RNA–Protein interactions for RNA: ENST00000460731.5

PTPN12-209, Transcript of protein tyrosine phosphatase, non-receptor type 12, human

TSL 2

Gene PTPN12, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTPN12-209	ENST00000460731	EMC7	Q9NPA0	242 aa		4.86	□□□□□ -1.63
PTPN12-209	ENST00000460731	NGB	Q9NPG2	151 aa		4.86	□□□□□ -1.63
PTPN12-209	ENST00000460731	TUBG2	Q9NRH3	451 aa		4.86	□□□□□ -1.63
PTPN12-209	ENST00000460731	INPP5E	Q9NRR6	644 aa		4.86	□□□□□ -1.63
PTPN12-209	ENST00000460731	TBCCD1	Q9NVR7	557 aa		4.86	□□□□□ -1.63
PTPN12-209	ENST00000460731	DNAJC27	Q9NZQ0	273 aa		4.86	□□□□□ -1.63
PTPN12-209	ENST00000460731	DIMT1	Q9UNQ2	313 aa	Known RBP	4.86	□□□□□ -1.63
PTPN12-209	ENST00000460731	KLHDC2	Q9Y2U9	406 aa		4.86	□□□□□ -1.63
PTPN12-209	ENST00000460731	PCDHGB5	Q9Y5G0	923 aa		4.86	□□□□□ -1.63
PTPN12-209	ENST00000460731	TMEM14A	Q9Y6G1	99 aa		4.86	□□□□□ -1.63
PTPN12-209	ENST00000460731	CACNA1D	Q01668	2161 aa		4.86	□□□□□ -1.63
PTPN12-209	ENST00000460731	CCDC168	Q8NDH2	2452 aa		4.86	□□□□□ -1.63
PTPN12-209	ENST00000460731	USF3	Q68DE3	2245 aa		4.85	□□□□□ -1.63
PTPN12-209	ENST00000460731	IGHV2OR16-5	A0A0B4J2B6	119 aa		4.85	□□□□□ -1.63
PTPN12-209	ENST00000460731		A0A1B0GWJ7	208 aa		4.85	□□□□□ -1.63
PTPN12-209	ENST00000460731		A0A1W2PPL8	197 aa		4.85	□□□□□ -1.63
PTPN12-209	ENST00000460731		A0A1W2PQL4	384 aa	Predicted RBP	4.85	□□□□□ -1.63
PTPN12-209	ENST00000460731	IRGM	A1A4Y4	181 aa		4.85	□□□□□ -1.63
PTPN12-209	ENST00000460731	TVP23A	A6NH52	213 aa		4.85	□□□□□ -1.63
PTPN12-209	ENST00000460731	TRIM64C	A6NLI5	447 aa		4.85	□□□□□ -1.63
PTPN12-209	ENST00000460731	KRTAP29-1	A8MX34	341 aa	Predicted RBP	4.85	□□□□□ -1.63
PTPN12-209	ENST00000460731	SHISA9	B4DS77	424 aa		4.85	□□□□□ -1.63
PTPN12-209	ENST00000460731	SLC1A7	O00341	560 aa		4.85	□□□□□ -1.63
PTPN12-209	ENST00000460731	PHYH	O14832	338 aa		4.85	□□□□□ -1.63
PTPN12-209	ENST00000460731	SELENOF	O60613	162 aa		4.85	□□□□□ -1.63
PTPN12-209	ENST00000460731	CTAG2	O75638	210 aa		4.85	□□□□□ -1.63
PTPN12-209	ENST00000460731	SEC14L2	O76054	403 aa		4.85	□□□□□ -1.63
PTPN12-209	ENST00000460731	FADS2	O95864	444 aa	Known RBP	4.85	□□□□□ -1.63
PTPN12-209	ENST00000460731	ACSM4	P0C7M7	580 aa		4.85	□□□□□ -1.63
PTPN12-209	ENST00000460731	CECR9	P0C854	216 aa		4.85	□□□□□ -1.63
PTPN12-209	ENST00000460731	LIMS3	P0CW19	117 aa		4.85	□□□□□ -1.63
PTPN12-209	ENST00000460731	LIMS4	P0CW20	117 aa		4.85	□□□□□ -1.63
PTPN12-209	ENST00000460731	ZNF823	P16415	610 aa		4.85	□□□□□ -1.63
PTPN12-209	ENST00000460731	NR4A1	P22736	598 aa		4.85	□□□□□ -1.63
PTPN12-209	ENST00000460731	STOM	P27105	288 aa		4.85	□□□□□ -1.63
PTPN12-209	ENST00000460731	NR1H2	P55055	460 aa		4.85	□□□□□ -1.63
PTPN12-209	ENST00000460731	ADAM8	P78325	824 aa		4.85	□□□□□ -1.63
PTPN12-209	ENST00000460731	IL5RA	Q01344	420 aa		4.85	□□□□□ -1.63
PTPN12-209	ENST00000460731	NAAA	Q02083	359 aa		4.85	□□□□□ -1.63
PTPN12-209	ENST00000460731	ZNF85	Q03923	595 aa		4.85	□□□□□ -1.63
PTPN12-209	ENST00000460731	GALE	Q14376	348 aa		4.85	□□□□□ -1.63
PTPN12-209	ENST00000460731	CDON	Q4KMG0	1287 aa		4.85	□□□□□ -1.63
PTPN12-209	ENST00000460731	KLHL12	Q53G59	568 aa		4.85	□□□□□ -1.63
PTPN12-209	ENST00000460731	BEX5	Q5H9J7	111 aa		4.85	□□□□□ -1.63
PTPN12-209	ENST00000460731	RBM48	Q5RL73	367 aa	Known RBP	4.85	□□□□□ -1.63
PTPN12-209	ENST00000460731	ZNF774	Q6NX45	483 aa		4.85	□□□□□ -1.63
PTPN12-209	ENST00000460731	TMEM53	Q6P2H8	277 aa		4.85	□□□□□ -1.63
PTPN12-209	ENST00000460731	CORO6	Q6QEF8	472 aa		4.85	□□□□□ -1.63
PTPN12-209	ENST00000460731	TMEM108	Q6UXF1	575 aa		4.85	□□□□□ -1.63
PTPN12-209	ENST00000460731	DCXR	Q7Z4W1	244 aa		4.85	□□□□□ -1.63
PTPN12-209	ENST00000460731	MYPOP	Q86VE0	399 aa	Predicted RBP	4.85	□□□□□ -1.63
PTPN12-209	ENST00000460731	GLCCI1	Q86VQ1	547 aa		4.85	□□□□□ -1.63
PTPN12-209	ENST00000460731	ERI1	Q8IV48	349 aa	Known RBP	4.85	□□□□□ -1.63
PTPN12-209	ENST00000460731	ZNF679	Q8IYX0	411 aa		4.85	□□□□□ -1.63
PTPN12-209	ENST00000460731	SYS1	Q8N2H4	156 aa		4.85	□□□□□ -1.63
PTPN12-209	ENST00000460731	LRRC18	Q8N456	261 aa		4.85	□□□□□ -1.63
PTPN12-209	ENST00000460731	ACBD7	Q8N6N7	88 aa		4.85	□□□□□ -1.63
PTPN12-209	ENST00000460731	NUP37	Q8NFH4	326 aa		4.85	□□□□□ -1.63
PTPN12-209	ENST00000460731	OR4F15	Q8NGB8	312 aa		4.85	□□□□□ -1.63
PTPN12-209	ENST00000460731	OR52I1	Q8NGK6	324 aa		4.85	□□□□□ -1.63
PTPN12-209	ENST00000460731	OR6K6	Q8NGW6	343 aa		4.85	□□□□□ -1.63
PTPN12-209	ENST00000460731	OR52N5	Q8NH56	324 aa		4.85	□□□□□ -1.63
PTPN12-209	ENST00000460731	OR1F12	Q8NHA8	337 aa		4.85	□□□□□ -1.63
PTPN12-209	ENST00000460731	LILRB1	Q8NHL6	650 aa	Predicted RBP	4.85	□□□□□ -1.63
PTPN12-209	ENST00000460731	RPS4Y2	Q8TD47	263 aa		4.85	□□□□□ -1.63
PTPN12-209	ENST00000460731	HTRA1	Q92743	480 aa		4.85	□□□□□ -1.63
PTPN12-209	ENST00000460731	RNFT2	Q96EX2	444 aa		4.85	□□□□□ -1.63
PTPN12-209	ENST00000460731	OR8B4	Q96RC9	309 aa		4.85	□□□□□ -1.63
PTPN12-209	ENST00000460731	KCNJ15	Q99712	375 aa		4.85	□□□□□ -1.63
PTPN12-209	ENST00000460731	MED18	Q9BUE0	208 aa		4.85	□□□□□ -1.63
PTPN12-209	ENST00000460731	C1QTNF5	Q9BXJ0	243 aa		4.85	□□□□□ -1.63
PTPN12-209	ENST00000460731	KCNN2	Q9H2S1	579 aa		4.85	□□□□□ -1.63
PTPN12-209	ENST00000460731		Q9H521	79 aa		4.85	□□□□□ -1.63
PTPN12-209	ENST00000460731	NIPAL2	Q9H841	368 aa		4.85	□□□□□ -1.63
PTPN12-209	ENST00000460731	PAK1IP1	Q9NWT1	392 aa	Predicted RBP	4.85	□□□□□ -1.63
PTPN12-209	ENST00000460731	COPS3	Q9UNS2	423 aa		4.85	□□□□□ -1.63
PTPN12-209	ENST00000460731	SETX	Q7Z333	2677 aa	Known RBP	4.85	□□□□□ -1.63
PTPN12-209	ENST00000460731	PDZD2	O15018	2839 aa		4.84	□□□□□ -1.63
PTPN12-209	ENST00000460731	RAI1	Q7Z5J4	1906 aa	Predicted RBP	4.84	□□□□□ -1.63
PTPN12-209	ENST00000460731	IQCM	A0A1B0GVH7	501 aa		4.84	□□□□□ -1.63
PTPN12-209	ENST00000460731	MBD3L2B	A0A1B0GVZ6	204 aa	Predicted RBP	4.84	□□□□□ -1.63
PTPN12-209	ENST00000460731		A0A1W2PPR1	153 aa		4.84	□□□□□ -1.63
PTPN12-209	ENST00000460731	TMEM129	A0AVI4	362 aa		4.84	□□□□□ -1.63
PTPN12-209	ENST00000460731		A6NNC1	897 aa		4.84	□□□□□ -1.63
PTPN12-209	ENST00000460731	ZNF878	C9JN71	531 aa		4.84	□□□□□ -1.63
PTPN12-209	ENST00000460731	PRSS44	E7EML9	344 aa		4.84	□□□□□ -1.63
PTPN12-209	ENST00000460731		H3BSA7	217 aa		4.84	□□□□□ -1.63
PTPN12-209	ENST00000460731	XPNPEP2	O43895	674 aa		4.84	□□□□□ -1.63
PTPN12-209	ENST00000460731	FAM20B	O75063	409 aa		4.84	□□□□□ -1.63
PTPN12-209	ENST00000460731	IGLV3-1	P01715	115 aa		4.84	□□□□□ -1.63
PTPN12-209	ENST00000460731	HLA-DQA2	P01906	255 aa		4.84	□□□□□ -1.63
PTPN12-209	ENST00000460731	APOC1	P02654	83 aa		4.84	□□□□□ -1.63
PTPN12-209	ENST00000460731	CDK1	P06493	297 aa		4.84	□□□□□ -1.63
PTPN12-209	ENST00000460731	LYN	P07948	512 aa		4.84	□□□□□ -1.63
PTPN12-209	ENST00000460731	HTR1A	P08908	422 aa		4.84	□□□□□ -1.63
PTPN12-209	ENST00000460731	CD79A	P11912	226 aa		4.84	□□□□□ -1.63
PTPN12-209	ENST00000460731	ZNF250	P15622	560 aa		4.84	□□□□□ -1.63
PTPN12-209	ENST00000460731	APEX1	P27695	318 aa	Known RBP	4.84	□□□□□ -1.63
PTPN12-209	ENST00000460731	CALCR	P30988	508 aa		4.84	□□□□□ -1.63
PTPN12-209	ENST00000460731	GLRX	P35754	106 aa		4.84	□□□□□ -1.63

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