RNA–Protein interactions for RNA: ENST00000460064.1

CCDC50-203, Transcript of coiled-coil domain containing 50, humanhuman

TSL 2

Gene CCDC50, Length 420 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50-203ENST00000460064 FOXC2Q99958 501 aa3.44□□□□□ -1.86
CCDC50-203ENST00000460064 SPZ1Q9BXG8 430 aa3.44□□□□□ -1.86
CCDC50-203ENST00000460064 SPNS1Q9H2V7 528 aa3.44□□□□□ -1.86
CCDC50-203ENST00000460064 EDA2RQ9HAV5 297 aa3.44□□□□□ -1.86
CCDC50-203ENST00000460064 MED4Q9NPJ6 270 aa3.44□□□□□ -1.86
CCDC50-203ENST00000460064 MYEF2Q9P2K5 600 aaKnown RBP3.44□□□□□ -1.86
CCDC50-203ENST00000460064 ATPIF1Q9UII2 106 aa3.44□□□□□ -1.86
CCDC50-203ENST00000460064 ZNF222Q9UK12 451 aa3.44□□□□□ -1.86
CCDC50-203ENST00000460064 PSG11Q9UQ72 335 aa3.44□□□□□ -1.86
CCDC50-203ENST00000460064 RCL1Q9Y2P8 373 aaKnown RBP3.44□□□□□ -1.86
CCDC50-203ENST00000460064 GPATCH8Q9UKJ3 1502 aaKnown RBP3.44□□□□□ -1.86
CCDC50-203ENST00000460064 IGHV5-10-1A0A0J9YXX1 117 aa3.43□□□□□ -1.86
CCDC50-203ENST00000460064 A0A1W2PPV4 95 aa3.43□□□□□ -1.86
CCDC50-203ENST00000460064 MAGEB4O15481 346 aaPredicted RBP3.43□□□□□ -1.86
CCDC50-203ENST00000460064 MBP02144 154 aa3.43□□□□□ -1.86
CCDC50-203ENST00000460064 ATF6P18850 670 aa3.43□□□□□ -1.86
CCDC50-203ENST00000460064 CSNK2A2P19784 350 aaPredicted RBP3.43□□□□□ -1.86
CCDC50-203ENST00000460064 TCN2P20062 427 aa3.43□□□□□ -1.86
CCDC50-203ENST00000460064 RAB3AP20336 220 aa3.43□□□□□ -1.86
CCDC50-203ENST00000460064 KRTAP5-9P26371 169 aa3.43□□□□□ -1.86
CCDC50-203ENST00000460064 HCAR3P49019 387 aa3.43□□□□□ -1.86
CCDC50-203ENST00000460064 KDSRQ06136 332 aa3.43□□□□□ -1.86
CCDC50-203ENST00000460064 ANGPT1Q15389 498 aa3.43□□□□□ -1.86
CCDC50-203ENST00000460064 ORMDL2Q53FV1 153 aa3.43□□□□□ -1.86
CCDC50-203ENST00000460064 PLCXD3Q63HM9 321 aa3.43□□□□□ -1.86
CCDC50-203ENST00000460064 PTRHD1Q6GMV3 140 aaKnown RBP3.43□□□□□ -1.86
CCDC50-203ENST00000460064 CEMP1Q6PRD7 247 aaPredicted RBP3.43□□□□□ -1.86
CCDC50-203ENST00000460064 C15orf56Q8N910 161 aa3.43□□□□□ -1.86
CCDC50-203ENST00000460064 OR10AD1Q8NGE0 317 aa3.43□□□□□ -1.86
CCDC50-203ENST00000460064 OR51E1Q8TCB6 317 aa3.43□□□□□ -1.86
CCDC50-203ENST00000460064 PHOSPHO2Q8TCD6 241 aa3.43□□□□□ -1.86
CCDC50-203ENST00000460064 MRGPRFQ96AM1 343 aa3.43□□□□□ -1.86
CCDC50-203ENST00000460064 FOPNLQ96NB1 174 aa3.43□□□□□ -1.86
CCDC50-203ENST00000460064 NDFIP1Q9BT67 221 aa3.43□□□□□ -1.86
CCDC50-203ENST00000460064 RPP21Q9H633 154 aaKnown RBP3.43□□□□□ -1.86
CCDC50-203ENST00000460064 CHRAC1Q9NRG0 131 aa3.43□□□□□ -1.86
CCDC50-203ENST00000460064 GGA2Q9UJY4 613 aa3.43□□□□□ -1.86
CCDC50-203ENST00000460064 SAR1BQ9Y6B6 198 aa3.43□□□□□ -1.86
CCDC50-203ENST00000460064 ADCY9O60503 1353 aa3.42□□□□□ -1.86
CCDC50-203ENST00000460064 IGLV1-50A0A075B6I6 118 aa3.42□□□□□ -1.86
CCDC50-203ENST00000460064 IGKV6D-21A0A0A0MT36 114 aa3.42□□□□□ -1.86
CCDC50-203ENST00000460064 TSPAN11A1L157 253 aa3.42□□□□□ -1.86
CCDC50-203ENST00000460064 NCBP2LA6PVI3 153 aaKnown RBP3.42□□□□□ -1.86
CCDC50-203ENST00000460064 BCKDKO14874 412 aa3.42□□□□□ -1.86
CCDC50-203ENST00000460064 AQP8O94778 261 aa3.42□□□□□ -1.86
CCDC50-203ENST00000460064 MYO1DO94832 1006 aa3.42□□□□□ -1.86
CCDC50-203ENST00000460064 ERGP11308 486 aa3.42□□□□□ -1.86
CCDC50-203ENST00000460064 CCL2P13500 99 aa3.42□□□□□ -1.86
CCDC50-203ENST00000460064 IL32P24001 234 aa3.42□□□□□ -1.86
CCDC50-203ENST00000460064 RFC3P40938 356 aa3.42□□□□□ -1.86
CCDC50-203ENST00000460064 PPP1CBP62140 327 aa3.42□□□□□ -1.86
CCDC50-203ENST00000460064 PPIDQ08752 370 aaKnown RBP3.42□□□□□ -1.86
CCDC50-203ENST00000460064 ITGB3BPQ13352 177 aaPredicted RBP3.42□□□□□ -1.86
CCDC50-203ENST00000460064 ZNF266Q14584 549 aa3.42□□□□□ -1.86
CCDC50-203ENST00000460064 SNRNP35Q16560 246 aaKnown RBP3.42□□□□□ -1.86
CCDC50-203ENST00000460064 TRMT5Q32P41 509 aaKnown RBP3.42□□□□□ -1.86
CCDC50-203ENST00000460064 LRRC6Q86X45 466 aa3.42□□□□□ -1.86
CCDC50-203ENST00000460064 FAM71AQ8IYT1 594 aa3.42□□□□□ -1.86
CCDC50-203ENST00000460064 LRRC34Q8IZ02 419 aa3.42□□□□□ -1.86
CCDC50-203ENST00000460064 C8orf31Q8N9H6 132 aa3.42□□□□□ -1.86
CCDC50-203ENST00000460064 OR4A15Q8NGL6 344 aa3.42□□□□□ -1.86
CCDC50-203ENST00000460064 OR6Q1Q8NGQ2 317 aa3.42□□□□□ -1.86
CCDC50-203ENST00000460064 CACNG8Q8WXS5 425 aa3.42□□□□□ -1.86
CCDC50-203ENST00000460064 TNFRSF14Q92956 283 aa3.42□□□□□ -1.86
CCDC50-203ENST00000460064 STARD4Q96DR4 205 aa3.42□□□□□ -1.86
CCDC50-203ENST00000460064 PDXPQ96GD0 296 aa3.42□□□□□ -1.86
CCDC50-203ENST00000460064 OPALINQ96PE5 141 aa3.42□□□□□ -1.86
CCDC50-203ENST00000460064 SAV1Q9H4B6 383 aaPredicted RBP3.42□□□□□ -1.86
CCDC50-203ENST00000460064 UBE2ZQ9H832 354 aaPredicted RBP3.42□□□□□ -1.86
CCDC50-203ENST00000460064 HMG20AQ9NP66 347 aa3.42□□□□□ -1.86
CCDC50-203ENST00000460064 MYOZ2Q9NPC6 264 aa3.42□□□□□ -1.86
CCDC50-203ENST00000460064 ENPP5Q9UJA9 477 aa3.42□□□□□ -1.86
CCDC50-203ENST00000460064 A0A1B0GUH1 482 aa3.41□□□□□ -1.86
CCDC50-203ENST00000460064 A0A1W2PRD5 423 aa3.41□□□□□ -1.86
CCDC50-203ENST00000460064 TMEM120BA0PK00 339 aa3.41□□□□□ -1.86
CCDC50-203ENST00000460064 SYCE1LA8MT33 242 aa3.41□□□□□ -1.86
CCDC50-203ENST00000460064 H7C417 338 aa3.41□□□□□ -1.86
CCDC50-203ENST00000460064 K7EMT4 169 aa3.41□□□□□ -1.86
CCDC50-203ENST00000460064 TRAPPC3O43617 180 aa3.41□□□□□ -1.86
CCDC50-203ENST00000460064 CALUO43852 315 aaPredicted RBP3.41□□□□□ -1.86
CCDC50-203ENST00000460064 RP2O75695 350 aa3.41□□□□□ -1.86
CCDC50-203ENST00000460064 ATP5HO75947 161 aa3.41□□□□□ -1.86
CCDC50-203ENST00000460064 LCA5LO95447 670 aa3.41□□□□□ -1.86
CCDC50-203ENST00000460064 KRT16P08779 473 aa3.41□□□□□ -1.86
CCDC50-203ENST00000460064 IGHV1-8P0DP01 117 aa3.41□□□□□ -1.86
CCDC50-203ENST00000460064 SPAM1P38567 509 aa3.41□□□□□ -1.86
CCDC50-203ENST00000460064 NBL1P41271 181 aa3.41□□□□□ -1.86
CCDC50-203ENST00000460064 RAB7AP51149 207 aa3.41□□□□□ -1.86
CCDC50-203ENST00000460064 CCNG1P51959 295 aa3.41□□□□□ -1.86
CCDC50-203ENST00000460064 TSPAN5P62079 268 aa3.41□□□□□ -1.86
CCDC50-203ENST00000460064 RPS15AP62244 130 aaKnown RBP3.41□□□□□ -1.86
CCDC50-203ENST00000460064 RPS23P62266 143 aaKnown RBP3.41□□□□□ -1.86
CCDC50-203ENST00000460064 RAB11AP62491 216 aa3.41□□□□□ -1.86
CCDC50-203ENST00000460064 SKP1P63208 163 aa3.41□□□□□ -1.86
CCDC50-203ENST00000460064 ART3Q13508 389 aa3.41□□□□□ -1.86
CCDC50-203ENST00000460064 DGCR6Q14129 220 aa3.41□□□□□ -1.86
CCDC50-203ENST00000460064 IRF4Q15306 451 aa3.41□□□□□ -1.86
CCDC50-203ENST00000460064 RAB11BQ15907 218 aa3.41□□□□□ -1.86
CCDC50-203ENST00000460064 TFDP3Q5H9I0 405 aa3.41□□□□□ -1.86
CCDC50-203ENST00000460064 ZNF691Q5VV52 312 aa3.41□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms