RNA–Protein interactions for RNA: ENST00000455359.5

HMGXB4-204, Transcript of HMG-box containing 4, humanhuman

TSL 1 (best)

Gene HMGXB4, Length 1,325 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-204ENST00000455359 CXorf56Q9H5V9 222 aa12.28□□□□□ -0.44
HMGXB4-204ENST00000455359 FAM206AQ9NX38 181 aa12.28□□□□□ -0.44
HMGXB4-204ENST00000455359 DUSP13Q9UII6 198 aa12.28□□□□□ -0.44
HMGXB4-204ENST00000455359 ST6GALNAC2Q9UJ37 374 aa12.28□□□□□ -0.44
HMGXB4-204ENST00000455359 GNG8Q9UK08 70 aa12.28□□□□□ -0.44
HMGXB4-204ENST00000455359 LAMP3Q9UQV4 416 aa12.28□□□□□ -0.44
HMGXB4-204ENST00000455359 PMF1-BGLAPU3KQ54 211 aa12.28□□□□□ -0.44
HMGXB4-204ENST00000455359 SETXQ7Z333 2677 aaKnown RBP12.28□□□□□ -0.44
HMGXB4-204ENST00000455359 HRNRQ86YZ3 2850 aaPredicted RBP12.27□□□□□ -0.44
HMGXB4-204ENST00000455359 NBPF19A0A087WUL8 3843 aa12.27□□□□□ -0.45
HMGXB4-204ENST00000455359 A0A0U1RQV5 110 aa12.27□□□□□ -0.45
HMGXB4-204ENST00000455359 MRPS14O60783 128 aaKnown RBP12.27□□□□□ -0.45
HMGXB4-204ENST00000455359 CD8AP01732 235 aa12.27□□□□□ -0.45
HMGXB4-204ENST00000455359 PAX1P15863 534 aa12.27□□□□□ -0.45
HMGXB4-204ENST00000455359 CRHBPP24387 322 aa12.27□□□□□ -0.45
HMGXB4-204ENST00000455359 DNASE1P24855 282 aa12.27□□□□□ -0.45
HMGXB4-204ENST00000455359 PPOXP50336 477 aa12.27□□□□□ -0.45
HMGXB4-204ENST00000455359 SLC35A2P78381 396 aa12.27□□□□□ -0.45
HMGXB4-204ENST00000455359 GK2Q14410 553 aaPredicted RBP12.27□□□□□ -0.45
HMGXB4-204ENST00000455359 SNAI3Q3KNW1 292 aa12.27□□□□□ -0.45
HMGXB4-204ENST00000455359 ZMAT1Q5H9K5 638 aa12.27□□□□□ -0.45
HMGXB4-204ENST00000455359 C11orf71Q6IPW1 123 aa12.27□□□□□ -0.45
HMGXB4-204ENST00000455359 AHSA2Q719I0 299 aa12.27□□□□□ -0.45
HMGXB4-204ENST00000455359 FAM57BQ71RH2 274 aa12.27□□□□□ -0.45
HMGXB4-204ENST00000455359 PGAP1Q75T13 922 aa12.27□□□□□ -0.45
HMGXB4-204ENST00000455359 LHFPL3Q86UP9 236 aa12.27□□□□□ -0.45
HMGXB4-204ENST00000455359 KLHL36Q8N4N3 616 aa12.27□□□□□ -0.45
HMGXB4-204ENST00000455359 OR52N1Q8NH53 320 aa12.27□□□□□ -0.45
HMGXB4-204ENST00000455359 CDCA4Q9BXL8 241 aa12.27□□□□□ -0.45
HMGXB4-204ENST00000455359 MS4A5Q9H3V2 200 aa12.27□□□□□ -0.45
HMGXB4-204ENST00000455359 PCDHGB5Q9Y5G0 923 aa12.27□□□□□ -0.45
HMGXB4-204ENST00000455359 A0A1W2PPW3 197 aa12.26□□□□□ -0.45
HMGXB4-204ENST00000455359 TMEM129A0AVI4 362 aa12.26□□□□□ -0.45
HMGXB4-204ENST00000455359 LOC110117498-PIK3R3F6TDL0 507 aa12.26□□□□□ -0.45
HMGXB4-204ENST00000455359 H7C417 338 aa12.26□□□□□ -0.45
HMGXB4-204ENST00000455359 OVOL3O00110 214 aa12.26□□□□□ -0.45
HMGXB4-204ENST00000455359 PSMD9O00233 223 aa12.26□□□□□ -0.45
HMGXB4-204ENST00000455359 SRSF10O75494 262 aaKnown RBP12.26□□□□□ -0.45
HMGXB4-204ENST00000455359 CDK1P06493 297 aa12.26□□□□□ -0.45
HMGXB4-204ENST00000455359 SLC2A1P11166 492 aa12.26□□□□□ -0.45
HMGXB4-204ENST00000455359 ATP6V1B1P15313 513 aa12.26□□□□□ -0.45
HMGXB4-204ENST00000455359 CD53P19397 219 aa12.26□□□□□ -0.45
HMGXB4-204ENST00000455359 DDOSTP39656 456 aa12.26□□□□□ -0.45
HMGXB4-204ENST00000455359 CCR9P51686 369 aa12.26□□□□□ -0.45
HMGXB4-204ENST00000455359 ERVS71-1P61550 626 aa12.26□□□□□ -0.45
HMGXB4-204ENST00000455359 PSG7Q13046 419 aa12.26□□□□□ -0.45
HMGXB4-204ENST00000455359 TIGD6Q17RP2 521 aa12.26□□□□□ -0.45
HMGXB4-204ENST00000455359 MSMPQ1L6U9 139 aa12.26□□□□□ -0.45
HMGXB4-204ENST00000455359 SPATA46Q5T0L3 261 aa12.26□□□□□ -0.45
HMGXB4-204ENST00000455359 BCL2L15Q5TBC7 163 aa12.26□□□□□ -0.45
HMGXB4-204ENST00000455359 MRPL21Q7Z2W9 205 aaKnown RBP12.26□□□□□ -0.45
HMGXB4-204ENST00000455359 ELMOD2Q8IZ81 293 aa12.26□□□□□ -0.45
HMGXB4-204ENST00000455359 ZNF786Q8N393 782 aa12.26□□□□□ -0.45
HMGXB4-204ENST00000455359 CCDC54Q8NEL0 328 aa12.26□□□□□ -0.45
HMGXB4-204ENST00000455359 RORBQ92753 470 aa12.26□□□□□ -0.45
HMGXB4-204ENST00000455359 SGK3Q96BR1 496 aa12.26□□□□□ -0.45
HMGXB4-204ENST00000455359 CMBLQ96DG6 245 aa12.26□□□□□ -0.45
HMGXB4-204ENST00000455359 SIGLEC11Q96RL6 698 aa12.26□□□□□ -0.45
HMGXB4-204ENST00000455359 TTTY10Q9BZA0 68 aa12.26□□□□□ -0.45
HMGXB4-204ENST00000455359 PBOV1Q9GZY1 135 aa12.26□□□□□ -0.45
HMGXB4-204ENST00000455359 BEX4Q9NWD9 120 aaPredicted RBP12.26□□□□□ -0.45
HMGXB4-204ENST00000455359 UBAP1Q9NZ09 502 aa12.26□□□□□ -0.45
HMGXB4-204ENST00000455359 PTTG3PQ9NZH4 202 aa12.26□□□□□ -0.45
HMGXB4-204ENST00000455359 ERGIC3Q9Y282 383 aa12.26□□□□□ -0.45
HMGXB4-204ENST00000455359 HEATR1Q9H583 2144 aaKnown RBP12.25□□□□□ -0.45
HMGXB4-204ENST00000455359 PLSCR5A0PG75 271 aa12.25□□□□□ -0.45
HMGXB4-204ENST00000455359 PTGES3LE9PB15 166 aa12.25□□□□□ -0.45
HMGXB4-204ENST00000455359 J3QLW9 94 aa12.25□□□□□ -0.45
HMGXB4-204ENST00000455359 M0R233 179 aa12.25□□□□□ -0.45
HMGXB4-204ENST00000455359 MAGEB4O15481 346 aaPredicted RBP12.25□□□□□ -0.45
HMGXB4-204ENST00000455359 TBX1O43435 398 aa12.25□□□□□ -0.45
HMGXB4-204ENST00000455359 PNPP00491 289 aa12.25□□□□□ -0.45
HMGXB4-204ENST00000455359 ZNF19P17023 458 aa12.25□□□□□ -0.45
HMGXB4-204ENST00000455359 TGM4P49221 684 aa12.25□□□□□ -0.45
HMGXB4-204ENST00000455359 GBX2P52951 348 aaPredicted RBP12.25□□□□□ -0.45
HMGXB4-204ENST00000455359 OR12D2P58182 307 aa12.25□□□□□ -0.45
HMGXB4-204ENST00000455359 GABARAPL2P60520 117 aa12.25□□□□□ -0.45
HMGXB4-204ENST00000455359 ZNF92Q03936 586 aa12.25□□□□□ -0.45
HMGXB4-204ENST00000455359 CCDC58Q4VC31 144 aa12.25□□□□□ -0.45
HMGXB4-204ENST00000455359 TP53I3Q53FA7 332 aa12.25□□□□□ -0.45
HMGXB4-204ENST00000455359 GLYATL3Q5SZD4 288 aa12.25□□□□□ -0.45
HMGXB4-204ENST00000455359 CATSPERDQ86XM0 798 aa12.25□□□□□ -0.45
HMGXB4-204ENST00000455359 REEP6Q96HR9 211 aa12.25□□□□□ -0.45
HMGXB4-204ENST00000455359 C4orf36Q96KX1 117 aa12.25□□□□□ -0.45
HMGXB4-204ENST00000455359 SYT3Q9BQG1 590 aa12.25□□□□□ -0.45
HMGXB4-204ENST00000455359 RHNO1Q9BSD3 238 aa12.25□□□□□ -0.45
HMGXB4-204ENST00000455359 SLC22A4Q9H015 551 aa12.25□□□□□ -0.45
HMGXB4-204ENST00000455359 G6PC2Q9NQR9 355 aa12.25□□□□□ -0.45
HMGXB4-204ENST00000455359 ACOXLQ9NUZ1 547 aa12.25□□□□□ -0.45
HMGXB4-204ENST00000455359 ZNF701Q9NV72 531 aaPredicted RBP12.25□□□□□ -0.45
HMGXB4-204ENST00000455359 BABAM2Q9NXR7 383 aa12.25□□□□□ -0.45
HMGXB4-204ENST00000455359 TAAR3PQ9P1P4 343 aa12.25□□□□□ -0.45
HMGXB4-204ENST00000455359 PURGQ9UJV8 347 aaKnown RBP12.25□□□□□ -0.45
HMGXB4-204ENST00000455359 OR52A1Q9UKL2 312 aa12.25□□□□□ -0.45
HMGXB4-204ENST00000455359 LOC390937A0A1W2PQ73 354 aa12.24□□□□□ -0.45
HMGXB4-204ENST00000455359 IQCF6A8MYZ5 107 aa12.24□□□□□ -0.45
HMGXB4-204ENST00000455359 RGS10O43665 173 aa12.24□□□□□ -0.45
HMGXB4-204ENST00000455359 TIMM8AO60220 97 aaPredicted RBP12.24□□□□□ -0.45
HMGXB4-204ENST00000455359 RPP14O95059 124 aaKnown RBP12.24□□□□□ -0.45
HMGXB4-204ENST00000455359 CLPTM1O96005 669 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms