RNA–Protein interactions for RNA: ENST00000458610.6

CD28-203, Transcript of CD28 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD28, Length 705 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD28-203ENST00000458610 TMEM255AQ5JRV8 349 aa13.72□□□□□ -0.21
CD28-203ENST00000458610 AADACL4Q5VUY2 407 aa13.72□□□□□ -0.21
CD28-203ENST00000458610 OR5AS1Q8N127 324 aa13.72□□□□□ -0.21
CD28-203ENST00000458610 CBR4Q8N4T8 237 aa13.72□□□□□ -0.21
CD28-203ENST00000458610 CCL17Q92583 94 aa13.72□□□□□ -0.21
CD28-203ENST00000458610 EME1Q96AY2 570 aa13.72□□□□□ -0.21
CD28-203ENST00000458610 SLC30A2Q9BRI3 323 aa13.72□□□□□ -0.21
CD28-203ENST00000458610 REPIN1Q9BWE0 567 aaKnown RBP13.72□□□□□ -0.21
CD28-203ENST00000458610 MROQ9BYG7 248 aa13.72□□□□□ -0.21
CD28-203ENST00000458610 OR10A2Q9H208 303 aa13.72□□□□□ -0.21
CD28-203ENST00000458610 RGCCQ9H4X1 137 aa13.72□□□□□ -0.21
CD28-203ENST00000458610 YAE1D1Q9NRH1 226 aa13.72□□□□□ -0.21
CD28-203ENST00000458610 IMPAD1Q9NX62 359 aa13.72□□□□□ -0.21
CD28-203ENST00000458610 ACOD1A6NK06 481 aa13.71□□□□□ -0.21
CD28-203ENST00000458610 SNTNA6NMZ2 147 aa13.71□□□□□ -0.21
CD28-203ENST00000458610 CD300LBA8K4G0 201 aa13.71□□□□□ -0.21
CD28-203ENST00000458610 TBX1O43435 398 aa13.71□□□□□ -0.21
CD28-203ENST00000458610 LILRA1O75019 489 aa13.71□□□□□ -0.21
CD28-203ENST00000458610 RP2O75695 350 aa13.71□□□□□ -0.21
CD28-203ENST00000458610 POLR2IP36954 125 aaKnown RBP13.71□□□□□ -0.21
CD28-203ENST00000458610 MZT1Q08AG7 82 aa13.71□□□□□ -0.21
CD28-203ENST00000458610 TIGD6Q17RP2 521 aa13.71□□□□□ -0.21
CD28-203ENST00000458610 Q6ZR03 302 aa13.71□□□□□ -0.21
CD28-203ENST00000458610 ITFG2Q969R8 447 aa13.71□□□□□ -0.21
CD28-203ENST00000458610 PGAM5Q96HS1 289 aa13.71□□□□□ -0.21
CD28-203ENST00000458610 HRASLS5Q96KN8 279 aa13.71□□□□□ -0.21
CD28-203ENST00000458610 CCDC182A6NF36 153 aa13.7□□□□□ -0.22
CD28-203ENST00000458610 A8MV72 311 aaPredicted RBP13.7□□□□□ -0.22
CD28-203ENST00000458610 SLC2A1P11166 492 aa13.7□□□□□ -0.22
CD28-203ENST00000458610 DCTDP32321 178 aa13.7□□□□□ -0.22
CD28-203ENST00000458610 ATP6V1E1P36543 226 aa13.7□□□□□ -0.22
CD28-203ENST00000458610 ZNF92Q03936 586 aa13.7□□□□□ -0.22
CD28-203ENST00000458610 ZSCAN26Q16670 478 aa13.7□□□□□ -0.22
CD28-203ENST00000458610 SNAI3Q3KNW1 292 aa13.7□□□□□ -0.22
CD28-203ENST00000458610 GLYATL3Q5SZD4 288 aa13.7□□□□□ -0.22
CD28-203ENST00000458610 FAM57BQ71RH2 274 aa13.7□□□□□ -0.22
CD28-203ENST00000458610 KLBQ86Z14 1044 aa13.7□□□□□ -0.22
CD28-203ENST00000458610 SPERTQ8NA61 448 aa13.7□□□□□ -0.22
CD28-203ENST00000458610 BHLHE23Q8NDY6 225 aa13.7□□□□□ -0.22
CD28-203ENST00000458610 SPSB4Q96A44 273 aa13.7□□□□□ -0.22
CD28-203ENST00000458610 C8orf4Q9NR00 106 aa13.7□□□□□ -0.22
CD28-203ENST00000458610 MRPL15Q9P015 296 aaKnown RBP13.7□□□□□ -0.22
CD28-203ENST00000458610 ZNF391Q9UJN7 358 aa13.7□□□□□ -0.22
CD28-203ENST00000458610 ZNF670-ZNF695F2Z2N8 137 aa13.69□□□□□ -0.22
CD28-203ENST00000458610 MPZL2O60487 215 aa13.69□□□□□ -0.22
CD28-203ENST00000458610 GMDSO60547 372 aa13.69□□□□□ -0.22
CD28-203ENST00000458610 MRPL3P09001 348 aaKnown RBP13.69□□□□□ -0.22
CD28-203ENST00000458610 IGHV4-31P0DP07 118 aa13.69□□□□□ -0.22
CD28-203ENST00000458610 ANPEPP15144 967 aa13.69□□□□□ -0.22
CD28-203ENST00000458610 HTR1FP30939 366 aa13.69□□□□□ -0.22
CD28-203ENST00000458610 ZNF121P58317 390 aaPredicted RBP13.69□□□□□ -0.22
CD28-203ENST00000458610 ROM1Q03395 351 aa13.69□□□□□ -0.22
CD28-203ENST00000458610 ZIK1Q3SY52 487 aaPredicted RBP13.69□□□□□ -0.22
CD28-203ENST00000458610 MEDAGQ5VYS4 303 aa13.69□□□□□ -0.22
CD28-203ENST00000458610 LRRN1Q6UXK5 716 aa13.69□□□□□ -0.22
CD28-203ENST00000458610 ZNF679Q8IYX0 411 aa13.69□□□□□ -0.22
CD28-203ENST00000458610 FTMTQ8N4E7 242 aa13.69□□□□□ -0.22
CD28-203ENST00000458610 CELF2-AS1Q8N7Q2 184 aa13.69□□□□□ -0.22
CD28-203ENST00000458610 FAM81AQ8TBF8 368 aa13.69□□□□□ -0.22
CD28-203ENST00000458610 ITLN1Q8WWA0 313 aa13.69□□□□□ -0.22
CD28-203ENST00000458610 ERGIC1Q969X5 290 aa13.69□□□□□ -0.22
CD28-203ENST00000458610 SGK3Q96BR1 496 aa13.69□□□□□ -0.22
CD28-203ENST00000458610 OR2V2Q96R30 315 aa13.69□□□□□ -0.22
CD28-203ENST00000458610 AMELYQ99218 206 aa13.69□□□□□ -0.22
CD28-203ENST00000458610 CLN6Q9NWW5 311 aa13.69□□□□□ -0.22
CD28-203ENST00000458610 DNAJC27Q9NZQ0 273 aa13.69□□□□□ -0.22
CD28-203ENST00000458610 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP13.69□□□□□ -0.22
CD28-203ENST00000458610 PPP1R3CQ9UQK1 317 aa13.69□□□□□ -0.22
CD28-203ENST00000458610 CELSR1Q9NYQ6 3014 aa13.69□□□□□ -0.22
CD28-203ENST00000458610 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP13.68□□□□□ -0.22
CD28-203ENST00000458610 LOC100289279A0A1B0GTE1 492 aa13.68□□□□□ -0.22
CD28-203ENST00000458610 A0A1B0GWJ7 208 aa13.68□□□□□ -0.22
CD28-203ENST00000458610 LRP5LA4QPB2 252 aa13.68□□□□□ -0.22
CD28-203ENST00000458610 LRRC30A6NM36 301 aa13.68□□□□□ -0.22
CD28-203ENST00000458610 ANKRD30BLA7E2S9 258 aa13.68□□□□□ -0.22
CD28-203ENST00000458610 SBK2P0C263 348 aa13.68□□□□□ -0.22
CD28-203ENST00000458610 RIDAP52758 137 aaKnown RBP13.68□□□□□ -0.22
CD28-203ENST00000458610 PSMA6P60900 246 aaKnown RBP13.68□□□□□ -0.22
CD28-203ENST00000458610 MVKQ03426 396 aa13.68□□□□□ -0.22
CD28-203ENST00000458610 KRTAP1-1Q07627 177 aa13.68□□□□□ -0.22
CD28-203ENST00000458610 TRIP10Q15642 601 aa13.68□□□□□ -0.22
CD28-203ENST00000458610 SLC25A30Q5SVS4 291 aa13.68□□□□□ -0.22
CD28-203ENST00000458610 FAM166AQ6J272 317 aa13.68□□□□□ -0.22
CD28-203ENST00000458610 BCDIN3DQ7Z5W3 292 aaKnown RBP13.68□□□□□ -0.22
CD28-203ENST00000458610 SLC35F2Q8IXU6 374 aa13.68□□□□□ -0.22
CD28-203ENST00000458610 LINC01356Q8N9X3 169 aa13.68□□□□□ -0.22
CD28-203ENST00000458610 CSNK2A3Q8NEV1 391 aa13.68□□□□□ -0.22
CD28-203ENST00000458610 OR2AE1Q8NHA4 323 aa13.68□□□□□ -0.22
CD28-203ENST00000458610 REEP6Q96HR9 211 aa13.68□□□□□ -0.22
CD28-203ENST00000458610 OR8B4Q96RC9 309 aa13.68□□□□□ -0.22
CD28-203ENST00000458610 BRD7Q9NPI1 651 aa13.68□□□□□ -0.22
CD28-203ENST00000458610 TMEM106BQ9NUM4 274 aa13.68□□□□□ -0.22
CD28-203ENST00000458610 IKZF2Q9UKS7 526 aa13.68□□□□□ -0.22
CD28-203ENST00000458610 GMPPBQ9Y5P6 360 aa13.68□□□□□ -0.22
CD28-203ENST00000458610 M0R129 80 aa13.67□□□□□ -0.22
CD28-203ENST00000458610 TGFAP01135 160 aa13.67□□□□□ -0.22
CD28-203ENST00000458610 OR2T7P0C7T2 308 aa13.67□□□□□ -0.22
CD28-203ENST00000458610 PCMT1P22061 227 aa13.67□□□□□ -0.22
CD28-203ENST00000458610 HCCSP53701 268 aa13.67□□□□□ -0.22
CD28-203ENST00000458610 SNRPGP62308 76 aaKnown RBP13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 86.4 ms