUB1Q9UNE7 303 aa4.24□□□□□ -1.73
ATPAF1-203ENST00000460928 SLC6A5Q9Y345 797 aa4.24□□□□□ -1.73
ATPAF1-203ENST00000460928 HSPB11Q9Y547 144 aa4.24□□□□□ -1.73
ATPAF1-203ENST00000460928 ALG5Q9Y673 324 aa4.24□□□□□ -1.73
ATPAF1-203ENST00000460928 POLEQ07864 2286 aa4.24□□□□□ -1.73
ATPAF1-203ENST00000460928 ANKHD1Q8IWZ3 2542 aaKnown RBP4.23□□□□□ -1.73
ATPAF1-203ENST00000460928 HEATR5AQ86XA9 2040 aa4.23□□□□□ -1.73
ATPAF1-203ENST00000460928 A0A075B6Q4 140 aa4.23□□□□□ -1.73
ATPAF1-203ENST00000460928 RNF103-CHMP3A0A140T963 221 aa4.23□□□□□ -1.73
ATPAF1-203ENST00000460928 A0A1B0GVI7 797 aa4.23□□□□□ -1.73
ATPAF1-203ENST00000460928 KDM4EB2RXH2 506 aaPredicted RBP4.23□□□□□ -1.73
ATPAF1-203ENST00000460928 MKRN2OSH3BPM6 223 aa4.23□□□□□ -1.73
ATPAF1-203ENST00000460928 ADAM10O14672 748 aa4.23□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms