RNA–Protein interactions for RNA: ENST00000448428.1

PRPF40A-203, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 5

Gene PRPF40A, Length 490 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-203ENST00000448428 MRPL21Q7Z2W9 205 aaKnown RBP10.75□□□□□ -0.69
PRPF40A-203ENST00000448428 PEG10Q86TG7 708 aaKnown RBP10.75□□□□□ -0.69
PRPF40A-203ENST00000448428 RNF133Q8WVZ7 376 aa10.75□□□□□ -0.69
PRPF40A-203ENST00000448428 SPRYD4Q8WW59 207 aaPredicted RBP10.75□□□□□ -0.69
PRPF40A-203ENST00000448428 TMEM186Q96B77 213 aa10.75□□□□□ -0.69
PRPF40A-203ENST00000448428 MEGF10Q96KG7 1140 aa10.75□□□□□ -0.69
PRPF40A-203ENST00000448428 SIGLEC11Q96RL6 698 aa10.75□□□□□ -0.69
PRPF40A-203ENST00000448428 REPIN1Q9BWE0 567 aaKnown RBP10.75□□□□□ -0.69
PRPF40A-203ENST00000448428 TEX12Q9BXU0 123 aa10.75□□□□□ -0.69
PRPF40A-203ENST00000448428 IGHV3-64DA0A0J9YX35 117 aa10.74□□□□□ -0.69
PRPF40A-203ENST00000448428 ISPDA4D126 451 aa10.74□□□□□ -0.69
PRPF40A-203ENST00000448428 CD300LBA8K4G0 201 aa10.74□□□□□ -0.69
PRPF40A-203ENST00000448428 PLPP2O43688 288 aa10.74□□□□□ -0.69
PRPF40A-203ENST00000448428 IFNA2P01563 188 aa10.74□□□□□ -0.69
PRPF40A-203ENST00000448428 IGHV2-70P01814 119 aa10.74□□□□□ -0.69
PRPF40A-203ENST00000448428 ANPEPP15144 967 aa10.74□□□□□ -0.69
PRPF40A-203ENST00000448428 EPHA2P29317 976 aa10.74□□□□□ -0.69
PRPF40A-203ENST00000448428 CX3CR1P49238 355 aa10.74□□□□□ -0.69
PRPF40A-203ENST00000448428 SRP9P49458 86 aaKnown RBP10.74□□□□□ -0.69
PRPF40A-203ENST00000448428 ESRRGP62508 458 aa10.74□□□□□ -0.69
PRPF40A-203ENST00000448428 APOFQ13790 326 aa10.74□□□□□ -0.69
PRPF40A-203ENST00000448428 SLC35D3Q5M8T2 416 aa10.74□□□□□ -0.69
PRPF40A-203ENST00000448428 KDM4DQ6B0I6 523 aa10.74□□□□□ -0.69
PRPF40A-203ENST00000448428 CCDC121Q6ZUS5 278 aa10.74□□□□□ -0.69
PRPF40A-203ENST00000448428 RHOUQ7L0Q8 258 aa10.74□□□□□ -0.69
PRPF40A-203ENST00000448428 ZNF771Q7L3S4 317 aaPredicted RBP10.74□□□□□ -0.69
PRPF40A-203ENST00000448428 GLCCI1Q86VQ1 547 aa10.74□□□□□ -0.69
PRPF40A-203ENST00000448428 ZDHHC13Q8IUH4 622 aa10.74□□□□□ -0.69
PRPF40A-203ENST00000448428 OR51F2Q8NH61 342 aa10.74□□□□□ -0.69
PRPF40A-203ENST00000448428 OTOSQ8NHW6 89 aa10.74□□□□□ -0.69
PRPF40A-203ENST00000448428 ZNF420Q8TAQ5 688 aaPredicted RBP10.74□□□□□ -0.69
PRPF40A-203ENST00000448428 THEM6Q8WUY1 208 aa10.74□□□□□ -0.69
PRPF40A-203ENST00000448428 RAB39BQ96DA2 213 aa10.74□□□□□ -0.69
PRPF40A-203ENST00000448428 TEAD3Q99594 435 aa10.74□□□□□ -0.69
PRPF40A-203ENST00000448428 MDFIQ99750 246 aa10.74□□□□□ -0.69
PRPF40A-203ENST00000448428 GAL3ST1Q99999 423 aa10.74□□□□□ -0.69
PRPF40A-203ENST00000448428 SEMA6AQ9H2E6 1030 aa10.74□□□□□ -0.69
PRPF40A-203ENST00000448428 KRT84Q9NSB2 600 aa10.74□□□□□ -0.69
PRPF40A-203ENST00000448428 HIF1ANQ9NWT6 349 aa10.74□□□□□ -0.69
PRPF40A-203ENST00000448428 JMJD1CQ15652 2540 aa10.74□□□□□ -0.69
PRPF40A-203ENST00000448428 GGT3PA6NGU5 568 aa10.73□□□□□ -0.69
PRPF40A-203ENST00000448428 TMEM178BH3BS89 294 aa10.73□□□□□ -0.69
PRPF40A-203ENST00000448428 PRKYO43930 277 aa10.73□□□□□ -0.69
PRPF40A-203ENST00000448428 FCGR1AP12314 374 aa10.73□□□□□ -0.69
PRPF40A-203ENST00000448428 SRD5A1P18405 259 aa10.73□□□□□ -0.69
PRPF40A-203ENST00000448428 HNF1AP20823 631 aa10.73□□□□□ -0.69
PRPF40A-203ENST00000448428 CA6P23280 308 aa10.73□□□□□ -0.69
PRPF40A-203ENST00000448428 HSD11B1P28845 292 aa10.73□□□□□ -0.69
PRPF40A-203ENST00000448428 PMELP40967 661 aa10.73□□□□□ -0.69
PRPF40A-203ENST00000448428 OPRL1P41146 370 aa10.73□□□□□ -0.69
PRPF40A-203ENST00000448428 NAA10P41227 235 aaPredicted RBP10.73□□□□□ -0.69
PRPF40A-203ENST00000448428 MMP16P51512 607 aa10.73□□□□□ -0.69
PRPF40A-203ENST00000448428 HCCSP53701 268 aa10.73□□□□□ -0.69
PRPF40A-203ENST00000448428 RPS7P62081 194 aaKnown RBP10.73□□□□□ -0.69
PRPF40A-203ENST00000448428 EFNB1P98172 346 aa10.73□□□□□ -0.69
PRPF40A-203ENST00000448428 MAB21L1Q13394 359 aa10.73□□□□□ -0.69
PRPF40A-203ENST00000448428 ZMYND11Q15326 602 aa10.73□□□□□ -0.69
PRPF40A-203ENST00000448428 PRSS45Q7RTY3 260 aa10.73□□□□□ -0.69
PRPF40A-203ENST00000448428 LRRC28Q86X40 367 aaPredicted RBP10.73□□□□□ -0.69
PRPF40A-203ENST00000448428 ZNF454Q8N9F8 522 aa10.73□□□□□ -0.69
PRPF40A-203ENST00000448428 SPSB4Q96A44 273 aa10.73□□□□□ -0.69
PRPF40A-203ENST00000448428 SGK3Q96BR1 496 aa10.73□□□□□ -0.69
PRPF40A-203ENST00000448428 GABARAPL1Q9H0R8 117 aa10.73□□□□□ -0.69
PRPF40A-203ENST00000448428 TOR3AQ9H497 397 aa10.73□□□□□ -0.69
PRPF40A-203ENST00000448428 UBAP1Q9NZ09 502 aa10.73□□□□□ -0.69
PRPF40A-203ENST00000448428 ZNF319Q9P2F9 582 aa10.73□□□□□ -0.69
PRPF40A-203ENST00000448428 KLHDC2Q9Y2U9 406 aa10.73□□□□□ -0.69
PRPF40A-203ENST00000448428 ANK3Q12955 4377 aaKnown RBP10.73□□□□□ -0.69
PRPF40A-203ENST00000448428 TRAV20A0A0B4J274 112 aa10.72□□□□□ -0.69
PRPF40A-203ENST00000448428 CCDC182A6NF36 153 aa10.72□□□□□ -0.69
PRPF40A-203ENST00000448428 ZAR1LA6NP61 321 aa10.72□□□□□ -0.69
PRPF40A-203ENST00000448428 IFNL4K9M1U5 179 aa10.72□□□□□ -0.69
PRPF40A-203ENST00000448428 M0R129 80 aa10.72□□□□□ -0.69
PRPF40A-203ENST00000448428 TBX1O43435 398 aa10.72□□□□□ -0.69
PRPF40A-203ENST00000448428 XRCC2O43543 280 aa10.72□□□□□ -0.69
PRPF40A-203ENST00000448428 CYB5R3P00387 301 aaPredicted RBP10.72□□□□□ -0.69
PRPF40A-203ENST00000448428 APOC1P02654 83 aa10.72□□□□□ -0.69
PRPF40A-203ENST00000448428 ANXA2P07355 339 aaKnown RBP10.72□□□□□ -0.69
PRPF40A-203ENST00000448428 LYNP07948 512 aa10.72□□□□□ -0.69
PRPF40A-203ENST00000448428 H2BFMP0C1H6 154 aa10.72□□□□□ -0.69
PRPF40A-203ENST00000448428 ALOX5APP20292 161 aa10.72□□□□□ -0.69
PRPF40A-203ENST00000448428 ZNF121P58317 390 aaPredicted RBP10.72□□□□□ -0.69
PRPF40A-203ENST00000448428 ACTR3P61158 418 aa10.72□□□□□ -0.69
PRPF40A-203ENST00000448428 BTG1P62324 171 aa10.72□□□□□ -0.69
PRPF40A-203ENST00000448428 SLX4IPQ5VYV7 408 aa10.72□□□□□ -0.69
PRPF40A-203ENST00000448428 FAM57BQ71RH2 274 aa10.72□□□□□ -0.69
PRPF40A-203ENST00000448428 SLC16A9Q7RTY1 509 aa10.72□□□□□ -0.69
PRPF40A-203ENST00000448428 BCDIN3DQ7Z5W3 292 aaKnown RBP10.72□□□□□ -0.69
PRPF40A-203ENST00000448428 MOGAT3Q86VF5 341 aa10.72□□□□□ -0.69
PRPF40A-203ENST00000448428 HIST2H2ABQ8IUE6 130 aaPredicted RBP10.72□□□□□ -0.69
PRPF40A-203ENST00000448428 PYDC1Q8WXC3 89 aa10.72□□□□□ -0.69
PRPF40A-203ENST00000448428 CENPNQ96H22 339 aaPredicted RBP10.72□□□□□ -0.69
PRPF40A-203ENST00000448428 SP140LQ9H930 580 aa10.72□□□□□ -0.69
PRPF40A-203ENST00000448428 BRD7Q9NPI1 651 aa10.72□□□□□ -0.69
PRPF40A-203ENST00000448428 DNAJC27Q9NZQ0 273 aa10.72□□□□□ -0.69
PRPF40A-203ENST00000448428 ZNF205O95201 554 aa10.71□□□□□ -0.69
PRPF40A-203ENST00000448428 PCMT1P22061 227 aa10.71□□□□□ -0.69
PRPF40A-203ENST00000448428 POLR2IP36954 125 aaKnown RBP10.71□□□□□ -0.69
PRPF40A-203ENST00000448428 CD200P41217 278 aa10.71□□□□□ -0.69
PRPF40A-203ENST00000448428 GATA4P43694 442 aa10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms