RNA–Protein interactions for RNA: ENST00000453306.4

VCX3B-204, Transcript of variable charge X-linked 3B, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VCX3B, Length 868 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3B-204ENST00000453306 TAF13Q15543 124 aa13.42□□□□□ -0.26
VCX3B-204ENST00000453306 CLEC12BQ2HXU8 276 aa13.42□□□□□ -0.26
VCX3B-204ENST00000453306 OR2G6Q5TZ20 316 aa13.42□□□□□ -0.26
VCX3B-204ENST00000453306 LIPNQ5VXI9 398 aa13.42□□□□□ -0.26
VCX3B-204ENST00000453306 ZNF540Q8NDQ6 660 aa13.42□□□□□ -0.26
VCX3B-204ENST00000453306 SPATA3Q8NHX4 192 aa13.42□□□□□ -0.26
VCX3B-204ENST00000453306 ABHD4Q8TB40 342 aa13.42□□□□□ -0.26
VCX3B-204ENST00000453306 SLC25A40Q8TBP6 338 aa13.42□□□□□ -0.26
VCX3B-204ENST00000453306 RORBQ92753 470 aa13.42□□□□□ -0.26
VCX3B-204ENST00000453306 SGK3Q96BR1 496 aa13.42□□□□□ -0.26
VCX3B-204ENST00000453306 TMEM80Q96HE8 168 aa13.42□□□□□ -0.26
VCX3B-204ENST00000453306 DCLRE1CQ96SD1 692 aaKnown RBP13.42□□□□□ -0.26
VCX3B-204ENST00000453306 ALG8Q9BVK2 526 aa13.42□□□□□ -0.26
VCX3B-204ENST00000453306 ACOXLQ9NUZ1 547 aa13.42□□□□□ -0.26
VCX3B-204ENST00000453306 MYEF2Q9P2K5 600 aaKnown RBP13.42□□□□□ -0.26
VCX3B-204ENST00000453306 IKZF2Q9UKS7 526 aa13.42□□□□□ -0.26
VCX3B-204ENST00000453306 ZNF254O75437 659 aa13.41□□□□□ -0.26
VCX3B-204ENST00000453306 CRLF1O75462 422 aa13.41□□□□□ -0.26
VCX3B-204ENST00000453306 CLPTM1O96005 669 aa13.41□□□□□ -0.26
VCX3B-204ENST00000453306 LALBAP00709 142 aa13.41□□□□□ -0.26
VCX3B-204ENST00000453306 LCATP04180 440 aa13.41□□□□□ -0.26
VCX3B-204ENST00000453306 SOD3P08294 240 aa13.41□□□□□ -0.26
VCX3B-204ENST00000453306 DANCRP0C864 163 aa13.41□□□□□ -0.26
VCX3B-204ENST00000453306 TPTEP56180 551 aa13.41□□□□□ -0.26
VCX3B-204ENST00000453306 CSNK2BP67870 215 aa13.41□□□□□ -0.26
VCX3B-204ENST00000453306 HLXQ14774 488 aaPredicted RBP13.41□□□□□ -0.26
VCX3B-204ENST00000453306 XAF1Q6GPH4 301 aa13.41□□□□□ -0.26
VCX3B-204ENST00000453306 KCTD18Q6PI47 426 aaPredicted RBP13.41□□□□□ -0.26
VCX3B-204ENST00000453306 DRAM2Q6UX65 266 aa13.41□□□□□ -0.26
VCX3B-204ENST00000453306 FAM57BQ71RH2 274 aa13.41□□□□□ -0.26
VCX3B-204ENST00000453306 PRSS35Q8N3Z0 413 aa13.41□□□□□ -0.26
VCX3B-204ENST00000453306 ZNF283Q8N7M2 679 aa13.41□□□□□ -0.26
VCX3B-204ENST00000453306 OR1J1Q8NGS3 322 aa13.41□□□□□ -0.26
VCX3B-204ENST00000453306 SPTSSAQ969W0 71 aa13.41□□□□□ -0.26
VCX3B-204ENST00000453306 PELI1Q96FA3 418 aa13.41□□□□□ -0.26
VCX3B-204ENST00000453306 C4orf36Q96KX1 117 aa13.41□□□□□ -0.26
VCX3B-204ENST00000453306 DOK1Q99704 481 aa13.41□□□□□ -0.26
VCX3B-204ENST00000453306 OR2J1Q9GZK6 312 aa13.41□□□□□ -0.26
VCX3B-204ENST00000453306 BRD7Q9NPI1 651 aa13.41□□□□□ -0.26
VCX3B-204ENST00000453306 G6PC2Q9NQR9 355 aa13.41□□□□□ -0.26
VCX3B-204ENST00000453306 PCDHGB1Q9Y5G3 927 aa13.41□□□□□ -0.26
VCX3B-204ENST00000453306 N6AMT1Q9Y5N5 214 aa13.41□□□□□ -0.26
VCX3B-204ENST00000453306 SIRT4Q9Y6E7 314 aaPredicted RBP13.41□□□□□ -0.26
VCX3B-204ENST00000453306 HIVEP2P31629 2446 aa13.41□□□□□ -0.26
VCX3B-204ENST00000453306 COL6A5A8TX70 2615 aa13.41□□□□□ -0.26
VCX3B-204ENST00000453306 J3QLW9 94 aa13.4□□□□□ -0.26
VCX3B-204ENST00000453306 PHYHO14832 338 aa13.4□□□□□ -0.26
VCX3B-204ENST00000453306 SULT1C4O75897 302 aa13.4□□□□□ -0.26
VCX3B-204ENST00000453306 RPP14O95059 124 aaKnown RBP13.4□□□□□ -0.26
VCX3B-204ENST00000453306 MT-ND2P03891 347 aa13.4□□□□□ -0.26
VCX3B-204ENST00000453306 OR4A8P0C604 315 aa13.4□□□□□ -0.26
VCX3B-204ENST00000453306 ZNF19P17023 458 aa13.4□□□□□ -0.26
VCX3B-204ENST00000453306 DCTDP32321 178 aa13.4□□□□□ -0.26
VCX3B-204ENST00000453306 KIR3DL2P43630 455 aa13.4□□□□□ -0.26
VCX3B-204ENST00000453306 FABP6P51161 128 aa13.4□□□□□ -0.26
VCX3B-204ENST00000453306 CDH15P55291 814 aa13.4□□□□□ -0.26
VCX3B-204ENST00000453306 NANOS3P60323 173 aaKnown RBP13.4□□□□□ -0.26
VCX3B-204ENST00000453306 PSMA6P60900 246 aaKnown RBP13.4□□□□□ -0.26
VCX3B-204ENST00000453306 ACTC1P68032 377 aa13.4□□□□□ -0.26
VCX3B-204ENST00000453306 ACTA1P68133 377 aa13.4□□□□□ -0.26
VCX3B-204ENST00000453306 ZNF92Q03936 586 aa13.4□□□□□ -0.26
VCX3B-204ENST00000453306 MED21Q13503 144 aa13.4□□□□□ -0.26
VCX3B-204ENST00000453306 GLYATL3Q5SZD4 288 aa13.4□□□□□ -0.26
VCX3B-204ENST00000453306 YIPF7Q8N8F6 280 aa13.4□□□□□ -0.26
VCX3B-204ENST00000453306 OR8B12Q8NGG6 310 aa13.4□□□□□ -0.26
VCX3B-204ENST00000453306 OR2AE1Q8NHA4 323 aa13.4□□□□□ -0.26
VCX3B-204ENST00000453306 KLF14Q8TD94 323 aaPredicted RBP13.4□□□□□ -0.26
VCX3B-204ENST00000453306 SNX33Q8WV41 574 aa13.4□□□□□ -0.26
VCX3B-204ENST00000453306 SPRYD4Q8WW59 207 aaPredicted RBP13.4□□□□□ -0.26
VCX3B-204ENST00000453306 LYZL4Q96KX0 146 aa13.4□□□□□ -0.26
VCX3B-204ENST00000453306 DHRS9Q9BPW9 319 aa13.4□□□□□ -0.26
VCX3B-204ENST00000453306 KCNS3Q9BQ31 491 aa13.4□□□□□ -0.26
VCX3B-204ENST00000453306 REPIN1Q9BWE0 567 aaKnown RBP13.4□□□□□ -0.26
VCX3B-204ENST00000453306 MROQ9BYG7 248 aa13.4□□□□□ -0.26
VCX3B-204ENST00000453306 MRPL37Q9BZE1 423 aaKnown RBP13.4□□□□□ -0.26
VCX3B-204ENST00000453306 Q9H521 79 aa13.4□□□□□ -0.26
VCX3B-204ENST00000453306 ZNF442Q9H7R0 627 aa13.4□□□□□ -0.26
VCX3B-204ENST00000453306 PTTG3PQ9NZH4 202 aa13.4□□□□□ -0.26
VCX3B-204ENST00000453306 EIF3KQ9UBQ5 218 aaKnown RBP13.4□□□□□ -0.26
VCX3B-204ENST00000453306 POU2F3Q9UKI9 436 aa13.4□□□□□ -0.26
VCX3B-204ENST00000453306 SLC22A13Q9Y226 551 aa13.4□□□□□ -0.26
VCX3B-204ENST00000453306 TMEM269A0A1B0GVZ9 245 aa13.39□□□□□ -0.27
VCX3B-204ENST00000453306 OVOL3O00110 214 aa13.39□□□□□ -0.27
VCX3B-204ENST00000453306 LILRA1O75019 489 aa13.39□□□□□ -0.27
VCX3B-204ENST00000453306 LCKP06239 509 aa13.39□□□□□ -0.27
VCX3B-204ENST00000453306 ZNF250P15622 560 aa13.39□□□□□ -0.27
VCX3B-204ENST00000453306 HSD11B1P28845 292 aa13.39□□□□□ -0.27
VCX3B-204ENST00000453306 RAD52P43351 418 aa13.39□□□□□ -0.27
VCX3B-204ENST00000453306 SLC6A9P48067 706 aa13.39□□□□□ -0.27
VCX3B-204ENST00000453306 MMP16P51512 607 aa13.39□□□□□ -0.27
VCX3B-204ENST00000453306 GTF2A1P52655 376 aaPredicted RBP13.39□□□□□ -0.27
VCX3B-204ENST00000453306 RIDAP52758 137 aaKnown RBP13.39□□□□□ -0.27
VCX3B-204ENST00000453306 PSG7Q13046 419 aa13.39□□□□□ -0.27
VCX3B-204ENST00000453306 RBM48Q5RL73 367 aaKnown RBP13.39□□□□□ -0.27
VCX3B-204ENST00000453306 HIST2H2ABQ8IUE6 130 aaPredicted RBP13.39□□□□□ -0.27
VCX3B-204ENST00000453306 GTF3AQ92664 365 aaKnown RBP13.39□□□□□ -0.27
VCX3B-204ENST00000453306 APOBEC3DQ96AK3 386 aaPredicted RBP13.39□□□□□ -0.27
VCX3B-204ENST00000453306 CMBLQ96DG6 245 aa13.39□□□□□ -0.27
VCX3B-204ENST00000453306 CDCA4Q9BXL8 241 aa13.39□□□□□ -0.27
VCX3B-204ENST00000453306 BARX1Q9HBU1 254 aaPredicted RBP13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms