RNA–Protein interactions for RNA: ENST00000452182.1

SCN9A-204, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

TSL 1 (best)

Gene SCN9A, Length 1,618 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-204ENST00000452182 TGM4P49221 684 aa9.96□□□□□ -0.82
SCN9A-204ENST00000452182 GBX2P52951 348 aaPredicted RBP9.96□□□□□ -0.82
SCN9A-204ENST00000452182 WNT4P56705 351 aa9.96□□□□□ -0.82
SCN9A-204ENST00000452182 MFGE8Q08431 387 aaPredicted RBP9.96□□□□□ -0.82
SCN9A-204ENST00000452182 ACSM1Q08AH1 577 aa9.96□□□□□ -0.82
SCN9A-204ENST00000452182 MALLQ13021 153 aa9.96□□□□□ -0.82
SCN9A-204ENST00000452182 TBCEQ15813 527 aaPredicted RBP9.96□□□□□ -0.82
SCN9A-204ENST00000452182 SNAI3Q3KNW1 292 aa9.96□□□□□ -0.82
SCN9A-204ENST00000452182 MBNL2Q5VZF2 373 aaKnown RBP9.96□□□□□ -0.82
SCN9A-204ENST00000452182 RGS7BPQ6MZT1 257 aaPredicted RBP9.96□□□□□ -0.82
SCN9A-204ENST00000452182 FBXW12Q6X9E4 464 aa9.96□□□□□ -0.82
SCN9A-204ENST00000452182 CATSPERDQ86XM0 798 aa9.96□□□□□ -0.82
SCN9A-204ENST00000452182 AKAP1Q92667 903 aaKnown RBP eCLIP9.96□□□□□ -0.82
SCN9A-204ENST00000452182 FBXW5Q969U6 566 aa9.96□□□□□ -0.82
SCN9A-204ENST00000452182 DHRS9Q9BPW9 319 aa9.96□□□□□ -0.82
SCN9A-204ENST00000452182 CCDC90BQ9GZT6 254 aa9.96□□□□□ -0.82
SCN9A-204ENST00000452182 PBOV1Q9GZY1 135 aa9.96□□□□□ -0.82
SCN9A-204ENST00000452182 OPA3Q9H6K4 179 aa9.96□□□□□ -0.82
SCN9A-204ENST00000452182 ZNF696Q9H7X3 374 aa9.96□□□□□ -0.82
SCN9A-204ENST00000452182 TRIM36Q9NQ86 728 aa9.96□□□□□ -0.82
SCN9A-204ENST00000452182 ZNF319Q9P2F9 582 aa9.96□□□□□ -0.82
SCN9A-204ENST00000452182 OR52A1Q9UKL2 312 aa9.96□□□□□ -0.82
SCN9A-204ENST00000452182 PTPN13Q12923 2485 aa9.96□□□□□ -0.82
SCN9A-204ENST00000452182 CELSR2Q9HCU4 2923 aa9.95□□□□□ -0.82
SCN9A-204ENST00000452182 IGLV3-9A0A075B6K5 115 aa9.95□□□□□ -0.82
SCN9A-204ENST00000452182 IGLV3-1P01715 115 aa9.95□□□□□ -0.82
SCN9A-204ENST00000452182 LCKP06239 509 aa9.95□□□□□ -0.82
SCN9A-204ENST00000452182 RAC2P15153 192 aa9.95□□□□□ -0.82
SCN9A-204ENST00000452182 ANOS1P23352 680 aa9.95□□□□□ -0.82
SCN9A-204ENST00000452182 CFL1P23528 166 aaKnown RBP9.95□□□□□ -0.82
SCN9A-204ENST00000452182 APOBEC3AP31941 199 aaPredicted RBP9.95□□□□□ -0.82
SCN9A-204ENST00000452182 EVX1P49640 407 aa9.95□□□□□ -0.82
SCN9A-204ENST00000452182 BDH1Q02338 343 aa9.95□□□□□ -0.82
SCN9A-204ENST00000452182 ADIPOQQ15848 244 aa9.95□□□□□ -0.82
SCN9A-204ENST00000452182 ZNF718Q3SXZ3 478 aa9.95□□□□□ -0.82
SCN9A-204ENST00000452182 BCL2L15Q5TBC7 163 aa9.95□□□□□ -0.82
SCN9A-204ENST00000452182 RPL22L1Q6P5R6 122 aaKnown RBP9.95□□□□□ -0.82
SCN9A-204ENST00000452182 ZNF773Q6PK81 442 aa9.95□□□□□ -0.82
SCN9A-204ENST00000452182 FAM57BQ71RH2 274 aa9.95□□□□□ -0.82
SCN9A-204ENST00000452182 ELMOD2Q8IZ81 293 aa9.95□□□□□ -0.82
SCN9A-204ENST00000452182 ZNF611Q8N823 705 aa9.95□□□□□ -0.82
SCN9A-204ENST00000452182 OR8B12Q8NGG6 310 aa9.95□□□□□ -0.82
SCN9A-204ENST00000452182 OR2G2Q8NGZ5 317 aa9.95□□□□□ -0.82
SCN9A-204ENST00000452182 SLC25A40Q8TBP6 338 aa9.95□□□□□ -0.82
SCN9A-204ENST00000452182 KLF14Q8TD94 323 aaPredicted RBP9.95□□□□□ -0.82
SCN9A-204ENST00000452182 GATAD2BQ8WXI9 593 aa9.95□□□□□ -0.82
SCN9A-204ENST00000452182 NEUROG1Q92886 237 aa9.95□□□□□ -0.82
SCN9A-204ENST00000452182 MRPL24Q96A35 216 aaKnown RBP9.95□□□□□ -0.82
SCN9A-204ENST00000452182 SGK3Q96BR1 496 aa9.95□□□□□ -0.82
SCN9A-204ENST00000452182 PGAM5Q96HS1 289 aa9.95□□□□□ -0.82
SCN9A-204ENST00000452182 OR2J1Q9GZK6 312 aa9.95□□□□□ -0.82
SCN9A-204ENST00000452182 OR51B6Q9H340 312 aa9.95□□□□□ -0.82
SCN9A-204ENST00000452182 PLEKHF2Q9H8W4 249 aa9.95□□□□□ -0.82
SCN9A-204ENST00000452182 LSM2Q9Y333 95 aaKnown RBP9.95□□□□□ -0.82
SCN9A-204ENST00000452182 CMAHPQ9Y471 501 aa9.95□□□□□ -0.82
SCN9A-204ENST00000452182 ABCA4P78363 2273 aa9.95□□□□□ -0.82
SCN9A-204ENST00000452182 PLCE1Q9P212 2302 aa9.94□□□□□ -0.82
SCN9A-204ENST00000452182 C5orf63A6NC05 138 aa9.94□□□□□ -0.82
SCN9A-204ENST00000452182 ATE1O95260 518 aa9.94□□□□□ -0.82
SCN9A-204ENST00000452182 TTRP02766 147 aa9.94□□□□□ -0.82
SCN9A-204ENST00000452182 ISG15P05161 165 aa9.94□□□□□ -0.82
SCN9A-204ENST00000452182 RPSAP08865 295 aaKnown RBP9.94□□□□□ -0.82
SCN9A-204ENST00000452182 TTKP33981 857 aa9.94□□□□□ -0.82
SCN9A-204ENST00000452182 PSMB10P40306 273 aa9.94□□□□□ -0.82
SCN9A-204ENST00000452182 TAS2R43P59537 309 aa9.94□□□□□ -0.82
SCN9A-204ENST00000452182 NANOS3P60323 173 aaKnown RBP9.94□□□□□ -0.82
SCN9A-204ENST00000452182 ERVS71-1P61550 626 aa9.94□□□□□ -0.82
SCN9A-204ENST00000452182 ALKBH1Q13686 389 aaKnown RBP9.94□□□□□ -0.82
SCN9A-204ENST00000452182 GK2Q14410 553 aaPredicted RBP9.94□□□□□ -0.82
SCN9A-204ENST00000452182 SPHARQ15513 63 aa9.94□□□□□ -0.82
SCN9A-204ENST00000452182 EFNB3Q15768 340 aa9.94□□□□□ -0.82
SCN9A-204ENST00000452182 WDR38Q5JTN6 314 aa9.94□□□□□ -0.82
SCN9A-204ENST00000452182 GLYATL3Q5SZD4 288 aa9.94□□□□□ -0.82
SCN9A-204ENST00000452182 KLBQ86Z14 1044 aa9.94□□□□□ -0.82
SCN9A-204ENST00000452182 SPARTQ8N0X7 666 aa9.94□□□□□ -0.82
SCN9A-204ENST00000452182 PRSS35Q8N3Z0 413 aa9.94□□□□□ -0.82
SCN9A-204ENST00000452182 SVOPQ8N4V2 548 aa9.94□□□□□ -0.82
SCN9A-204ENST00000452182 SYNPRQ8TBG9 265 aa9.94□□□□□ -0.82
SCN9A-204ENST00000452182 RPS4Y2Q8TD47 263 aa9.94□□□□□ -0.82
SCN9A-204ENST00000452182 HAVCR1Q96D42 359 aa9.94□□□□□ -0.82
SCN9A-204ENST00000452182 POFUT1Q9H488 388 aa9.94□□□□□ -0.82
SCN9A-204ENST00000452182 BRD7Q9NPI1 651 aa9.94□□□□□ -0.82
SCN9A-204ENST00000452182 ACOT13Q9NPJ3 140 aa9.94□□□□□ -0.82
SCN9A-204ENST00000452182 FAIMQ9NVQ4 179 aa9.94□□□□□ -0.82
SCN9A-204ENST00000452182 FRRS1LQ9P0K9 344 aa9.94□□□□□ -0.82
SCN9A-204ENST00000452182 E9PI62 339 aa9.93□□□□□ -0.82
SCN9A-204ENST00000452182 OGG1O15527 345 aa9.93□□□□□ -0.82
SCN9A-204ENST00000452182 TBX1O43435 398 aa9.93□□□□□ -0.82
SCN9A-204ENST00000452182 LALBAP00709 142 aa9.93□□□□□ -0.82
SCN9A-204ENST00000452182 IGHV3-13P01766 116 aa9.93□□□□□ -0.82
SCN9A-204ENST00000452182 OR4A8P0C604 315 aa9.93□□□□□ -0.82
SCN9A-204ENST00000452182 DANCRP0C864 163 aa9.93□□□□□ -0.82
SCN9A-204ENST00000452182 UBCP0CG48 685 aaKnown RBP9.93□□□□□ -0.82
SCN9A-204ENST00000452182 KITLGP21583 273 aa9.93□□□□□ -0.82
SCN9A-204ENST00000452182 GCH1P30793 250 aa9.93□□□□□ -0.82
SCN9A-204ENST00000452182 SERPINF1P36955 418 aa9.93□□□□□ -0.82
SCN9A-204ENST00000452182 FABP6P51161 128 aa9.93□□□□□ -0.82
SCN9A-204ENST00000452182 SELENOVP59797 346 aa9.93□□□□□ -0.82
SCN9A-204ENST00000452182 ZNF92Q03936 586 aa9.93□□□□□ -0.82
SCN9A-204ENST00000452182 EMX1Q04741 257 aaPredicted RBP9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms