RNA–Protein interactions for RNA: ENST00000447345.5

RFC4-208, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 785 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-208ENST00000447345 SBK2P0C263 348 aa10.13□□□□□ -0.79
RFC4-208ENST00000447345 FOSL1P15407 271 aa10.13□□□□□ -0.79
RFC4-208ENST00000447345 HTR1FP30939 366 aa10.13□□□□□ -0.79
RFC4-208ENST00000447345 RBMXP38159 391 aaKnown RBP10.13□□□□□ -0.79
RFC4-208ENST00000447345 LIPAP38571 399 aa10.13□□□□□ -0.79
RFC4-208ENST00000447345 NR4A2P43354 598 aa10.13□□□□□ -0.79
RFC4-208ENST00000447345 PSMA6P60900 246 aaKnown RBP10.13□□□□□ -0.79
RFC4-208ENST00000447345 CXCR4P61073 352 aa10.13□□□□□ -0.79
RFC4-208ENST00000447345 TNFAIP6P98066 277 aaPredicted RBP10.13□□□□□ -0.79
RFC4-208ENST00000447345 TIGD6Q17RP2 521 aa10.13□□□□□ -0.79
RFC4-208ENST00000447345 KCTD18Q6PI47 426 aaPredicted RBP10.13□□□□□ -0.79
RFC4-208ENST00000447345 CLEC9AQ6UXN8 241 aa10.13□□□□□ -0.79
RFC4-208ENST00000447345 PLEKHG7Q6ZR37 379 aa10.13□□□□□ -0.79
RFC4-208ENST00000447345 SPRYD4Q8WW59 207 aaPredicted RBP10.13□□□□□ -0.79
RFC4-208ENST00000447345 RDH5Q92781 318 aa10.13□□□□□ -0.79
RFC4-208ENST00000447345 DVL3Q92997 716 aaPredicted RBP10.13□□□□□ -0.79
RFC4-208ENST00000447345 PGAM5Q96HS1 289 aa10.13□□□□□ -0.79
RFC4-208ENST00000447345 ZNF275Q9NSD4 429 aaPredicted RBP10.13□□□□□ -0.79
RFC4-208ENST00000447345 WARS2Q9UGM6 360 aaKnown RBP10.13□□□□□ -0.79
RFC4-208ENST00000447345 ZDHHC8Q9ULC8 765 aa10.13□□□□□ -0.79
RFC4-208ENST00000447345 CSPG4Q6UVK1 2322 aa10.12□□□□□ -0.79
RFC4-208ENST00000447345 A0A096LNT2 108 aa10.12□□□□□ -0.79
RFC4-208ENST00000447345 IGHV4-61A0A0C4DH41 118 aa10.12□□□□□ -0.79
RFC4-208ENST00000447345 IGHV1-69-2A0A0G2JMI3 117 aa10.12□□□□□ -0.79
RFC4-208ENST00000447345 LRP5LA4QPB2 252 aa10.12□□□□□ -0.79
RFC4-208ENST00000447345 GGT3PA6NGU5 568 aa10.12□□□□□ -0.79
RFC4-208ENST00000447345 IQCF6A8MYZ5 107 aa10.12□□□□□ -0.79
RFC4-208ENST00000447345 VWC2LB2RUY7 222 aa10.12□□□□□ -0.79
RFC4-208ENST00000447345 ZNF670-ZNF695F2Z2N8 137 aa10.12□□□□□ -0.79
RFC4-208ENST00000447345 H0YL77 283 aa10.12□□□□□ -0.79
RFC4-208ENST00000447345 PPIHO43447 177 aaKnown RBP10.12□□□□□ -0.79
RFC4-208ENST00000447345 XRCC2O43543 280 aa10.12□□□□□ -0.79
RFC4-208ENST00000447345 ENTPD6O75354 484 aa10.12□□□□□ -0.79
RFC4-208ENST00000447345 LY6G6DO95868 133 aa10.12□□□□□ -0.79
RFC4-208ENST00000447345 APOC1P02654 83 aa10.12□□□□□ -0.79
RFC4-208ENST00000447345 HLA-DPB1P04440 258 aa10.12□□□□□ -0.79
RFC4-208ENST00000447345 SELEP16581 610 aa10.12□□□□□ -0.79
RFC4-208ENST00000447345 ACHEP22303 614 aa10.12□□□□□ -0.79
RFC4-208ENST00000447345 USF1P22415 310 aaPredicted RBP10.12□□□□□ -0.79
RFC4-208ENST00000447345 TNFSF4P23510 183 aa10.12□□□□□ -0.79
RFC4-208ENST00000447345 ATP6V1E1P36543 226 aa10.12□□□□□ -0.79
RFC4-208ENST00000447345 FAM209AQ5JX71 171 aa10.12□□□□□ -0.79
RFC4-208ENST00000447345 AVPI1Q5T686 147 aa10.12□□□□□ -0.79
RFC4-208ENST00000447345 ZNF322Q6U7Q0 402 aaPredicted RBP10.12□□□□□ -0.79
RFC4-208ENST00000447345 SSX6Q7RTT6 188 aa10.12□□□□□ -0.79
RFC4-208ENST00000447345 BIVMQ86UB2 503 aa10.12□□□□□ -0.79
RFC4-208ENST00000447345 ENTHD1Q8IYW4 607 aa10.12□□□□□ -0.79
RFC4-208ENST00000447345 ZNF555Q8NEP9 628 aa10.12□□□□□ -0.79
RFC4-208ENST00000447345 OR8G5Q8NG78 346 aa10.12□□□□□ -0.79
RFC4-208ENST00000447345 OR10H4Q8NGA5 316 aa10.12□□□□□ -0.79
RFC4-208ENST00000447345 OR56B2PQ8NGI1 322 aa10.12□□□□□ -0.79
RFC4-208ENST00000447345 CYGBQ8WWM9 190 aa10.12□□□□□ -0.79
RFC4-208ENST00000447345 RFKQ969G6 155 aa10.12□□□□□ -0.79
RFC4-208ENST00000447345 REEP6Q96HR9 211 aa10.12□□□□□ -0.79
RFC4-208ENST00000447345 OR8B4Q96RC9 309 aa10.12□□□□□ -0.79
RFC4-208ENST00000447345 MROQ9BYG7 248 aa10.12□□□□□ -0.79
RFC4-208ENST00000447345 EGLN1Q9GZT9 426 aa10.12□□□□□ -0.79
RFC4-208ENST00000447345 CHODLQ9H9P2 273 aa10.12□□□□□ -0.79
RFC4-208ENST00000447345 FAM118AQ9NWS6 357 aa10.12□□□□□ -0.79
RFC4-208ENST00000447345 CLN6Q9NWW5 311 aa10.12□□□□□ -0.79
RFC4-208ENST00000447345 NKIRAS2Q9NYR9 191 aa10.12□□□□□ -0.79
RFC4-208ENST00000447345 ZNF319Q9P2F9 582 aa10.12□□□□□ -0.79
RFC4-208ENST00000447345 GTF2A1LQ9UNN4 478 aa10.12□□□□□ -0.79
RFC4-208ENST00000447345 TMEM14AQ9Y6G1 99 aa10.12□□□□□ -0.79
RFC4-208ENST00000447345 NSD1Q96L73 2696 aaPredicted RBP10.12□□□□□ -0.79
RFC4-208ENST00000447345 MALRD1Q5VYJ5 2156 aa10.12□□□□□ -0.79
RFC4-208ENST00000447345 LOC100130705A0A1B0GUX0 176 aa10.11□□□□□ -0.79
RFC4-208ENST00000447345 CD300LBA8K4G0 201 aa10.11□□□□□ -0.79
RFC4-208ENST00000447345 E9PQ18 207 aa10.11□□□□□ -0.79
RFC4-208ENST00000447345 F5H5P2 479 aa10.11□□□□□ -0.79
RFC4-208ENST00000447345 DLGAP1O14490 977 aa10.11□□□□□ -0.79
RFC4-208ENST00000447345 MLNRO43193 412 aa10.11□□□□□ -0.79
RFC4-208ENST00000447345 RP2O75695 350 aa10.11□□□□□ -0.79
RFC4-208ENST00000447345 CLIC3O95833 236 aa10.11□□□□□ -0.79
RFC4-208ENST00000447345 GIFP27352 417 aa10.11□□□□□ -0.79
RFC4-208ENST00000447345 GPR6P46095 362 aaPredicted RBP10.11□□□□□ -0.79
RFC4-208ENST00000447345 SNRPGP62308 76 aaKnown RBP10.11□□□□□ -0.79
RFC4-208ENST00000447345 MFGE8Q08431 387 aaPredicted RBP10.11□□□□□ -0.79
RFC4-208ENST00000447345 POU4F2Q12837 409 aa10.11□□□□□ -0.79
RFC4-208ENST00000447345 CDK5R2Q13319 367 aa10.11□□□□□ -0.79
RFC4-208ENST00000447345 HFEQ30201 348 aa10.11□□□□□ -0.79
RFC4-208ENST00000447345 ZNF771Q7L3S4 317 aaPredicted RBP10.11□□□□□ -0.79
RFC4-208ENST00000447345 PRSS45Q7RTY3 260 aa10.11□□□□□ -0.79
RFC4-208ENST00000447345 COMMD2Q86X83 199 aa10.11□□□□□ -0.79
RFC4-208ENST00000447345 OR8B12Q8NGG6 310 aa10.11□□□□□ -0.79
RFC4-208ENST00000447345 ITLN1Q8WWA0 313 aa10.11□□□□□ -0.79
RFC4-208ENST00000447345 TRUB1Q8WWH5 349 aaKnown RBP10.11□□□□□ -0.79
RFC4-208ENST00000447345 ASB17Q8WXJ9 295 aa10.11□□□□□ -0.79
RFC4-208ENST00000447345 CCL17Q92583 94 aa10.11□□□□□ -0.79
RFC4-208ENST00000447345 RNFT2Q96EX2 444 aa10.11□□□□□ -0.79
RFC4-208ENST00000447345 OR2V2Q96R30 315 aa10.11□□□□□ -0.79
RFC4-208ENST00000447345 DIRC2Q96SL1 478 aa10.11□□□□□ -0.79
RFC4-208ENST00000447345 APOL4Q9BPW4 351 aa10.11□□□□□ -0.79
RFC4-208ENST00000447345 ADAT1Q9BUB4 502 aaKnown RBP10.11□□□□□ -0.79
RFC4-208ENST00000447345 OR10A2Q9H208 303 aa10.11□□□□□ -0.79
RFC4-208ENST00000447345 HAO2Q9NYQ3 351 aa10.11□□□□□ -0.79
RFC4-208ENST00000447345 NKX1-2Q9UD57 310 aaPredicted RBP10.11□□□□□ -0.79
RFC4-208ENST00000447345 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.11□□□□□ -0.795e-8■■■■■ 64.9
RFC4-208ENST00000447345 TMEM269A0A1B0GVZ9 245 aa10.1□□□□□ -0.79
RFC4-208ENST00000447345 A0A1W2PQL4 384 aaPredicted RBP10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms