RNA–Protein interactions for RNA: ENST00000451053.2

VPS33A-202, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 3 BASIC

Gene VPS33A, Length 1,154 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-202ENST00000451053 GLRXP35754 106 aa11.21□□□□□ -0.61
VPS33A-202ENST00000451053 RAD52P43351 418 aa11.21□□□□□ -0.61
VPS33A-202ENST00000451053 SLC6A9P48067 706 aa11.21□□□□□ -0.61
VPS33A-202ENST00000451053 CX3CR1P49238 355 aa11.21□□□□□ -0.61
VPS33A-202ENST00000451053 FABP6P51161 128 aa11.21□□□□□ -0.61
VPS33A-202ENST00000451053 TPTEP56180 551 aa11.21□□□□□ -0.61
VPS33A-202ENST00000451053 PPP1CBP62140 327 aa11.21□□□□□ -0.61
VPS33A-202ENST00000451053 TPBGQ13641 420 aa11.21□□□□□ -0.61
VPS33A-202ENST00000451053 TRAM1Q15629 374 aa11.21□□□□□ -0.61
VPS33A-202ENST00000451053 ADIPOQQ15848 244 aa11.21□□□□□ -0.61
VPS33A-202ENST00000451053 TSTQ16762 297 aaKnown RBP11.21□□□□□ -0.61
VPS33A-202ENST00000451053 TIMM50Q3ZCQ8 353 aa11.21□□□□□ -0.61
VPS33A-202ENST00000451053 SPATA46Q5T0L3 261 aa11.21□□□□□ -0.61
VPS33A-202ENST00000451053 LIPNQ5VXI9 398 aa11.21□□□□□ -0.61
VPS33A-202ENST00000451053 FDX2Q6P4F2 183 aa11.21□□□□□ -0.61
VPS33A-202ENST00000451053 ARL9Q6T311 187 aa11.21□□□□□ -0.61
VPS33A-202ENST00000451053 SATL1Q86VE3 508 aa11.21□□□□□ -0.61
VPS33A-202ENST00000451053 ZNF283Q8N7M2 679 aa11.21□□□□□ -0.61
VPS33A-202ENST00000451053 ZNF611Q8N823 705 aa11.21□□□□□ -0.61
VPS33A-202ENST00000451053 OR1J1Q8NGS3 322 aa11.21□□□□□ -0.61
VPS33A-202ENST00000451053 C1QTNF5Q9BXJ0 243 aa11.21□□□□□ -0.61
VPS33A-202ENST00000451053 BCL2L14Q9BZR8 327 aa11.21□□□□□ -0.61
VPS33A-202ENST00000451053 ZNF442Q9H7R0 627 aa11.21□□□□□ -0.61
VPS33A-202ENST00000451053 MOB1AQ9H8S9 216 aa11.21□□□□□ -0.61
VPS33A-202ENST00000451053 STARD10Q9Y365 291 aa11.21□□□□□ -0.61
VPS33A-202ENST00000451053 TRBV2A0A0J9YWF9 115 aa11.2□□□□□ -0.62
VPS33A-202ENST00000451053 ACOD1A6NK06 481 aa11.2□□□□□ -0.62
VPS33A-202ENST00000451053 OGG1O15527 345 aa11.2□□□□□ -0.62
VPS33A-202ENST00000451053 RPP14O95059 124 aaKnown RBP11.2□□□□□ -0.62
VPS33A-202ENST00000451053 LCATP04180 440 aa11.2□□□□□ -0.62
VPS33A-202ENST00000451053 CD1AP06126 327 aa11.2□□□□□ -0.62
VPS33A-202ENST00000451053 SOD3P08294 240 aa11.2□□□□□ -0.62
VPS33A-202ENST00000451053 OR4A8P0C604 315 aa11.2□□□□□ -0.62
VPS33A-202ENST00000451053 DANCRP0C864 163 aa11.2□□□□□ -0.62
VPS33A-202ENST00000451053 CD36P16671 472 aa11.2□□□□□ -0.62
VPS33A-202ENST00000451053 PSMA1P25786 263 aaKnown RBP11.2□□□□□ -0.62
VPS33A-202ENST00000451053 APOBEC3AP31941 199 aaPredicted RBP11.2□□□□□ -0.62
VPS33A-202ENST00000451053 RGS6P49758 472 aa11.2□□□□□ -0.62
VPS33A-202ENST00000451053 PSMA6P60900 246 aaKnown RBP11.2□□□□□ -0.62
VPS33A-202ENST00000451053 RPS23P62266 143 aaKnown RBP11.2□□□□□ -0.62
VPS33A-202ENST00000451053 CDK5R1Q15078 307 aa11.2□□□□□ -0.62
VPS33A-202ENST00000451053 RGS7BPQ6MZT1 257 aaPredicted RBP11.2□□□□□ -0.62
VPS33A-202ENST00000451053 COLCA1Q6ZS62 124 aa11.2□□□□□ -0.62
VPS33A-202ENST00000451053 SLC25A40Q8TBP6 338 aa11.2□□□□□ -0.62
VPS33A-202ENST00000451053 DOK1Q99704 481 aa11.2□□□□□ -0.62
VPS33A-202ENST00000451053 FAM192AQ9GZU8 254 aa11.2□□□□□ -0.62
VPS33A-202ENST00000451053 SP140LQ9H930 580 aa11.2□□□□□ -0.62
VPS33A-202ENST00000451053 TBCCD1Q9NVR7 557 aa11.2□□□□□ -0.62
VPS33A-202ENST00000451053 NDUFB11Q9NX14 153 aa11.2□□□□□ -0.62
VPS33A-202ENST00000451053 FZR1Q9UM11 496 aa11.2□□□□□ -0.62
VPS33A-202ENST00000451053 R4GMQ9 66 aa11.2□□□□□ -0.62
VPS33A-202ENST00000451053 ABCA4P78363 2273 aa11.2□□□□□ -0.62
VPS33A-202ENST00000451053 RTTNQ86VV8 2226 aa11.19□□□□□ -0.62
VPS33A-202ENST00000451053 TMEM269A0A1B0GVZ9 245 aa11.19□□□□□ -0.62
VPS33A-202ENST00000451053 LOC110117498-PIK3R3F6TDL0 507 aa11.19□□□□□ -0.62
VPS33A-202ENST00000451053 PLPP2O43688 288 aa11.19□□□□□ -0.62
VPS33A-202ENST00000451053 LALBAP00709 142 aa11.19□□□□□ -0.62
VPS33A-202ENST00000451053 CELP19835 753 aa11.19□□□□□ -0.62
VPS33A-202ENST00000451053 GABRA5P31644 462 aa11.19□□□□□ -0.62
VPS33A-202ENST00000451053 LIPAP38571 399 aa11.19□□□□□ -0.62
VPS33A-202ENST00000451053 MPV17P39210 176 aa11.19□□□□□ -0.62
VPS33A-202ENST00000451053 MMP16P51512 607 aa11.19□□□□□ -0.62
VPS33A-202ENST00000451053 CCR9P51686 369 aa11.19□□□□□ -0.62
VPS33A-202ENST00000451053 ZNF121P58317 390 aaPredicted RBP11.19□□□□□ -0.62
VPS33A-202ENST00000451053 ALKBH1Q13686 389 aaKnown RBP11.19□□□□□ -0.62
VPS33A-202ENST00000451053 SNAI3Q3KNW1 292 aa11.19□□□□□ -0.62
VPS33A-202ENST00000451053 LIPKQ5VXJ0 399 aa11.19□□□□□ -0.62
VPS33A-202ENST00000451053 DMKNQ6E0U4 476 aaPredicted RBP11.19□□□□□ -0.62
VPS33A-202ENST00000451053 DRAM2Q6UX65 266 aa11.19□□□□□ -0.62
VPS33A-202ENST00000451053 C20orf204Q6ZNR8 217 aa11.19□□□□□ -0.62
VPS33A-202ENST00000451053 PRSS45Q7RTY3 260 aa11.19□□□□□ -0.62
VPS33A-202ENST00000451053 LRP11Q86VZ4 500 aa11.19□□□□□ -0.62
VPS33A-202ENST00000451053 PHC2Q8IXK0 858 aa11.19□□□□□ -0.62
VPS33A-202ENST00000451053 FBXL14Q8N1E6 418 aa11.19□□□□□ -0.62
VPS33A-202ENST00000451053 MS4A15Q8N5U1 240 aa11.19□□□□□ -0.62
VPS33A-202ENST00000451053 MRPL24Q96A35 216 aaKnown RBP11.19□□□□□ -0.62
VPS33A-202ENST00000451053 APOBEC3DQ96AK3 386 aaPredicted RBP11.19□□□□□ -0.62
VPS33A-202ENST00000451053 TMIGD2Q96BF3 282 aa11.19□□□□□ -0.62
VPS33A-202ENST00000451053 SMIM19Q96E16 107 aa11.19□□□□□ -0.62
VPS33A-202ENST00000451053 YIPF6Q96EC8 236 aa11.19□□□□□ -0.62
VPS33A-202ENST00000451053 MARS2Q96GW9 593 aaKnown RBP11.19□□□□□ -0.62
VPS33A-202ENST00000451053 LURAP1Q96LR2 239 aa11.19□□□□□ -0.62
VPS33A-202ENST00000451053 BCL7BQ9BQE9 202 aa11.19□□□□□ -0.62
VPS33A-202ENST00000451053 SYT3Q9BQG1 590 aa11.19□□□□□ -0.62
VPS33A-202ENST00000451053 MRPL37Q9BZE1 423 aaKnown RBP11.19□□□□□ -0.62
VPS33A-202ENST00000451053 OR2J1Q9GZK6 312 aa11.19□□□□□ -0.62
VPS33A-202ENST00000451053 COMMD4Q9H0A8 199 aa11.19□□□□□ -0.62
VPS33A-202ENST00000451053 BRD7Q9NPI1 651 aa11.19□□□□□ -0.62
VPS33A-202ENST00000451053 PTTG3PQ9NZH4 202 aa11.19□□□□□ -0.62
VPS33A-202ENST00000451053 MYEF2Q9P2K5 600 aaKnown RBP11.19□□□□□ -0.62
VPS33A-202ENST00000451053 ST6GALNAC2Q9UJ37 374 aa11.19□□□□□ -0.62
VPS33A-202ENST00000451053 CMAHPQ9Y471 501 aa11.19□□□□□ -0.62
VPS33A-202ENST00000451053 N6AMT1Q9Y5N5 214 aa11.19□□□□□ -0.62
VPS33A-202ENST00000451053 DPPA5A6NC42 116 aa11.18□□□□□ -0.62
VPS33A-202ENST00000451053 TMEM212A6NML5 194 aa11.18□□□□□ -0.62
VPS33A-202ENST00000451053 E9PI62 339 aa11.18□□□□□ -0.62
VPS33A-202ENST00000451053 J3QW42 95 aa11.18□□□□□ -0.62
VPS33A-202ENST00000451053 SRSF10O75494 262 aaKnown RBP11.18□□□□□ -0.62
VPS33A-202ENST00000451053 CD8AP01732 235 aa11.18□□□□□ -0.62
VPS33A-202ENST00000451053 ANXA2P07355 339 aaKnown RBP11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms