RNA–Protein interactions for RNA: ENST00000460120.5

HPS3-202, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 2 BASIC

Gene HPS3, Length 2,745 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-202ENST00000460120 FAM219AQ8IW50 185 aa16.07■□□□□ 0.16
HPS3-202ENST00000460120 SLC22A24Q8N4F4 322 aa16.07■□□□□ 0.16
HPS3-202ENST00000460120 RBPMSQ93062 196 aaKnown RBP16.07■□□□□ 0.16
HPS3-202ENST00000460120 TTLL8A6PVC2 850 aa16.06■□□□□ 0.16
HPS3-202ENST00000460120 E9PLN8 166 aa16.06■□□□□ 0.16
HPS3-202ENST00000460120 F5H5K5 113 aa16.06■□□□□ 0.16
HPS3-202ENST00000460120 SLC6A9P48067 706 aa16.06■□□□□ 0.16
HPS3-202ENST00000460120 CX3CR1P49238 355 aa16.06■□□□□ 0.16
HPS3-202ENST00000460120 ESX1Q8N693 406 aa16.06■□□□□ 0.16
HPS3-202ENST00000460120 ADAD2Q8NCV1 583 aaKnown RBP16.06■□□□□ 0.16
HPS3-202ENST00000460120 MR1Q95460 341 aa16.06■□□□□ 0.16
HPS3-202ENST00000460120 CST11Q9H112 138 aa16.06■□□□□ 0.16
HPS3-202ENST00000460120 GAREM1Q9H706 876 aa16.06■□□□□ 0.16
HPS3-202ENST00000460120 PRR13Q9NZ81 148 aa16.06■□□□□ 0.16
HPS3-202ENST00000460120 TRAV14DV4A0A0A6YYC5 116 aa16.06■□□□□ 0.16
HPS3-202ENST00000460120 A0A1B0GTI1 187 aa16.06■□□□□ 0.16
HPS3-202ENST00000460120 ZNF878C9JN71 531 aa16.06■□□□□ 0.16
HPS3-202ENST00000460120 PMS2P2O95744 297 aa16.06■□□□□ 0.16
HPS3-202ENST00000460120 CCL4P13236 92 aa16.06■□□□□ 0.16
HPS3-202ENST00000460120 P2RY4P51582 365 aa16.06■□□□□ 0.16
HPS3-202ENST00000460120 GMFBP60983 142 aa16.06■□□□□ 0.16
HPS3-202ENST00000460120 PPP1R1AQ13522 171 aa16.06■□□□□ 0.16
HPS3-202ENST00000460120 RAET1LQ5VY80 246 aa16.06■□□□□ 0.16
HPS3-202ENST00000460120 ZNF385CQ66K41 422 aaPredicted RBP16.06■□□□□ 0.16
HPS3-202ENST00000460120 SAP25Q8TEE9 199 aa16.06■□□□□ 0.16
HPS3-202ENST00000460120 MAFIPQ8WZ33 124 aa16.06■□□□□ 0.16
HPS3-202ENST00000460120 SCPEP1Q9HB40 452 aa16.06■□□□□ 0.16
HPS3-202ENST00000460120 KCNK7Q9Y2U2 307 aa16.06■□□□□ 0.16
HPS3-202ENST00000460120 AUP1Q9Y679 476 aa16.06■□□□□ 0.16
HPS3-202ENST00000460120 DISC1C4P0D8 188 aa16.05■□□□□ 0.16
HPS3-202ENST00000460120 CDK2AP1O14519 115 aa16.05■□□□□ 0.16
HPS3-202ENST00000460120 SOCS1O15524 211 aa16.05■□□□□ 0.16
HPS3-202ENST00000460120 TMEM65Q6PI78 240 aa16.05■□□□□ 0.16
HPS3-202ENST00000460120 DEGS2Q6QHC5 323 aa16.05■□□□□ 0.16
HPS3-202ENST00000460120 ZNF546Q86UE3 836 aa16.05■□□□□ 0.16
HPS3-202ENST00000460120 OR10K1Q8NGX5 313 aa16.05■□□□□ 0.16
HPS3-202ENST00000460120 AQP3Q92482 292 aa16.05■□□□□ 0.16
HPS3-202ENST00000460120 ZBTB8AQ96BR9 441 aa16.05■□□□□ 0.16
HPS3-202ENST00000460120 LINC00052Q96N35 136 aa16.05■□□□□ 0.16
HPS3-202ENST00000460120 SDHAF2Q9NX18 166 aa16.05■□□□□ 0.16
HPS3-202ENST00000460120 MRPS28Q9Y2Q9 187 aaKnown RBP16.05■□□□□ 0.16
HPS3-202ENST00000460120 PTRH2Q9Y3E5 179 aaKnown RBP16.05■□□□□ 0.16
HPS3-202ENST00000460120 LOC390937A0A1W2PQ73 354 aa16.05■□□□□ 0.16
HPS3-202ENST00000460120 SULT1C2O00338 296 aa16.05■□□□□ 0.16
HPS3-202ENST00000460120 PDGFBP01127 241 aaPredicted RBP16.05■□□□□ 0.16
HPS3-202ENST00000460120 RLN2P04090 185 aa16.05■□□□□ 0.16
HPS3-202ENST00000460120 PI3P19957 117 aa16.05■□□□□ 0.16
HPS3-202ENST00000460120 CCDC157Q569K6 752 aa16.05■□□□□ 0.16
HPS3-202ENST00000460120 LYPD6Q86Y78 171 aa16.05■□□□□ 0.16
HPS3-202ENST00000460120 MAFAQ8NHW3 353 aaPredicted RBP16.05■□□□□ 0.16
HPS3-202ENST00000460120 IFI44Q8TCB0 444 aa16.05■□□□□ 0.16
HPS3-202ENST00000460120 UCN2Q96RP3 112 aa16.05■□□□□ 0.16
HPS3-202ENST00000460120 A0A1W2PNV4 684 aa16.04■□□□□ 0.16
HPS3-202ENST00000460120 hCG_1807616A0A1W2PRN6 198 aa16.04■□□□□ 0.16
HPS3-202ENST00000460120 OR2AT4A6NND4 320 aa16.04■□□□□ 0.16
HPS3-202ENST00000460120 CRTAPO75718 401 aaPredicted RBP16.04■□□□□ 0.16
HPS3-202ENST00000460120 NMBP08949 121 aa16.04■□□□□ 0.16
HPS3-202ENST00000460120 GK2Q14410 553 aaPredicted RBP16.04■□□□□ 0.16
HPS3-202ENST00000460120 BOLLQ8N9W6 283 aaKnown RBP16.04■□□□□ 0.16
HPS3-202ENST00000460120 OR6S1Q8NH40 331 aa16.04■□□□□ 0.16
HPS3-202ENST00000460120 MRGPRFQ96AM1 343 aa16.04■□□□□ 0.16
HPS3-202ENST00000460120 SLC25A21Q9BQT8 299 aaPredicted RBP16.04■□□□□ 0.16
HPS3-202ENST00000460120 DUSP23Q9BVJ7 150 aa16.04■□□□□ 0.16
HPS3-202ENST00000460120 TMPRSS13Q9BYE2 586 aa16.04■□□□□ 0.16
HPS3-202ENST00000460120 PRDM6Q9NQX0 595 aa16.04■□□□□ 0.16
HPS3-202ENST00000460120 A0A0A6YYD4 124 aa16.04■□□□□ 0.16
HPS3-202ENST00000460120 EEF1E1-BLOC1S5C9J1V9 151 aa16.04■□□□□ 0.16
HPS3-202ENST00000460120 SIGLEC5O15389 551 aa16.04■□□□□ 0.16
HPS3-202ENST00000460120 STK17BO94768 372 aa16.04■□□□□ 0.16
HPS3-202ENST00000460120 IFNA6P05013 189 aa16.04■□□□□ 0.16
HPS3-202ENST00000460120 CCL3P10147 92 aa16.04■□□□□ 0.16
HPS3-202ENST00000460120 SIGLEC14Q08ET2 396 aa16.04■□□□□ 0.16
HPS3-202ENST00000460120 FOXRED1Q96CU9 486 aaPredicted RBP16.04■□□□□ 0.16
HPS3-202ENST00000460120 ZNF416Q9BWM5 594 aa16.04■□□□□ 0.16
HPS3-202ENST00000460120 C19orf25Q9UFG5 118 aaPredicted RBP16.04■□□□□ 0.16
HPS3-202ENST00000460120 GPN3Q9UHW5 284 aaPredicted RBP16.04■□□□□ 0.16
HPS3-202ENST00000460120 SPEF1Q9Y4P9 236 aa16.04■□□□□ 0.16
HPS3-202ENST00000460120 CHCHD2Q9Y6H1 151 aaPredicted RBP16.04■□□□□ 0.16
HPS3-202ENST00000460120 C13orf42A0A1B0GVH6 325 aa16.03■□□□□ 0.16
HPS3-202ENST00000460120 H3BUI4 141 aa16.03■□□□□ 0.16
HPS3-202ENST00000460120 TOX3O15405 576 aaPredicted RBP16.03■□□□□ 0.16
HPS3-202ENST00000460120 CAPZA1P52907 286 aa16.03■□□□□ 0.16
HPS3-202ENST00000460120 PHYHD1Q5SRE7 291 aa16.03■□□□□ 0.16
HPS3-202ENST00000460120 Q7L0L9 218 aa16.03■□□□□ 0.16
HPS3-202ENST00000460120 NAXEQ8NCW5 288 aa16.03■□□□□ 0.16
HPS3-202ENST00000460120 EML6Q6ZMW3 1958 aa16.03■□□□□ 0.16
HPS3-202ENST00000460120 OR5H15A6NDH6 313 aa16.03■□□□□ 0.16
HPS3-202ENST00000460120 OR5H14A6NHG9 310 aa16.03■□□□□ 0.16
HPS3-202ENST00000460120 SHOXO15266 292 aa16.03■□□□□ 0.16
HPS3-202ENST00000460120 SSX5O60225 188 aa16.03■□□□□ 0.16
HPS3-202ENST00000460120 MSX1P28360 303 aa16.03■□□□□ 0.16
HPS3-202ENST00000460120 BAMBIQ13145 260 aa16.03■□□□□ 0.16
HPS3-202ENST00000460120 OR10R2Q8NGX6 335 aa16.03■□□□□ 0.16
HPS3-202ENST00000460120 MARCH1Q8TCQ1 289 aa16.03■□□□□ 0.16
HPS3-202ENST00000460120 ZNF385AQ96PM9 386 aaKnown RBP16.03■□□□□ 0.16
HPS3-202ENST00000460120 ELL3Q9HB65 397 aaPredicted RBP16.03■□□□□ 0.16
HPS3-202ENST00000460120 OR14I1A6ND48 311 aa16.03■□□□□ 0.16
HPS3-202ENST00000460120 ATP1B3P54709 279 aa16.03■□□□□ 0.16
HPS3-202ENST00000460120 IL13RA1P78552 427 aa16.03■□□□□ 0.16
HPS3-202ENST00000460120 SSBP1Q04837 148 aaKnown RBP16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms