RNA–Protein interactions for RNA: ENST00000448416.6

SYNPO2-204, Transcript of synaptopodin 2, humanhuman

TSL 2 BASIC

Gene SYNPO2, Length 4,298 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-204ENST00000448416 H7C1C5 153 aa8.43□□□□□ -1.06
SYNPO2-204ENST00000448416 NUDT21O43809 227 aaKnown RBP8.43□□□□□ -1.06
SYNPO2-204ENST00000448416 C1QL1O75973 258 aa8.43□□□□□ -1.06
SYNPO2-204ENST00000448416 DANCRP0C864 163 aa8.43□□□□□ -1.06
SYNPO2-204ENST00000448416 GABRA3P34903 492 aa8.43□□□□□ -1.06
SYNPO2-204ENST00000448416 LCN6P62502 163 aa8.43□□□□□ -1.06
SYNPO2-204ENST00000448416 SLC35A1P78382 337 aa8.43□□□□□ -1.06
SYNPO2-204ENST00000448416 DMWDQ09019 674 aa8.43□□□□□ -1.06
SYNPO2-204ENST00000448416 PPA1Q15181 289 aa8.43□□□□□ -1.06
SYNPO2-204ENST00000448416 ANKRD55Q3KP44 614 aa8.43□□□□□ -1.06
SYNPO2-204ENST00000448416 ULK3Q6PHR2 472 aa8.43□□□□□ -1.06
SYNPO2-204ENST00000448416 ZNF550Q7Z398 422 aa8.43□□□□□ -1.06
SYNPO2-204ENST00000448416 KDM8Q8N371 416 aa8.43□□□□□ -1.06
SYNPO2-204ENST00000448416 OR13D1Q8NGV5 346 aa8.43□□□□□ -1.06
SYNPO2-204ENST00000448416 CYB5D2Q8WUJ1 264 aa8.43□□□□□ -1.06
SYNPO2-204ENST00000448416 FRZBQ92765 325 aa8.43□□□□□ -1.06
SYNPO2-204ENST00000448416 LMLNQ96KR4 655 aa8.43□□□□□ -1.06
SYNPO2-204ENST00000448416 OR11A1Q9GZK7 315 aa8.43□□□□□ -1.06
SYNPO2-204ENST00000448416 SLC25A31Q9H0C2 315 aa8.43□□□□□ -1.06
SYNPO2-204ENST00000448416 TMEM14AQ9Y6G1 99 aa8.43□□□□□ -1.06
SYNPO2-204ENST00000448416 DDNO94850 711 aaPredicted RBP8.43□□□□□ -1.06
SYNPO2-204ENST00000448416 GALTP07902 379 aa8.43□□□□□ -1.06
SYNPO2-204ENST00000448416 ELNP15502 786 aa8.43□□□□□ -1.06
SYNPO2-204ENST00000448416 THBS4P35443 961 aa8.43□□□□□ -1.06
SYNPO2-204ENST00000448416 CD200P41217 278 aa8.43□□□□□ -1.06
SYNPO2-204ENST00000448416 CLDN6P56747 220 aa8.43□□□□□ -1.06
SYNPO2-204ENST00000448416 EGR3Q06889 387 aa8.43□□□□□ -1.06
SYNPO2-204ENST00000448416 MORN1Q5T089 497 aa8.43□□□□□ -1.06
SYNPO2-204ENST00000448416 KIRREL2Q6UWL6 708 aa8.43□□□□□ -1.06
SYNPO2-204ENST00000448416 NPSR1Q6W5P4 371 aa8.43□□□□□ -1.06
SYNPO2-204ENST00000448416 ZAR1Q86SH2 424 aa8.43□□□□□ -1.06
SYNPO2-204ENST00000448416 OR51A2Q8NGJ7 313 aa8.43□□□□□ -1.06
SYNPO2-204ENST00000448416 OR2A1Q8NGT9 310 aa8.43□□□□□ -1.06
SYNPO2-204ENST00000448416 OR10J5Q8NHC4 309 aa8.43□□□□□ -1.06
SYNPO2-204ENST00000448416 ZNF461Q8TAF7 563 aa8.43□□□□□ -1.06
SYNPO2-204ENST00000448416 OR2M4Q96R27 311 aa8.43□□□□□ -1.06
SYNPO2-204ENST00000448416 C5orf66Q9H5L9 145 aa8.43□□□□□ -1.06
SYNPO2-204ENST00000448416 APOBEC3BQ9UH17 382 aaKnown RBP8.43□□□□□ -1.06
SYNPO2-204ENST00000448416 SERPINA2P20848 420 aa8.43□□□□□ -1.06
SYNPO2-204ENST00000448416 ACAA2P42765 397 aaKnown RBP8.43□□□□□ -1.06
SYNPO2-204ENST00000448416 EMDP50402 254 aa8.43□□□□□ -1.06
SYNPO2-204ENST00000448416 SLC25A1P53007 311 aa8.43□□□□□ -1.06
SYNPO2-204ENST00000448416 OTPQ5XKR4 325 aa8.43□□□□□ -1.06
SYNPO2-204ENST00000448416 C5orf24Q7Z6I8 188 aa8.43□□□□□ -1.06
SYNPO2-204ENST00000448416 ABHD5Q8WTS1 349 aa8.43□□□□□ -1.06
SYNPO2-204ENST00000448416 TMEM230Q96A57 120 aa8.43□□□□□ -1.06
SYNPO2-204ENST00000448416 NUS1Q96E22 293 aa8.43□□□□□ -1.06
SYNPO2-204ENST00000448416 AMELYQ99218 206 aa8.43□□□□□ -1.06
SYNPO2-204ENST00000448416 MENTQ9BUN1 341 aa8.43□□□□□ -1.06
SYNPO2-204ENST00000448416 GPR132Q9UNW8 380 aa8.43□□□□□ -1.06
SYNPO2-204ENST00000448416 CCDC187A0A096LP49 1063 aa8.42□□□□□ -1.06
SYNPO2-204ENST00000448416 GZMBP10144 247 aa8.42□□□□□ -1.06
SYNPO2-204ENST00000448416 ZNF708P17019 499 aa8.42□□□□□ -1.06
SYNPO2-204ENST00000448416 APLNRP35414 380 aa8.42□□□□□ -1.06
SYNPO2-204ENST00000448416 DNASE1L1P49184 302 aa8.42□□□□□ -1.06
SYNPO2-204ENST00000448416 CTXN1P60606 82 aa8.42□□□□□ -1.06
SYNPO2-204ENST00000448416 PRPS1P60891 318 aa8.42□□□□□ -1.06
SYNPO2-204ENST00000448416 ISXQ2M1V0 245 aa8.42□□□□□ -1.06
SYNPO2-204ENST00000448416 GPR137CQ8N3F9 429 aa8.42□□□□□ -1.06
SYNPO2-204ENST00000448416 DTD1Q8TEA8 209 aa8.42□□□□□ -1.06
SYNPO2-204ENST00000448416 FAM46BQ96A09 425 aa8.42□□□□□ -1.06
SYNPO2-204ENST00000448416 RARRES2Q99969 163 aa8.42□□□□□ -1.06
SYNPO2-204ENST00000448416 OPN3Q9H1Y3 402 aaPredicted RBP8.42□□□□□ -1.06
SYNPO2-204ENST00000448416 KIAA1549LQ6ZVL6 1849 aa8.42□□□□□ -1.06
SYNPO2-204ENST00000448416 DVL1O14640 695 aa8.42□□□□□ -1.06
SYNPO2-204ENST00000448416 GIMD1P0DJR0 217 aa8.42□□□□□ -1.06
SYNPO2-204ENST00000448416 RGS19P49795 217 aa8.42□□□□□ -1.06
SYNPO2-204ENST00000448416 AFF3P51826 1226 aaKnown RBP8.42□□□□□ -1.06
SYNPO2-204ENST00000448416 GPR18Q14330 331 aa8.42□□□□□ -1.06
SYNPO2-204ENST00000448416 TAF1CQ15572 869 aaPredicted RBP8.42□□□□□ -1.06
SYNPO2-204ENST00000448416 MEP1BQ16820 701 aa8.42□□□□□ -1.06
SYNPO2-204ENST00000448416 LCN10Q6JVE6 187 aa8.42□□□□□ -1.06
SYNPO2-204ENST00000448416 TMEM184AQ6ZMB5 413 aa8.42□□□□□ -1.06
SYNPO2-204ENST00000448416 CDRT4Q8N9R6 151 aa8.42□□□□□ -1.06
SYNPO2-204ENST00000448416 SNHG12Q9BXW3 62 aa8.42□□□□□ -1.06
SYNPO2-204ENST00000448416 BORCS7-ASMTA0A0B4J1R7 106 aa8.42□□□□□ -1.06
SYNPO2-204ENST00000448416 MEGF11A6BM72 1044 aa8.42□□□□□ -1.06
SYNPO2-204ENST00000448416 WIPF3A6NGB9 483 aa8.42□□□□□ -1.06
SYNPO2-204ENST00000448416 LDLRAD4O15165 306 aa8.42□□□□□ -1.06
SYNPO2-204ENST00000448416 SLC35G4P0C7Q5 338 aa8.42□□□□□ -1.06
SYNPO2-204ENST00000448416 SEC11BP0C7V7 166 aa8.42□□□□□ -1.06
SYNPO2-204ENST00000448416 GNB3P16520 340 aa8.42□□□□□ -1.06
SYNPO2-204ENST00000448416 TBPP20226 339 aa8.42□□□□□ -1.06
SYNPO2-204ENST00000448416 GJA4P35212 333 aa8.42□□□□□ -1.06
SYNPO2-204ENST00000448416 SLC7A9P82251 487 aa8.42□□□□□ -1.06
SYNPO2-204ENST00000448416 ITPRIPL2Q3MIP1 535 aa8.42□□□□□ -1.06
SYNPO2-204ENST00000448416 SLC35D2Q76EJ3 337 aa8.42□□□□□ -1.06
SYNPO2-204ENST00000448416 PARS2Q7L3T8 475 aaKnown RBP8.42□□□□□ -1.06
SYNPO2-204ENST00000448416 TMEM25Q86YD3 366 aa8.42□□□□□ -1.06
SYNPO2-204ENST00000448416 CARFQ8N187 725 aa8.42□□□□□ -1.06
SYNPO2-204ENST00000448416 ASB5Q8WWX0 329 aa8.42□□□□□ -1.06
SYNPO2-204ENST00000448416 SNX22Q96L94 193 aa8.42□□□□□ -1.06
SYNPO2-204ENST00000448416 MOGAT1Q96PD6 335 aa8.42□□□□□ -1.06
SYNPO2-204ENST00000448416 RAB22AQ9UL26 194 aa8.42□□□□□ -1.06
SYNPO2-204ENST00000448416 C19orf53Q9UNZ5 99 aaPredicted RBP8.42□□□□□ -1.06
SYNPO2-204ENST00000448416 LSM5Q9Y4Y9 91 aaKnown RBP8.42□□□□□ -1.06
SYNPO2-204ENST00000448416 CXorf51AA0A1B0GTR3 108 aa8.41□□□□□ -1.06
SYNPO2-204ENST00000448416 HLA-DQA2P01906 255 aa8.41□□□□□ -1.06
SYNPO2-204ENST00000448416 PPP1CCP36873 323 aaKnown RBP8.41□□□□□ -1.06
SYNPO2-204ENST00000448416 GRK6P43250 576 aa8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms