RNA–Protein interactions for RNA: ENST00000460162.1

PTPN4-207, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 4

Gene PTPN4, Length 623 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-207ENST00000460162 MAGIXQ9H6Y5 334 aa19.04■□□□□ 0.64
PTPN4-207ENST00000460162 TBC1D23Q9NUY8 699 aa19.04■□□□□ 0.64
PTPN4-207ENST00000460162 PHYHO14832 338 aa19.03■□□□□ 0.64
PTPN4-207ENST00000460162 CCNB2O95067 398 aa19.03■□□□□ 0.64
PTPN4-207ENST00000460162 PRTN3P24158 256 aa19.03■□□□□ 0.64
PTPN4-207ENST00000460162 RPS27P42677 84 aaKnown RBP19.03■□□□□ 0.64
PTPN4-207ENST00000460162 SNAI3Q3KNW1 292 aa19.03■□□□□ 0.64
PTPN4-207ENST00000460162 DRAM2Q6UX65 266 aa19.03■□□□□ 0.64
PTPN4-207ENST00000460162 C9orf139Q6ZV77 190 aa19.03■□□□□ 0.64
PTPN4-207ENST00000460162 LNX2Q8N448 690 aa19.03■□□□□ 0.64
PTPN4-207ENST00000460162 SLC37A3Q8NCC5 494 aa19.03■□□□□ 0.64
PTPN4-207ENST00000460162 ADAT1Q9BUB4 502 aaKnown RBP19.03■□□□□ 0.64
PTPN4-207ENST00000460162 MS4A7Q9GZW8 240 aaPredicted RBP19.03■□□□□ 0.64
PTPN4-207ENST00000460162 MUC13Q9H3R2 512 aa19.03■□□□□ 0.64
PTPN4-207ENST00000460162 CLN8Q9UBY8 286 aa19.03■□□□□ 0.64
PTPN4-207ENST00000460162 BAIAP2Q9UQB8 552 aa19.03■□□□□ 0.64
PTPN4-207ENST00000460162 TVP23AA6NH52 213 aa19.02■□□□□ 0.64
PTPN4-207ENST00000460162 CD300LBA8K4G0 201 aa19.02■□□□□ 0.64
PTPN4-207ENST00000460162 FAM20BO75063 409 aa19.02■□□□□ 0.64
PTPN4-207ENST00000460162 PTBP3O95758 552 aaKnown RBP19.02■□□□□ 0.64
PTPN4-207ENST00000460162 HKR1P10072 659 aa19.02■□□□□ 0.64
PTPN4-207ENST00000460162 FOXL1Q12952 345 aa19.02■□□□□ 0.64
PTPN4-207ENST00000460162 OR8G1Q15617 311 aa19.02■□□□□ 0.64
PTPN4-207ENST00000460162 FAM201AQ5SY85 155 aa19.02■□□□□ 0.64
PTPN4-207ENST00000460162 ZNF362Q5T0B9 420 aaPredicted RBP19.02■□□□□ 0.64
PTPN4-207ENST00000460162 PRAMEF6Q5VXH4 476 aa19.02■□□□□ 0.64
PTPN4-207ENST00000460162 DCXRQ7Z4W1 244 aa19.02■□□□□ 0.64
PTPN4-207ENST00000460162 ARHGAP24Q8N264 748 aa19.02■□□□□ 0.64
PTPN4-207ENST00000460162 AQP11Q8NBQ7 271 aa19.02■□□□□ 0.64
PTPN4-207ENST00000460162 SGMS2Q8NHU3 365 aa19.02■□□□□ 0.64
PTPN4-207ENST00000460162 ZNF48Q96MX3 618 aaPredicted RBP19.02■□□□□ 0.64
PTPN4-207ENST00000460162 COPS4Q9BT78 406 aa19.02■□□□□ 0.64
PTPN4-207ENST00000460162 OPA3Q9H6K4 179 aa19.02■□□□□ 0.64
PTPN4-207ENST00000460162 TRAV40A0A0B4J280 105 aa19.01■□□□□ 0.63
PTPN4-207ENST00000460162 GMDSO60547 372 aa19.01■□□□□ 0.63
PTPN4-207ENST00000460162 PLATP00750 562 aa19.01■□□□□ 0.63
PTPN4-207ENST00000460162 GASTP01350 101 aa19.01■□□□□ 0.63
PTPN4-207ENST00000460162 IGHV4-38-2P0DP08 117 aa19.01■□□□□ 0.63
PTPN4-207ENST00000460162 PSKH1P11801 424 aa19.01■□□□□ 0.63
PTPN4-207ENST00000460162 CA6P23280 308 aa19.01■□□□□ 0.63
PTPN4-207ENST00000460162 ENTPD1P49961 510 aa19.01■□□□□ 0.63
PTPN4-207ENST00000460162 ZNF92Q03936 586 aa19.01■□□□□ 0.63
PTPN4-207ENST00000460162 PCK2Q16822 640 aa19.01■□□□□ 0.63
PTPN4-207ENST00000460162 LYPD4Q6UWN0 246 aa19.01■□□□□ 0.63
PTPN4-207ENST00000460162 BCL6BQ8N143 479 aaPredicted RBP19.01■□□□□ 0.63
PTPN4-207ENST00000460162 PLPP7Q8NBV4 271 aa19.01■□□□□ 0.63
PTPN4-207ENST00000460162 OR9Q1Q8NGQ5 310 aa19.01■□□□□ 0.63
PTPN4-207ENST00000460162 ZNRF4Q8WWF5 429 aa19.01■□□□□ 0.63
PTPN4-207ENST00000460162 C1orf147Q96MC9 270 aaPredicted RBP19.01■□□□□ 0.63
PTPN4-207ENST00000460162 FN3KRPQ9HA64 309 aa19.01■□□□□ 0.63
PTPN4-207ENST00000460162 MRPL15Q9P015 296 aaKnown RBP19.01■□□□□ 0.63
PTPN4-207ENST00000460162 KIR2DS1A0A191URI9 304 aa19■□□□□ 0.63
PTPN4-207ENST00000460162 TCRBV5S2A0A599 114 aa19■□□□□ 0.63
PTPN4-207ENST00000460162 CLDN34H7C241 214 aa19■□□□□ 0.63
PTPN4-207ENST00000460162 SPARCP09486 303 aa19■□□□□ 0.63
PTPN4-207ENST00000460162 FMO3P31513 532 aa19■□□□□ 0.63
PTPN4-207ENST00000460162 MTNR1AP48039 350 aa19■□□□□ 0.63
PTPN4-207ENST00000460162 SLC25A1P53007 311 aa19■□□□□ 0.63
PTPN4-207ENST00000460162 BAMBIQ13145 260 aa19■□□□□ 0.63
PTPN4-207ENST00000460162 CRMP1Q14194 572 aa19■□□□□ 0.63
PTPN4-207ENST00000460162 MPPED2Q15777 294 aa19■□□□□ 0.63
PTPN4-207ENST00000460162 KCNJ8Q15842 424 aa19■□□□□ 0.63
PTPN4-207ENST00000460162 GLYATL3Q5SZD4 288 aa19■□□□□ 0.63
PTPN4-207ENST00000460162 WDR25Q64LD2 544 aaPredicted RBP19■□□□□ 0.63
PTPN4-207ENST00000460162 LCN8Q6JVE9 175 aa19■□□□□ 0.63
PTPN4-207ENST00000460162 OR2T33Q8NG76 320 aa19■□□□□ 0.63
PTPN4-207ENST00000460162 OR51L1Q8NGJ5 315 aa19■□□□□ 0.63
PTPN4-207ENST00000460162 OR2AE1Q8NHA4 323 aa19■□□□□ 0.63
PTPN4-207ENST00000460162 NUDT16L1Q9BRJ7 211 aaKnown RBP19■□□□□ 0.63
PTPN4-207ENST00000460162 TSSK6Q9BXA6 273 aa19■□□□□ 0.63
PTPN4-207ENST00000460162 NMNAT2Q9BZQ4 307 aa19■□□□□ 0.63
PTPN4-207ENST00000460162 UFSP2Q9NUQ7 469 aa19■□□□□ 0.63
PTPN4-207ENST00000460162 GGT3PA6NGU5 568 aa18.99■□□□□ 0.63
PTPN4-207ENST00000460162 ZNF878C9JN71 531 aa18.99■□□□□ 0.63
PTPN4-207ENST00000460162 RNASE1P07998 156 aaKnown RBP18.99■□□□□ 0.63
PTPN4-207ENST00000460162 ANOS1P23352 680 aa18.99■□□□□ 0.63
PTPN4-207ENST00000460162 PSMB10P40306 273 aa18.99■□□□□ 0.63
PTPN4-207ENST00000460162 NPY4RP50391 375 aa18.99■□□□□ 0.63
PTPN4-207ENST00000460162 BLVRAP53004 296 aa18.99■□□□□ 0.63
PTPN4-207ENST00000460162 GYS2P54840 703 aa18.99■□□□□ 0.63
PTPN4-207ENST00000460162 TEX30Q5JUR7 227 aa18.99■□□□□ 0.63
PTPN4-207ENST00000460162 FITM2Q8N6M3 262 aa18.99■□□□□ 0.63
PTPN4-207ENST00000460162 OR4Q3Q8NH05 313 aa18.99■□□□□ 0.63
PTPN4-207ENST00000460162 SLAMF6Q96DU3 332 aa18.99■□□□□ 0.63
PTPN4-207ENST00000460162 DUX5Q96PT3 197 aa18.99■□□□□ 0.63
PTPN4-207ENST00000460162 KCNJ15Q99712 375 aa18.99■□□□□ 0.63
PTPN4-207ENST00000460162 DGCR6LQ9BY27 220 aa18.99■□□□□ 0.63
PTPN4-207ENST00000460162 REEP1Q9H902 201 aa18.99■□□□□ 0.63
PTPN4-207ENST00000460162 RNF7Q9UBF6 113 aa18.99■□□□□ 0.63
PTPN4-207ENST00000460162 SAMHD1Q9Y3Z3 626 aaKnown RBP18.99■□□□□ 0.63
PTPN4-207ENST00000460162 SPRY1O43609 319 aaPredicted RBP18.98■□□□□ 0.63
PTPN4-207ENST00000460162 ENSAO43768 121 aaKnown RBP18.98■□□□□ 0.63
PTPN4-207ENST00000460162 SOX14O95416 240 aa18.98■□□□□ 0.63
PTPN4-207ENST00000460162 IFNGP01579 166 aa18.98■□□□□ 0.63
PTPN4-207ENST00000460162 SPI1P17947 270 aa18.98■□□□□ 0.63
PTPN4-207ENST00000460162 OR2T5Q6IEZ7 315 aa18.98■□□□□ 0.63
PTPN4-207ENST00000460162 LYPD2Q6UXB3 125 aa18.98■□□□□ 0.63
PTPN4-207ENST00000460162 ZNF841Q6ZN19 808 aa18.98■□□□□ 0.63
PTPN4-207ENST00000460162 SPERTQ8NA61 448 aa18.98■□□□□ 0.63
PTPN4-207ENST00000460162 OR2T29Q8NH02 315 aa18.98■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms