RNA–Protein interactions for RNA: ENST00000448539.1

GTF3C3-206, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 3

Gene GTF3C3, Length 796 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-206ENST00000448539 NKIRAS2Q9NYR9 191 aa11.96□□□□□ -0.49
GTF3C3-206ENST00000448539 METRNQ9UJH8 293 aa11.96□□□□□ -0.49
GTF3C3-206ENST00000448539 COPS3Q9UNS2 423 aa11.96□□□□□ -0.49
GTF3C3-206ENST00000448539 LRP12Q9Y561 859 aa11.96□□□□□ -0.49
GTF3C3-206ENST00000448539 ARFGEF3Q5TH69 2177 aa11.96□□□□□ -0.5
GTF3C3-206ENST00000448539 SETD2Q9BYW2 2564 aaPredicted RBP11.95□□□□□ -0.5
GTF3C3-206ENST00000448539 GGT3PA6NGU5 568 aa11.95□□□□□ -0.5
GTF3C3-206ENST00000448539 ZSCAN5BA6NJL1 495 aa11.95□□□□□ -0.5
GTF3C3-206ENST00000448539 NDUFS8O00217 210 aa11.95□□□□□ -0.5
GTF3C3-206ENST00000448539 PSMD9O00233 223 aa11.95□□□□□ -0.5
GTF3C3-206ENST00000448539 SMAD7O15105 426 aaKnown RBP11.95□□□□□ -0.5
GTF3C3-206ENST00000448539 IGHV1-46P01743 117 aa11.95□□□□□ -0.5
GTF3C3-206ENST00000448539 HPXP02790 462 aa11.95□□□□□ -0.5
GTF3C3-206ENST00000448539 OR2T7P0C7T2 308 aa11.95□□□□□ -0.5
GTF3C3-206ENST00000448539 SLC25A16P16260 332 aa11.95□□□□□ -0.5
GTF3C3-206ENST00000448539 CFL1P23528 166 aaKnown RBP11.95□□□□□ -0.5
GTF3C3-206ENST00000448539 RIDAP52758 137 aaKnown RBP11.95□□□□□ -0.5
GTF3C3-206ENST00000448539 IL5RAQ01344 420 aa11.95□□□□□ -0.5
GTF3C3-206ENST00000448539 TMEM255AQ5JRV8 349 aa11.95□□□□□ -0.5
GTF3C3-206ENST00000448539 FAM209AQ5JX71 171 aa11.95□□□□□ -0.5
GTF3C3-206ENST00000448539 GLYATL3Q5SZD4 288 aa11.95□□□□□ -0.5
GTF3C3-206ENST00000448539 ZNF322Q6U7Q0 402 aaPredicted RBP11.95□□□□□ -0.5
GTF3C3-206ENST00000448539 ENTHD1Q8IYW4 607 aa11.95□□□□□ -0.5
GTF3C3-206ENST00000448539 ZNF679Q8IYX0 411 aa11.95□□□□□ -0.5
GTF3C3-206ENST00000448539 ZNF786Q8N393 782 aa11.95□□□□□ -0.5
GTF3C3-206ENST00000448539 ZNF540Q8NDQ6 660 aa11.95□□□□□ -0.5
GTF3C3-206ENST00000448539 BHLHE23Q8NDY6 225 aa11.95□□□□□ -0.5
GTF3C3-206ENST00000448539 OR8G5Q8NG78 346 aa11.95□□□□□ -0.5
GTF3C3-206ENST00000448539 OR2Z1Q8NG97 314 aa11.95□□□□□ -0.5
GTF3C3-206ENST00000448539 OR10H4Q8NGA5 316 aa11.95□□□□□ -0.5
GTF3C3-206ENST00000448539 OR2T27Q8NH04 317 aa11.95□□□□□ -0.5
GTF3C3-206ENST00000448539 OR2AE1Q8NHA4 323 aa11.95□□□□□ -0.5
GTF3C3-206ENST00000448539 C10orf105Q8TEF2 133 aa11.95□□□□□ -0.5
GTF3C3-206ENST00000448539 RDH5Q92781 318 aa11.95□□□□□ -0.5
GTF3C3-206ENST00000448539 RNFT2Q96EX2 444 aa11.95□□□□□ -0.5
GTF3C3-206ENST00000448539 C18orf12Q96KH6 178 aa11.95□□□□□ -0.5
GTF3C3-206ENST00000448539 OR8B4Q96RC9 309 aa11.95□□□□□ -0.5
GTF3C3-206ENST00000448539 TBX5Q99593 518 aa11.95□□□□□ -0.5
GTF3C3-206ENST00000448539 TTTY10Q9BZA0 68 aa11.95□□□□□ -0.5
GTF3C3-206ENST00000448539 SAP30LQ9HAJ7 183 aa11.95□□□□□ -0.5
GTF3C3-206ENST00000448539 TMEM100Q9NV29 134 aa11.95□□□□□ -0.5
GTF3C3-206ENST00000448539 NKX1-2Q9UD57 310 aaPredicted RBP11.95□□□□□ -0.5
GTF3C3-206ENST00000448539 C2CD3Q4AC94 2353 aa11.94□□□□□ -0.5
GTF3C3-206ENST00000448539 IGHV4-30-2A0A087WSY4 118 aa11.94□□□□□ -0.5
GTF3C3-206ENST00000448539 IQCF6A8MYZ5 107 aa11.94□□□□□ -0.5
GTF3C3-206ENST00000448539 RNF223E7ERA6 249 aa11.94□□□□□ -0.5
GTF3C3-206ENST00000448539 DLGAP1O14490 977 aa11.94□□□□□ -0.5
GTF3C3-206ENST00000448539 APOL3O95236 402 aa11.94□□□□□ -0.5
GTF3C3-206ENST00000448539 FOSL1P15407 271 aa11.94□□□□□ -0.5
GTF3C3-206ENST00000448539 PSMA6P60900 246 aaKnown RBP11.94□□□□□ -0.5
GTF3C3-206ENST00000448539 MRPS11P82912 194 aaKnown RBP11.94□□□□□ -0.5
GTF3C3-206ENST00000448539 TNFAIP6P98066 277 aaPredicted RBP11.94□□□□□ -0.5
GTF3C3-206ENST00000448539 ROM1Q03395 351 aa11.94□□□□□ -0.5
GTF3C3-206ENST00000448539 ZNF92Q03936 586 aa11.94□□□□□ -0.5
GTF3C3-206ENST00000448539 EGR3Q06889 387 aa11.94□□□□□ -0.5
GTF3C3-206ENST00000448539 CDK5R2Q13319 367 aa11.94□□□□□ -0.5
GTF3C3-206ENST00000448539 GFOD2Q3B7J2 385 aa11.94□□□□□ -0.5
GTF3C3-206ENST00000448539 ZNF829Q3KNS6 432 aaPredicted RBP11.94□□□□□ -0.5
GTF3C3-206ENST00000448539 DNM1P46Q6ZS02 220 aa11.94□□□□□ -0.5
GTF3C3-206ENST00000448539 SETD9Q8NE22 299 aa11.94□□□□□ -0.5
GTF3C3-206ENST00000448539 OR13G1Q8NGZ3 307 aa11.94□□□□□ -0.5
GTF3C3-206ENST00000448539 RHOXF1Q8NHV9 184 aa11.94□□□□□ -0.5
GTF3C3-206ENST00000448539 ELMOD3Q96FG2 381 aa11.94□□□□□ -0.5
GTF3C3-206ENST00000448539 REG4Q9BYZ8 158 aa11.94□□□□□ -0.5
GTF3C3-206ENST00000448539 RGCCQ9H4X1 137 aa11.94□□□□□ -0.5
GTF3C3-206ENST00000448539 NOP16Q9Y3C1 178 aaKnown RBP11.94□□□□□ -0.5
GTF3C3-206ENST00000448539 PCDHGB1Q9Y5G3 927 aa11.94□□□□□ -0.5
GTF3C3-206ENST00000448539 IGHV1-69-2A0A0G2JMI3 117 aa11.93□□□□□ -0.5
GTF3C3-206ENST00000448539 TMEM269A0A1B0GVZ9 245 aa11.93□□□□□ -0.5
GTF3C3-206ENST00000448539 A0A1W2PQL4 384 aaPredicted RBP11.93□□□□□ -0.5
GTF3C3-206ENST00000448539 CD300LBA8K4G0 201 aa11.93□□□□□ -0.5
GTF3C3-206ENST00000448539 NCR1O76036 304 aa11.93□□□□□ -0.5
GTF3C3-206ENST00000448539 KRT8P05787 483 aa11.93□□□□□ -0.5
GTF3C3-206ENST00000448539 ADH4P08319 380 aa11.93□□□□□ -0.5
GTF3C3-206ENST00000448539 GABRB1P18505 474 aa11.93□□□□□ -0.5
GTF3C3-206ENST00000448539 ACHEP22303 614 aa11.93□□□□□ -0.5
GTF3C3-206ENST00000448539 DCTDP32321 178 aa11.93□□□□□ -0.5
GTF3C3-206ENST00000448539 ACTC1P68032 377 aa11.93□□□□□ -0.5
GTF3C3-206ENST00000448539 ACTA1P68133 377 aa11.93□□□□□ -0.5
GTF3C3-206ENST00000448539 RFLNBQ8N5W9 214 aa11.93□□□□□ -0.5
GTF3C3-206ENST00000448539 REEP6Q96HR9 211 aa11.93□□□□□ -0.5
GTF3C3-206ENST00000448539 MYCBPQ99417 103 aaPredicted RBP11.93□□□□□ -0.5
GTF3C3-206ENST00000448539 REPIN1Q9BWE0 567 aaKnown RBP11.93□□□□□ -0.5
GTF3C3-206ENST00000448539 VCX3BQ9H321 246 aa11.93□□□□□ -0.5
GTF3C3-206ENST00000448539 CHODLQ9H9P2 273 aa11.93□□□□□ -0.5
GTF3C3-206ENST00000448539 DLL4Q9NR61 685 aa11.93□□□□□ -0.5
GTF3C3-206ENST00000448539 AASSQ9UDR5 926 aa11.93□□□□□ -0.5
GTF3C3-206ENST00000448539 GTF2A1LQ9UNN4 478 aa11.93□□□□□ -0.5
GTF3C3-206ENST00000448539 RPL36Q9Y3U8 105 aaKnown RBP11.93□□□□□ -0.5
GTF3C3-206ENST00000448539 DAPL1A0PJW8 107 aa11.92□□□□□ -0.5
GTF3C3-206ENST00000448539 C5orf63A6NC05 138 aa11.92□□□□□ -0.5
GTF3C3-206ENST00000448539 ACOD1A6NK06 481 aa11.92□□□□□ -0.5
GTF3C3-206ENST00000448539 LYNX1G3V0Z9 82 aa11.92□□□□□ -0.5
GTF3C3-206ENST00000448539 CDC14BO60729 498 aa11.92□□□□□ -0.5
GTF3C3-206ENST00000448539 CD55P08174 381 aa11.92□□□□□ -0.5
GTF3C3-206ENST00000448539 INHBBP09529 407 aa11.92□□□□□ -0.5
GTF3C3-206ENST00000448539 LYNX1P0DP58 116 aa11.92□□□□□ -0.5
GTF3C3-206ENST00000448539 TNFRSF1AP19438 455 aa11.92□□□□□ -0.5
GTF3C3-206ENST00000448539 COL8A2P25067 703 aa11.92□□□□□ -0.5
GTF3C3-206ENST00000448539 DDOSTP39656 456 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms