RNA–Protein interactions for RNA: ENST00000454952.1

NIF3L1-209, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 5

Gene NIF3L1, Length 719 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-209ENST00000454952 HNRNPA0Q13151 305 aaKnown RBP6.66□□□□□ -1.34
NIF3L1-209ENST00000454952 GK2Q14410 553 aaPredicted RBP6.66□□□□□ -1.34
NIF3L1-209ENST00000454952 C2orf68Q2NKX9 166 aa6.66□□□□□ -1.34
NIF3L1-209ENST00000454952 KRTAP27-1Q3LI81 207 aa6.66□□□□□ -1.34
NIF3L1-209ENST00000454952 ZNF841Q6ZN19 808 aa6.66□□□□□ -1.34
NIF3L1-209ENST00000454952 CBLL1Q75N03 491 aa6.66□□□□□ -1.34
NIF3L1-209ENST00000454952 PGAP1Q75T13 922 aa6.66□□□□□ -1.34
NIF3L1-209ENST00000454952 VTCN1Q7Z7D3 282 aa6.66□□□□□ -1.34
NIF3L1-209ENST00000454952 LDLRAD3Q86YD5 345 aa6.66□□□□□ -1.34
NIF3L1-209ENST00000454952 SCCPDHQ8NBX0 429 aa6.66□□□□□ -1.34
NIF3L1-209ENST00000454952 OR4C15Q8NGM1 316 aa6.66□□□□□ -1.34
NIF3L1-209ENST00000454952 NPRL2Q8WTW4 380 aa6.66□□□□□ -1.34
NIF3L1-209ENST00000454952 SPTSSAQ969W0 71 aa6.66□□□□□ -1.34
NIF3L1-209ENST00000454952 FAM46AQ96IP4 442 aaKnown RBP6.66□□□□□ -1.34
NIF3L1-209ENST00000454952 RSRC1Q96IZ7 334 aaKnown RBP6.66□□□□□ -1.34
NIF3L1-209ENST00000454952 PITX2Q99697 317 aa6.66□□□□□ -1.34
NIF3L1-209ENST00000454952 ATF6BQ99941 703 aa6.66□□□□□ -1.34
NIF3L1-209ENST00000454952 PKP2Q99959 881 aa6.66□□□□□ -1.34
NIF3L1-209ENST00000454952 RBM4BQ9BQ04 359 aaKnown RBP6.66□□□□□ -1.34
NIF3L1-209ENST00000454952 OPA3Q9H6K4 179 aa6.66□□□□□ -1.34
NIF3L1-209ENST00000454952 TCF7L1Q9HCS4 588 aa6.66□□□□□ -1.34
NIF3L1-209ENST00000454952 TNFRSF19Q9NS68 423 aa6.66□□□□□ -1.34
NIF3L1-209ENST00000454952 TMCC3Q9ULS5 477 aa6.66□□□□□ -1.34
NIF3L1-209ENST00000454952 FAM96BQ9Y3D0 163 aa6.66□□□□□ -1.34
NIF3L1-209ENST00000454952 IER3IP1Q9Y5U9 82 aa6.66□□□□□ -1.34
NIF3L1-209ENST00000454952 LHFPL6Q9Y693 200 aa6.66□□□□□ -1.34
NIF3L1-209ENST00000454952 CAPN7Q9Y6W3 813 aa6.66□□□□□ -1.34
NIF3L1-209ENST00000454952 ENPP4Q9Y6X5 453 aa6.66□□□□□ -1.34
NIF3L1-209ENST00000454952 IGHV3-64DA0A0J9YX35 117 aa6.65□□□□□ -1.34
NIF3L1-209ENST00000454952 CENPVL3A0A0U1RRI6 287 aa6.65□□□□□ -1.34
NIF3L1-209ENST00000454952 LOC100653049A0A140TA62 436 aa6.65□□□□□ -1.34
NIF3L1-209ENST00000454952 A0A1B0GVI7 797 aa6.65□□□□□ -1.34
NIF3L1-209ENST00000454952 C5orf63A6NC05 138 aa6.65□□□□□ -1.34
NIF3L1-209ENST00000454952 OOEPA6NGQ2 149 aa6.65□□□□□ -1.34
NIF3L1-209ENST00000454952 UNC119BA6NIH7 251 aa6.65□□□□□ -1.34
NIF3L1-209ENST00000454952 F5H5K5 113 aa6.65□□□□□ -1.34
NIF3L1-209ENST00000454952 J3KTA2 159 aa6.65□□□□□ -1.34
NIF3L1-209ENST00000454952 ADAM20O43506 726 aa6.65□□□□□ -1.34
NIF3L1-209ENST00000454952 IDH3BO43837 385 aa6.65□□□□□ -1.34
NIF3L1-209ENST00000454952 GPR137BO60478 399 aa6.65□□□□□ -1.34
NIF3L1-209ENST00000454952 KRT34O76011 436 aa6.65□□□□□ -1.34
NIF3L1-209ENST00000454952 PTBP3O95758 552 aaKnown RBP6.65□□□□□ -1.34
NIF3L1-209ENST00000454952 GHRHP01286 108 aa6.65□□□□□ -1.34
NIF3L1-209ENST00000454952 HLA-DPB1P04440 258 aa6.65□□□□□ -1.34
NIF3L1-209ENST00000454952 SFTPBP07988 381 aa6.65□□□□□ -1.34
NIF3L1-209ENST00000454952 MMP9P14780 707 aa6.65□□□□□ -1.34
NIF3L1-209ENST00000454952 ZNF26P17031 533 aaPredicted RBP6.65□□□□□ -1.34
NIF3L1-209ENST00000454952 RHCEP18577 417 aa6.65□□□□□ -1.34
NIF3L1-209ENST00000454952 SLC6A6P31641 620 aa6.65□□□□□ -1.34
NIF3L1-209ENST00000454952 GRK5P34947 590 aa6.65□□□□□ -1.34
NIF3L1-209ENST00000454952 GGT2P36268 569 aa6.65□□□□□ -1.34
NIF3L1-209ENST00000454952 MDH1P40925 334 aaKnown RBP6.65□□□□□ -1.34
NIF3L1-209ENST00000454952 LIPEQ05469 1076 aa6.65□□□□□ -1.34
NIF3L1-209ENST00000454952 TRAP1Q12931 704 aaKnown RBP6.65□□□□□ -1.34
NIF3L1-209ENST00000454952 MAB21L1Q13394 359 aa6.65□□□□□ -1.34
NIF3L1-209ENST00000454952 KRT72Q14CN4 511 aa6.65□□□□□ -1.34
NIF3L1-209ENST00000454952 OR8B8Q15620 311 aa6.65□□□□□ -1.34
NIF3L1-209ENST00000454952 FGD3Q5JSP0 725 aa6.65□□□□□ -1.34
NIF3L1-209ENST00000454952 CLEC12AQ5QGZ9 265 aa6.65□□□□□ -1.34
NIF3L1-209ENST00000454952 FAM201AQ5SY85 155 aa6.65□□□□□ -1.34
NIF3L1-209ENST00000454952 SLC18B1Q6NT16 456 aa6.65□□□□□ -1.34
NIF3L1-209ENST00000454952 TBPL2Q6SJ96 375 aa6.65□□□□□ -1.34
NIF3L1-209ENST00000454952 SMARCD3Q6STE5 483 aa6.65□□□□□ -1.34
NIF3L1-209ENST00000454952 LYPD2Q6UXB3 125 aa6.65□□□□□ -1.34
NIF3L1-209ENST00000454952 ZSCAN2Q7Z7L9 614 aaPredicted RBP6.65□□□□□ -1.34
NIF3L1-209ENST00000454952 CMTM4Q8IZR5 234 aa6.65□□□□□ -1.34
NIF3L1-209ENST00000454952 SLC26A10Q8NG04 563 aa6.65□□□□□ -1.34
NIF3L1-209ENST00000454952 SLC7A13Q8TCU3 470 aa6.65□□□□□ -1.34
NIF3L1-209ENST00000454952 TBX15Q96SF7 602 aa6.65□□□□□ -1.34
NIF3L1-209ENST00000454952 HOPXQ9BPY8 73 aaPredicted RBP6.65□□□□□ -1.34
NIF3L1-209ENST00000454952 ADAT1Q9BUB4 502 aaKnown RBP6.65□□□□□ -1.34
NIF3L1-209ENST00000454952 SRA1Q9HD15 236 aaKnown RBP6.65□□□□□ -1.34
NIF3L1-209ENST00000454952 SAR1AQ9NR31 198 aa6.65□□□□□ -1.34
NIF3L1-209ENST00000454952 UFSP2Q9NUQ7 469 aa6.65□□□□□ -1.34
NIF3L1-209ENST00000454952 C14orf119Q9NWQ9 140 aa6.65□□□□□ -1.34
NIF3L1-209ENST00000454952 MRPL15Q9P015 296 aaKnown RBP6.65□□□□□ -1.34
NIF3L1-209ENST00000454952 B9D1Q9UPM9 204 aa6.65□□□□□ -1.34
NIF3L1-209ENST00000454952 SNX13Q9Y5W8 968 aa6.65□□□□□ -1.34
NIF3L1-209ENST00000454952 SOX21Q9Y651 276 aaPredicted RBP6.65□□□□□ -1.34
NIF3L1-209ENST00000454952 KPTNQ9Y664 436 aa6.65□□□□□ -1.34
NIF3L1-209ENST00000454952 ELOA3CA0A087WX78 387 aaPredicted RBP6.64□□□□□ -1.35
NIF3L1-209ENST00000454952 IGLV1-36A0A0B4J1U3 117 aa6.64□□□□□ -1.35
NIF3L1-209ENST00000454952 GGT3PA6NGU5 568 aa6.64□□□□□ -1.35
NIF3L1-209ENST00000454952 A6NLC8 198 aa6.64□□□□□ -1.35
NIF3L1-209ENST00000454952 CD300LBA8K4G0 201 aa6.64□□□□□ -1.35
NIF3L1-209ENST00000454952 M0R135 149 aa6.64□□□□□ -1.35
NIF3L1-209ENST00000454952 ARPC3O15145 178 aa6.64□□□□□ -1.35
NIF3L1-209ENST00000454952 GMNNO75496 209 aa6.64□□□□□ -1.35
NIF3L1-209ENST00000454952 PPP1R3DO95685 299 aa6.64□□□□□ -1.35
NIF3L1-209ENST00000454952 SERPINA1P01009 418 aa6.64□□□□□ -1.35
NIF3L1-209ENST00000454952 HLA-DQA2P01906 255 aa6.64□□□□□ -1.35
NIF3L1-209ENST00000454952 FBP1P09467 338 aa6.64□□□□□ -1.35
NIF3L1-209ENST00000454952 ZNF823P16415 610 aa6.64□□□□□ -1.35
NIF3L1-209ENST00000454952 CA6P23280 308 aa6.64□□□□□ -1.35
NIF3L1-209ENST00000454952 EEF1B2P24534 225 aaKnown RBP6.64□□□□□ -1.35
NIF3L1-209ENST00000454952 NOS3P29474 1203 aa6.64□□□□□ -1.35
NIF3L1-209ENST00000454952 RBMXP38159 391 aaKnown RBP6.64□□□□□ -1.35
NIF3L1-209ENST00000454952 IFNGR2P38484 337 aa6.64□□□□□ -1.35
NIF3L1-209ENST00000454952 DDOSTP39656 456 aa6.64□□□□□ -1.35
NIF3L1-209ENST00000454952 CDKN2AP42771 156 aaKnown RBP6.64□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms