RNA–Protein interactions for RNA: ENST00000449954.1

LINC01961-201, Transcript of long intergenic non-protein coding RNA 1961, humanhuman

TSL 5 BASIC

Gene LINC01961, Length 745 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01961-201ENST00000449954 PAX6P26367 422 aa6.25□□□□□ -1.41
LINC01961-201ENST00000449954 LAP3P28838 519 aa6.25□□□□□ -1.41
LINC01961-201ENST00000449954 DAP3P51398 398 aaKnown RBP6.25□□□□□ -1.41
LINC01961-201ENST00000449954 INSL3P51460 131 aa6.25□□□□□ -1.41
LINC01961-201ENST00000449954 PLTPP55058 493 aa6.25□□□□□ -1.41
LINC01961-201ENST00000449954 LGALS4P56470 323 aa6.25□□□□□ -1.41
LINC01961-201ENST00000449954 CLDN8P56748 225 aa6.25□□□□□ -1.41
LINC01961-201ENST00000449954 DNAJB13P59910 316 aa6.25□□□□□ -1.41
LINC01961-201ENST00000449954 NCALDP61601 193 aa6.25□□□□□ -1.41
LINC01961-201ENST00000449954 HOXA4Q00056 320 aaPredicted RBP6.25□□□□□ -1.41
LINC01961-201ENST00000449954 HOXC5Q00444 222 aa6.25□□□□□ -1.41
LINC01961-201ENST00000449954 SCRN3Q0VDG4 424 aa6.25□□□□□ -1.41
LINC01961-201ENST00000449954 MICBQ29980 383 aa6.25□□□□□ -1.41
LINC01961-201ENST00000449954 PLA1AQ53H76 456 aa6.25□□□□□ -1.41
LINC01961-201ENST00000449954 LRRC10Q5BKY1 277 aa6.25□□□□□ -1.41
LINC01961-201ENST00000449954 BEND6Q5SZJ8 279 aaPredicted RBP6.25□□□□□ -1.41
LINC01961-201ENST00000449954 ZYG11AQ6WRX3 759 aa6.25□□□□□ -1.41
LINC01961-201ENST00000449954 OR2W3Q7Z3T1 314 aa6.25□□□□□ -1.41
LINC01961-201ENST00000449954 ARMC8Q8IUR7 673 aa6.25□□□□□ -1.41
LINC01961-201ENST00000449954 OSR2Q8N2R0 312 aa6.25□□□□□ -1.41
LINC01961-201ENST00000449954 SYT8Q8NBV8 401 aa6.25□□□□□ -1.41
LINC01961-201ENST00000449954 BVESQ8NE79 360 aa6.25□□□□□ -1.41
LINC01961-201ENST00000449954 AENQ8WTP8 325 aaKnown RBP6.25□□□□□ -1.41
LINC01961-201ENST00000449954 TWIST2Q8WVJ9 160 aa6.25□□□□□ -1.41
LINC01961-201ENST00000449954 ACOT11Q8WXI4 607 aaPredicted RBP6.25□□□□□ -1.41
LINC01961-201ENST00000449954 AKR1E2Q96JD6 320 aa6.25□□□□□ -1.41
LINC01961-201ENST00000449954 SPATA25Q9BR10 227 aa6.25□□□□□ -1.41
LINC01961-201ENST00000449954 ZFP57Q9NU63 452 aa6.25□□□□□ -1.41
LINC01961-201ENST00000449954 TAS2R5Q9NYW4 299 aa6.25□□□□□ -1.41
LINC01961-201ENST00000449954 SCOCQ9UIL1 159 aa6.25□□□□□ -1.41
LINC01961-201ENST00000449954 LYVE1Q9Y5Y7 322 aa6.25□□□□□ -1.41
LINC01961-201ENST00000449954 CAPN7Q9Y6W3 813 aa6.25□□□□□ -1.41
LINC01961-201ENST00000449954 SORL1Q92673 2214 aa6.24□□□□□ -1.41
LINC01961-201ENST00000449954 IGLV1-36A0A0B4J1U3 117 aa6.24□□□□□ -1.41
LINC01961-201ENST00000449954 A0A1W2PQ09 198 aa6.24□□□□□ -1.41
LINC01961-201ENST00000449954 A0A1W2PRG6 482 aa6.24□□□□□ -1.41
LINC01961-201ENST00000449954 H0YAE9 185 aa6.24□□□□□ -1.41
LINC01961-201ENST00000449954 POLR3GO15318 223 aaPredicted RBP6.24□□□□□ -1.41
LINC01961-201ENST00000449954 DOK2O60496 412 aa6.24□□□□□ -1.41
LINC01961-201ENST00000449954 TRMUO75648 421 aaKnown RBP6.24□□□□□ -1.41
LINC01961-201ENST00000449954 CPSF4O95639 269 aaKnown RBP6.24□□□□□ -1.41
LINC01961-201ENST00000449954 BCHEP06276 602 aa6.24□□□□□ -1.41
LINC01961-201ENST00000449954 SNRPAP09012 282 aaKnown RBP6.24□□□□□ -1.41
LINC01961-201ENST00000449954 ACADSP16219 412 aa6.24□□□□□ -1.41
LINC01961-201ENST00000449954 HTR2AP28223 471 aa6.24□□□□□ -1.41
LINC01961-201ENST00000449954 DYNLT3P51808 116 aa6.24□□□□□ -1.41
LINC01961-201ENST00000449954 RAB25P57735 213 aa6.24□□□□□ -1.41
LINC01961-201ENST00000449954 MAD2L1Q13257 205 aaPredicted RBP6.24□□□□□ -1.41
LINC01961-201ENST00000449954 C6orf136Q5SQH8 315 aa6.24□□□□□ -1.41
LINC01961-201ENST00000449954 FAM27D1Q5T7N8 215 aa6.24□□□□□ -1.41
LINC01961-201ENST00000449954 C16orf82Q7Z2V1 217 aa6.24□□□□□ -1.41
LINC01961-201ENST00000449954 CNPY4Q8N129 248 aa6.24□□□□□ -1.41
LINC01961-201ENST00000449954 C10orf111Q8N326 155 aa6.24□□□□□ -1.41
LINC01961-201ENST00000449954 FGFRL1Q8N441 504 aa6.24□□□□□ -1.41
LINC01961-201ENST00000449954 GCSAMQ8N6F7 178 aa6.24□□□□□ -1.41
LINC01961-201ENST00000449954 KLHL30-AS1Q8NEE0 82 aa6.24□□□□□ -1.41
LINC01961-201ENST00000449954 H1FXQ92522 213 aaKnown RBP6.24□□□□□ -1.41
LINC01961-201ENST00000449954 HCAR1Q9BXC0 346 aa6.24□□□□□ -1.41
LINC01961-201ENST00000449954 FUT8Q9BYC5 575 aa6.24□□□□□ -1.41
LINC01961-201ENST00000449954 SLC22A4Q9H015 551 aa6.24□□□□□ -1.41
LINC01961-201ENST00000449954 HEXA-AS1Q9H8Q6 139 aa6.24□□□□□ -1.41
LINC01961-201ENST00000449954 SLCO1B3Q9NPD5 702 aa6.24□□□□□ -1.41
LINC01961-201ENST00000449954 PTTG3PQ9NZH4 202 aa6.24□□□□□ -1.41
LINC01961-201ENST00000449954 SLC13A4Q9UKG4 626 aa6.24□□□□□ -1.41
LINC01961-201ENST00000449954 A0A0B4J2E0 115 aa6.23□□□□□ -1.41
LINC01961-201ENST00000449954 A0A0G2JPF8 293 aa6.23□□□□□ -1.41
LINC01961-201ENST00000449954 A0A1B0GX12 115 aa6.23□□□□□ -1.41
LINC01961-201ENST00000449954 FAM90A8PA6NJQ4 464 aa6.23□□□□□ -1.41
LINC01961-201ENST00000449954 HNRNPCL2B2RXH8 293 aa6.23□□□□□ -1.41
LINC01961-201ENST00000449954 HNRNPCL3B7ZW38 293 aa6.23□□□□□ -1.41
LINC01961-201ENST00000449954 PRR23D1E9PI22 279 aaPredicted RBP6.23□□□□□ -1.41
LINC01961-201ENST00000449954 G3V2L1 256 aa6.23□□□□□ -1.41
LINC01961-201ENST00000449954 CCL24O00175 119 aa6.23□□□□□ -1.41
LINC01961-201ENST00000449954 SGCEO43556 437 aa6.23□□□□□ -1.41
LINC01961-201ENST00000449954 HNRNPCL1O60812 293 aaKnown RBP6.23□□□□□ -1.41
LINC01961-201ENST00000449954 PRR23D2P0DMB1 279 aaPredicted RBP6.23□□□□□ -1.41
LINC01961-201ENST00000449954 HNRNPCL4P0DMR1 293 aa6.23□□□□□ -1.41
LINC01961-201ENST00000449954 MSR1P21757 451 aa6.23□□□□□ -1.41
LINC01961-201ENST00000449954 GGT2P36268 569 aa6.23□□□□□ -1.41
LINC01961-201ENST00000449954 CD47Q08722 323 aa6.23□□□□□ -1.41
LINC01961-201ENST00000449954 ENDOGQ14249 297 aaKnown RBP6.23□□□□□ -1.41
LINC01961-201ENST00000449954 CASP8Q14790 479 aa6.23□□□□□ -1.41
LINC01961-201ENST00000449954 MAPK11Q15759 364 aa6.23□□□□□ -1.41
LINC01961-201ENST00000449954 WDR38Q5JTN6 314 aa6.23□□□□□ -1.41
LINC01961-201ENST00000449954 HHATQ5VTY9 493 aa6.23□□□□□ -1.41
LINC01961-201ENST00000449954 C1orf94Q6P1W5 598 aa6.23□□□□□ -1.41
LINC01961-201ENST00000449954 C10orf99Q6UWK7 81 aa6.23□□□□□ -1.41
LINC01961-201ENST00000449954 TIFABQ6ZNK6 161 aa6.23□□□□□ -1.41
LINC01961-201ENST00000449954 SLC30A8Q8IWU4 369 aa6.23□□□□□ -1.41
LINC01961-201ENST00000449954 FAM216BQ8N7L0 139 aa6.23□□□□□ -1.41
LINC01961-201ENST00000449954 FNDC8Q8TC99 324 aa6.23□□□□□ -1.41
LINC01961-201ENST00000449954 ASB10Q8WXI3 467 aa6.23□□□□□ -1.41
LINC01961-201ENST00000449954 APOBEC3DQ96AK3 386 aaPredicted RBP6.23□□□□□ -1.41
LINC01961-201ENST00000449954 C12orf43Q96C57 262 aaKnown RBP6.23□□□□□ -1.41
LINC01961-201ENST00000449954 NMD3Q96D46 503 aaKnown RBP6.23□□□□□ -1.41
LINC01961-201ENST00000449954 CCL13Q99616 98 aa6.23□□□□□ -1.41
LINC01961-201ENST00000449954 GIMAP2Q9UG22 337 aa6.23□□□□□ -1.41
LINC01961-201ENST00000449954 ATPIF1Q9UII2 106 aa6.23□□□□□ -1.41
LINC01961-201ENST00000449954 ZNF229Q9UJW7 825 aa6.23□□□□□ -1.41
LINC01961-201ENST00000449954 IGKV1D-43A0A0B4J1Z2 117 aa6.22□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms