RNA–Protein interactions for RNA: ENST00000454240.1

SMARCC1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 3

Gene SMARCC1, Length 636 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-203ENST00000454240 XRCC2O43543 280 aa23.83■■□□□ 1.41
SMARCC1-203ENST00000454240 IGHV1-46P01743 117 aa23.83■■□□□ 1.41
SMARCC1-203ENST00000454240 HPXP02790 462 aa23.83■■□□□ 1.41
SMARCC1-203ENST00000454240 DAOP14920 347 aa23.83■■□□□ 1.41
SMARCC1-203ENST00000454240 SELEP16581 610 aa23.83■■□□□ 1.41
SMARCC1-203ENST00000454240 PSMA6P60900 246 aaKnown RBP23.83■■□□□ 1.41
SMARCC1-203ENST00000454240 TNK1Q13470 666 aa23.83■■□□□ 1.41
SMARCC1-203ENST00000454240 ZMAT1Q5H9K5 638 aa23.83■■□□□ 1.41
SMARCC1-203ENST00000454240 CLEC2AQ6UVW9 174 aa23.83■■□□□ 1.41
SMARCC1-203ENST00000454240 Q6ZR03 302 aa23.83■■□□□ 1.41
SMARCC1-203ENST00000454240 FAM57BQ71RH2 274 aa23.83■■□□□ 1.41
SMARCC1-203ENST00000454240 SSX6Q7RTT6 188 aa23.83■■□□□ 1.41
SMARCC1-203ENST00000454240 TBX5Q99593 518 aa23.83■■□□□ 1.41
SMARCC1-203ENST00000454240 TMUB1Q9BVT8 246 aa23.83■■□□□ 1.41
SMARCC1-203ENST00000454240 ZDHHC8Q9ULC8 765 aa23.83■■□□□ 1.41
SMARCC1-203ENST00000454240 HIVEP1P15822 2718 aa23.82■■□□□ 1.4
SMARCC1-203ENST00000454240 TRIM64A6NGJ6 449 aa23.82■■□□□ 1.4
SMARCC1-203ENST00000454240 TRIM64BA6NI03 449 aa23.82■■□□□ 1.4
SMARCC1-203ENST00000454240 SPRY3O43610 288 aa23.82■■□□□ 1.4
SMARCC1-203ENST00000454240 WBP4O75554 376 aaKnown RBP23.82■■□□□ 1.4
SMARCC1-203ENST00000454240 NCR1O76036 304 aa23.82■■□□□ 1.4
SMARCC1-203ENST00000454240 CSF3P09919 207 aa23.82■■□□□ 1.4
SMARCC1-203ENST00000454240 CAPGP40121 348 aa23.82■■□□□ 1.4
SMARCC1-203ENST00000454240 PRSS12P56730 875 aa23.82■■□□□ 1.4
SMARCC1-203ENST00000454240 IL5RAQ01344 420 aa23.82■■□□□ 1.4
SMARCC1-203ENST00000454240 CDK5R2Q13319 367 aa23.82■■□□□ 1.4
SMARCC1-203ENST00000454240 IL18R1Q13478 541 aa23.82■■□□□ 1.4
SMARCC1-203ENST00000454240 FAM209AQ5JX71 171 aa23.82■■□□□ 1.4
SMARCC1-203ENST00000454240 MRPL21Q7Z2W9 205 aaKnown RBP23.82■■□□□ 1.4
SMARCC1-203ENST00000454240 OR5AS1Q8N127 324 aa23.82■■□□□ 1.4
SMARCC1-203ENST00000454240 OR8G5Q8NG78 346 aa23.82■■□□□ 1.4
SMARCC1-203ENST00000454240 OR10H4Q8NGA5 316 aa23.82■■□□□ 1.4
SMARCC1-203ENST00000454240 UBASH3BQ8TF42 649 aa23.82■■□□□ 1.4
SMARCC1-203ENST00000454240 SGK3Q96BR1 496 aa23.82■■□□□ 1.4
SMARCC1-203ENST00000454240 DIRC2Q96SL1 478 aa23.82■■□□□ 1.4
SMARCC1-203ENST00000454240 OPA3Q9H6K4 179 aa23.82■■□□□ 1.4
SMARCC1-203ENST00000454240 BRD7Q9NPI1 651 aa23.82■■□□□ 1.4
SMARCC1-203ENST00000454240 IKZF2Q9UKS7 526 aa23.82■■□□□ 1.4
SMARCC1-203ENST00000454240 EXOGQ9Y2C4 368 aaKnown RBP23.82■■□□□ 1.4
SMARCC1-203ENST00000454240 MAGEB4O15481 346 aaPredicted RBP23.81■■□□□ 1.4
SMARCC1-203ENST00000454240 TBX1O43435 398 aa23.81■■□□□ 1.4
SMARCC1-203ENST00000454240 DBTP11182 482 aaKnown RBP23.81■■□□□ 1.4
SMARCC1-203ENST00000454240 RIDAP52758 137 aaKnown RBP23.81■■□□□ 1.4
SMARCC1-203ENST00000454240 ISL1P61371 349 aa23.81■■□□□ 1.4
SMARCC1-203ENST00000454240 CCL8P80075 99 aa23.81■■□□□ 1.4
SMARCC1-203ENST00000454240 ZNF91Q05481 1191 aa23.81■■□□□ 1.4
SMARCC1-203ENST00000454240 ZNF786Q8N393 782 aa23.81■■□□□ 1.4
SMARCC1-203ENST00000454240 FAM168AQ92567 244 aa23.81■■□□□ 1.4
SMARCC1-203ENST00000454240 PGAM5Q96HS1 289 aa23.81■■□□□ 1.4
SMARCC1-203ENST00000454240 RHNO1Q9BSD3 238 aa23.81■■□□□ 1.4
SMARCC1-203ENST00000454240 OR10A2Q9H208 303 aa23.81■■□□□ 1.4
SMARCC1-203ENST00000454240 FAM206AQ9NX38 181 aa23.81■■□□□ 1.4
SMARCC1-203ENST00000454240 MRM2Q9UI43 246 aaKnown RBP23.81■■□□□ 1.4
SMARCC1-203ENST00000454240 MED13LQ71F56 2210 aa23.8■■□□□ 1.4
SMARCC1-203ENST00000454240 ACOD1A6NK06 481 aa23.8■■□□□ 1.4
SMARCC1-203ENST00000454240 H0YJX3 145 aa23.8■■□□□ 1.4
SMARCC1-203ENST00000454240 PDLIM4P50479 330 aa23.8■■□□□ 1.4
SMARCC1-203ENST00000454240 TSTQ16762 297 aaKnown RBP23.8■■□□□ 1.4
SMARCC1-203ENST00000454240 ZNF684Q5T5D7 378 aa23.8■■□□□ 1.4
SMARCC1-203ENST00000454240 SETD9Q8NE22 299 aa23.8■■□□□ 1.4
SMARCC1-203ENST00000454240 C10orf105Q8TEF2 133 aa23.8■■□□□ 1.4
SMARCC1-203ENST00000454240 LGALS12Q96DT0 336 aa23.8■■□□□ 1.4
SMARCC1-203ENST00000454240 SLC30A2Q9BRI3 323 aa23.8■■□□□ 1.4
SMARCC1-203ENST00000454240 PCDHGB1Q9Y5G3 927 aa23.8■■□□□ 1.4
SMARCC1-203ENST00000454240 IGHV4-30-2A0A087WSY4 118 aa23.79■■□□□ 1.4
SMARCC1-203ENST00000454240 TMEM269A0A1B0GVZ9 245 aa23.79■■□□□ 1.4
SMARCC1-203ENST00000454240 A0A1B0GWJ7 208 aa23.79■■□□□ 1.4
SMARCC1-203ENST00000454240 LOC390937A0A1W2PQ73 354 aa23.79■■□□□ 1.4
SMARCC1-203ENST00000454240 LILRA1O75019 489 aa23.79■■□□□ 1.4
SMARCC1-203ENST00000454240 ATP6V1G2O95670 118 aa23.79■■□□□ 1.4
SMARCC1-203ENST00000454240 CD55P08174 381 aa23.79■■□□□ 1.4
SMARCC1-203ENST00000454240 MMP16P51512 607 aa23.79■■□□□ 1.4
SMARCC1-203ENST00000454240 MRPS11P82912 194 aaKnown RBP23.79■■□□□ 1.4
SMARCC1-203ENST00000454240 ZNF85Q03923 595 aa23.79■■□□□ 1.4
SMARCC1-203ENST00000454240 REEP6Q96HR9 211 aa23.79■■□□□ 1.4
SMARCC1-203ENST00000454240 AMBNQ9NP70 447 aa23.79■■□□□ 1.4
SMARCC1-203ENST00000454240 DLL4Q9NR61 685 aa23.79■■□□□ 1.4
SMARCC1-203ENST00000454240 MRPS18AQ9NVS2 196 aaKnown RBP23.79■■□□□ 1.4
SMARCC1-203ENST00000454240 RPL36Q9Y3U8 105 aaKnown RBP23.79■■□□□ 1.4
SMARCC1-203ENST00000454240 HSPE1-MOB4S4R3N1 261 aa23.79■■□□□ 1.4
SMARCC1-203ENST00000454240 FLNAP21333 2647 aaKnown RBP23.78■■□□□ 1.4
SMARCC1-203ENST00000454240 CD300LBA8K4G0 201 aa23.78■■□□□ 1.4
SMARCC1-203ENST00000454240 NDUFS8O00217 210 aa23.78■■□□□ 1.4
SMARCC1-203ENST00000454240 SRSF10O75494 262 aaKnown RBP23.78■■□□□ 1.4
SMARCC1-203ENST00000454240 GNAO1P09471 354 aa23.78■■□□□ 1.4
SMARCC1-203ENST00000454240 CD99P14209 185 aa23.78■■□□□ 1.4
SMARCC1-203ENST00000454240 TIGD6Q17RP2 521 aa23.78■■□□□ 1.4
SMARCC1-203ENST00000454240 BHLHE23Q8NDY6 225 aa23.78■■□□□ 1.4
SMARCC1-203ENST00000454240 OR8B12Q8NGG6 310 aa23.78■■□□□ 1.4
SMARCC1-203ENST00000454240 OR13G1Q8NGZ3 307 aa23.78■■□□□ 1.4
SMARCC1-203ENST00000454240 TFAP2CQ92754 450 aa23.78■■□□□ 1.4
SMARCC1-203ENST00000454240 RDH5Q92781 318 aa23.78■■□□□ 1.4
SMARCC1-203ENST00000454240 RGCCQ9H4X1 137 aa23.78■■□□□ 1.4
SMARCC1-203ENST00000454240 DECR2Q9NUI1 292 aa23.78■■□□□ 1.4
SMARCC1-203ENST00000454240 LYNX1G3V0Z9 82 aa23.77■■□□□ 1.4
SMARCC1-203ENST00000454240 SULT1C4O75897 302 aa23.77■■□□□ 1.4
SMARCC1-203ENST00000454240 PNPP00491 289 aa23.77■■□□□ 1.4
SMARCC1-203ENST00000454240 KRT8P05787 483 aa23.77■■□□□ 1.4
SMARCC1-203ENST00000454240 LYNX1P0DP58 116 aa23.77■■□□□ 1.4
SMARCC1-203ENST00000454240 CFL1P23528 166 aaKnown RBP23.77■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms