RNA–Protein interactions for RNA: ENST00000460822.1

HPS3-203, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 2

Gene HPS3, Length 1,958 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-203ENST00000460822 PLPP1O14494 284 aa2.23□□□□□ -2.05
HPS3-203ENST00000460822 XRCC2O43543 280 aa2.23□□□□□ -2.05
HPS3-203ENST00000460822 CYTH3O43739 400 aa2.23□□□□□ -2.05
HPS3-203ENST00000460822 ZNF354AO60765 605 aaPredicted RBP2.23□□□□□ -2.05
HPS3-203ENST00000460822 EDF1O60869 148 aaKnown RBP2.23□□□□□ -2.05
HPS3-203ENST00000460822 NDUFS6O75380 124 aaKnown RBP2.23□□□□□ -2.05
HPS3-203ENST00000460822 CBR3O75828 277 aa2.23□□□□□ -2.05
HPS3-203ENST00000460822 VAPBO95292 243 aa2.23□□□□□ -2.05
HPS3-203ENST00000460822 PSMG1O95456 288 aa2.23□□□□□ -2.05
HPS3-203ENST00000460822 HBE1P02100 147 aa2.23□□□□□ -2.05
HPS3-203ENST00000460822 ZNF3P17036 446 aa2.23□□□□□ -2.05
HPS3-203ENST00000460822 TCN1P20061 433 aaPredicted RBP2.23□□□□□ -2.05
HPS3-203ENST00000460822 MARCKSL1P49006 195 aa2.23□□□□□ -2.05
HPS3-203ENST00000460822 UCNP55089 124 aa2.23□□□□□ -2.05
HPS3-203ENST00000460822 ACVR1Q04771 509 aa2.23□□□□□ -2.05
HPS3-203ENST00000460822 PDIA2Q13087 525 aaKnown RBP2.23□□□□□ -2.05
HPS3-203ENST00000460822 ORC2Q13416 577 aaPredicted RBP2.23□□□□□ -2.05
HPS3-203ENST00000460822 GGTLC2Q14390 218 aa2.23□□□□□ -2.05
HPS3-203ENST00000460822 PRMT9Q6P2P2 845 aa2.23□□□□□ -2.05
HPS3-203ENST00000460822 WDR74Q6RFH5 385 aaPredicted RBP2.23□□□□□ -2.05
HPS3-203ENST00000460822 LINC00336Q6ZUF6 198 aa2.23□□□□□ -2.05
HPS3-203ENST00000460822 KIR2DL5AQ8N109 375 aa2.23□□□□□ -2.05
HPS3-203ENST00000460822 C6orf223Q8N319 242 aa2.23□□□□□ -2.05
HPS3-203ENST00000460822 KIR2DL5BQ8NHK3 375 aa2.23□□□□□ -2.05
HPS3-203ENST00000460822 DDI1Q8WTU0 396 aa2.23□□□□□ -2.05
HPS3-203ENST00000460822 TFGQ92734 400 aaPredicted RBP2.23□□□□□ -2.05
HPS3-203ENST00000460822 MED8Q96G25 268 aa2.23□□□□□ -2.05
HPS3-203ENST00000460822 RNF170Q96K19 258 aa2.23□□□□□ -2.05
HPS3-203ENST00000460822 OLFM3Q96PB7 478 aa2.23□□□□□ -2.05
HPS3-203ENST00000460822 C19orf24Q9BVV8 132 aa2.23□□□□□ -2.05
HPS3-203ENST00000460822 HES7Q9BYE0 225 aa2.23□□□□□ -2.05
HPS3-203ENST00000460822 KRTAP4-3Q9BYR4 195 aa2.23□□□□□ -2.05
HPS3-203ENST00000460822 SELENOIQ9C0D9 397 aa2.23□□□□□ -2.05
HPS3-203ENST00000460822 C20orf85Q9H1P6 137 aa2.23□□□□□ -2.05
HPS3-203ENST00000460822 SIAEQ9HAT2 523 aa2.23□□□□□ -2.05
HPS3-203ENST00000460822 PATZ1Q9HBE1 687 aaKnown RBP2.23□□□□□ -2.05
HPS3-203ENST00000460822 EML4Q9HC35 981 aaKnown RBP2.23□□□□□ -2.05
HPS3-203ENST00000460822 ANKHQ9HCJ1 492 aa2.23□□□□□ -2.05
HPS3-203ENST00000460822 SLCO1B3Q9NPD5 702 aa2.23□□□□□ -2.05
HPS3-203ENST00000460822 SAR1AQ9NR31 198 aa2.23□□□□□ -2.05
HPS3-203ENST00000460822 EURLQ9NYK6 297 aa2.23□□□□□ -2.05
HPS3-203ENST00000460822 NKIRAS1Q9NYS0 192 aa2.23□□□□□ -2.05
HPS3-203ENST00000460822 DCDC2Q9UHG0 476 aa2.23□□□□□ -2.05
HPS3-203ENST00000460822 ROBO3Q96MS0 1386 aa2.23□□□□□ -2.05
HPS3-203ENST00000460822 FRMPD3Q5JV73 1810 aa2.22□□□□□ -2.05
HPS3-203ENST00000460822 TANC1Q9C0D5 1861 aa2.22□□□□□ -2.05
HPS3-203ENST00000460822 RGPD3A6NKT7 1758 aaPredicted RBP2.22□□□□□ -2.05
HPS3-203ENST00000460822 RGPD4Q7Z3J3 1758 aa2.22□□□□□ -2.05
HPS3-203ENST00000460822 ROBO1Q9Y6N7 1651 aa2.22□□□□□ -2.05
HPS3-203ENST00000460822 A0A1W2PRF3 423 aa2.22□□□□□ -2.05
HPS3-203ENST00000460822 A0A1W2PRM7 423 aa2.22□□□□□ -2.05
HPS3-203ENST00000460822 TSPAN11A1L157 253 aa2.22□□□□□ -2.05
HPS3-203ENST00000460822 TRPC5OSA6NMA1 111 aa2.22□□□□□ -2.05
HPS3-203ENST00000460822 KRTAP16-1A8MUX0 517 aa2.22□□□□□ -2.05
HPS3-203ENST00000460822 MIF4GDA9UHW6 222 aaKnown RBP2.22□□□□□ -2.05
HPS3-203ENST00000460822 SLC37A4O43826 429 aa2.22□□□□□ -2.05
HPS3-203ENST00000460822 CCDC22O60826 627 aa2.22□□□□□ -2.05
HPS3-203ENST00000460822 LYPLA1O75608 230 aaPredicted RBP2.22□□□□□ -2.05
HPS3-203ENST00000460822 CDK14O94921 469 aa2.22□□□□□ -2.05
HPS3-203ENST00000460822 TTC4O95801 387 aa2.22□□□□□ -2.05
HPS3-203ENST00000460822 ZNF883P0CG24 379 aa2.22□□□□□ -2.05
HPS3-203ENST00000460822 IL32P24001 234 aa2.22□□□□□ -2.05
HPS3-203ENST00000460822 CRABP2P29373 138 aa2.22□□□□□ -2.05
HPS3-203ENST00000460822 COILP38432 576 aaPredicted RBP2.22□□□□□ -2.05
HPS3-203ENST00000460822 RFC3P40938 356 aa2.22□□□□□ -2.05
HPS3-203ENST00000460822 OR3A4PP47883 348 aa2.22□□□□□ -2.05
HPS3-203ENST00000460822 CSNK1A1P48729 337 aa2.22□□□□□ -2.05
HPS3-203ENST00000460822 DYNLL1P63167 89 aaKnown RBP2.22□□□□□ -2.05
HPS3-203ENST00000460822 HPCAP84074 193 aa2.22□□□□□ -2.05
HPS3-203ENST00000460822 SP4Q02446 784 aa2.22□□□□□ -2.05
HPS3-203ENST00000460822 ECH1Q13011 328 aa2.22□□□□□ -2.05
HPS3-203ENST00000460822 STX3Q13277 289 aa2.22□□□□□ -2.05
HPS3-203ENST00000460822 TMED2Q15363 201 aa2.22□□□□□ -2.05
HPS3-203ENST00000460822 PSMD5Q16401 504 aa2.22□□□□□ -2.05
HPS3-203ENST00000460822 GSG1Q2KHT4 349 aa2.22□□□□□ -2.05
HPS3-203ENST00000460822 PTPN20Q4JDL3 420 aa2.22□□□□□ -2.05
HPS3-203ENST00000460822 TPRG1LQ5T0D9 272 aa2.22□□□□□ -2.05
HPS3-203ENST00000460822 C11orf71Q6IPW1 123 aa2.22□□□□□ -2.05
HPS3-203ENST00000460822 ADNP2Q6IQ32 1131 aa2.22□□□□□ -2.05
HPS3-203ENST00000460822 ZNF621Q6ZSS3 439 aa2.22□□□□□ -2.05
HPS3-203ENST00000460822 MOB1BQ7L9L4 216 aa2.22□□□□□ -2.05
HPS3-203ENST00000460822 OR2W3Q7Z3T1 314 aa2.22□□□□□ -2.05
HPS3-203ENST00000460822 ZNF677Q86XU0 584 aa2.22□□□□□ -2.05
HPS3-203ENST00000460822 SYS1Q8N2H4 156 aa2.22□□□□□ -2.05
HPS3-203ENST00000460822 RIBC1Q8N443 379 aaPredicted RBP2.22□□□□□ -2.05
HPS3-203ENST00000460822 UBL4BQ8N7F7 174 aa2.22□□□□□ -2.05
HPS3-203ENST00000460822 HSD17B11Q8NBQ5 300 aa2.22□□□□□ -2.05
HPS3-203ENST00000460822 KLHL30-AS1Q8NEE0 82 aa2.22□□□□□ -2.05
HPS3-203ENST00000460822 NAT14Q8WUY8 206 aa2.22□□□□□ -2.05
HPS3-203ENST00000460822 BAALCQ8WXS3 180 aa2.22□□□□□ -2.05
HPS3-203ENST00000460822 LZICQ8WZA0 190 aa2.22□□□□□ -2.05
HPS3-203ENST00000460822 CCDC124Q96CT7 223 aaKnown RBP2.22□□□□□ -2.05
HPS3-203ENST00000460822 SIGLEC12Q96PQ1 595 aa2.22□□□□□ -2.05
HPS3-203ENST00000460822 HIST1H4GQ99525 98 aa2.22□□□□□ -2.05
HPS3-203ENST00000460822 KIR2DL4Q99706 377 aa2.22□□□□□ -2.05
HPS3-203ENST00000460822 SPZ1Q9BXG8 430 aa2.22□□□□□ -2.05
HPS3-203ENST00000460822 TMEM38AQ9H6F2 299 aa2.22□□□□□ -2.05
HPS3-203ENST00000460822 CLN6Q9NWW5 311 aa2.22□□□□□ -2.05
HPS3-203ENST00000460822 RHBDL2Q9NX52 303 aa2.22□□□□□ -2.05
HPS3-203ENST00000460822 QPCTLQ9NXS2 382 aa2.22□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms