RNA–Protein interactions for RNA: ENST00000445369.2

CLDN9-201, Transcript of claudin 9, humanhuman

APPRIS P1 BASIC

Gene CLDN9, Length 2,050 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN9-201ENST00000445369 DISC1C4P0D8 188 aa15.75■□□□□ 0.11
CLDN9-201ENST00000445369 C9J4A7 227 aa15.75■□□□□ 0.11
CLDN9-201ENST00000445369 ARPC5O15511 151 aa15.75■□□□□ 0.11
CLDN9-201ENST00000445369 ZNF17P17021 662 aa15.75■□□□□ 0.11
CLDN9-201ENST00000445369 GSK3AP49840 483 aa15.75■□□□□ 0.11
CLDN9-201ENST00000445369 NHLRC3Q5JS37 347 aa15.75■□□□□ 0.11
CLDN9-201ENST00000445369 RNF144BQ7Z419 303 aa15.75■□□□□ 0.11
CLDN9-201ENST00000445369 ANGPTL5Q86XS5 388 aa15.75■□□□□ 0.11
CLDN9-201ENST00000445369 C12orf45Q8N5I9 185 aaPredicted RBP15.75■□□□□ 0.11
CLDN9-201ENST00000445369 CHST4Q8NCG5 386 aa15.75■□□□□ 0.11
CLDN9-201ENST00000445369 SH2D2AQ9NP31 389 aa15.75■□□□□ 0.11
CLDN9-201ENST00000445369 NCOA6Q14686 2063 aaPredicted RBP15.74■□□□□ 0.11
CLDN9-201ENST00000445369 TLX3O43711 291 aaPredicted RBP15.74■□□□□ 0.11
CLDN9-201ENST00000445369 PDGFBP01127 241 aaPredicted RBP15.74■□□□□ 0.11
CLDN9-201ENST00000445369 NR2C1P13056 603 aa15.74■□□□□ 0.11
CLDN9-201ENST00000445369 LIFP15018 202 aa15.74■□□□□ 0.11
CLDN9-201ENST00000445369 S100A11P31949 105 aa15.74■□□□□ 0.11
CLDN9-201ENST00000445369 GRB2P62993 217 aaKnown RBP15.74■□□□□ 0.11
CLDN9-201ENST00000445369 SCGB2B2Q4G0G5 96 aa15.74■□□□□ 0.11
CLDN9-201ENST00000445369 RNASE10Q5GAN6 216 aaKnown RBP15.74■□□□□ 0.11
CLDN9-201ENST00000445369 LY6G6FQ5SQ64 297 aa15.74■□□□□ 0.11
CLDN9-201ENST00000445369 C11orf88Q6PI97 169 aa15.74■□□□□ 0.11
CLDN9-201ENST00000445369 PGAP1Q75T13 922 aa15.74■□□□□ 0.11
CLDN9-201ENST00000445369 COMMD7Q86VX2 200 aa15.74■□□□□ 0.11
CLDN9-201ENST00000445369 COMMD2Q86X83 199 aa15.74■□□□□ 0.11
CLDN9-201ENST00000445369 PAQR8Q8TEZ7 354 aa15.74■□□□□ 0.11
CLDN9-201ENST00000445369 NUDCD2Q8WVJ2 157 aa15.74■□□□□ 0.11
CLDN9-201ENST00000445369 PRRT1Q99946 306 aa15.74■□□□□ 0.11
CLDN9-201ENST00000445369 TEX51A0A1B0GUA7 166 aa15.74■□□□□ 0.11
CLDN9-201ENST00000445369 SSR4P51571 173 aa15.74■□□□□ 0.11
CLDN9-201ENST00000445369 RAB14P61106 215 aa15.74■□□□□ 0.11
CLDN9-201ENST00000445369 LSM6P62312 80 aaKnown RBP15.74■□□□□ 0.11
CLDN9-201ENST00000445369 MC2RQ01718 297 aa15.74■□□□□ 0.11
CLDN9-201ENST00000445369 CAMK2BQ13554 666 aa15.74■□□□□ 0.11
CLDN9-201ENST00000445369 HLXQ14774 488 aaPredicted RBP15.74■□□□□ 0.11
CLDN9-201ENST00000445369 ZMYND11Q15326 602 aa15.74■□□□□ 0.11
CLDN9-201ENST00000445369 C10orf128Q5T292 105 aa15.74■□□□□ 0.11
CLDN9-201ENST00000445369 OR2W3Q7Z3T1 314 aa15.74■□□□□ 0.11
CLDN9-201ENST00000445369 GVQW1Q8N7I0 195 aa15.74■□□□□ 0.11
CLDN9-201ENST00000445369 OR2Y1Q8NGV0 311 aa15.74■□□□□ 0.11
CLDN9-201ENST00000445369 OR10R2Q8NGX6 335 aa15.74■□□□□ 0.11
CLDN9-201ENST00000445369 C1orf147Q96MC9 270 aaPredicted RBP15.74■□□□□ 0.11
CLDN9-201ENST00000445369 ZNF416Q9BWM5 594 aa15.74■□□□□ 0.11
CLDN9-201ENST00000445369 VSIG4Q9Y279 399 aa15.74■□□□□ 0.11
CLDN9-201ENST00000445369 FXYD6-FXYD2A0A087WZ82 144 aa15.73■□□□□ 0.11
CLDN9-201ENST00000445369 GNB3P16520 340 aa15.73■□□□□ 0.11
CLDN9-201ENST00000445369 ZNF133P52736 654 aaPredicted RBP15.73■□□□□ 0.11
CLDN9-201ENST00000445369 AP2S1P53680 142 aaPredicted RBP15.73■□□□□ 0.11
CLDN9-201ENST00000445369 DSCR4P56555 118 aaPredicted RBP15.73■□□□□ 0.11
CLDN9-201ENST00000445369 DHRS2Q13268 280 aa15.73■□□□□ 0.11
CLDN9-201ENST00000445369 NKPD1Q17RQ9 610 aa15.73■□□□□ 0.11
CLDN9-201ENST00000445369 TMUB2Q71RG4 321 aa15.73■□□□□ 0.11
CLDN9-201ENST00000445369 DOK3Q7L591 496 aa15.73■□□□□ 0.11
CLDN9-201ENST00000445369 CCDC28AQ8IWP9 274 aa15.73■□□□□ 0.11
CLDN9-201ENST00000445369 ZNF283Q8N7M2 679 aa15.73■□□□□ 0.11
CLDN9-201ENST00000445369 TMEM54Q969K7 222 aa15.73■□□□□ 0.11
CLDN9-201ENST00000445369 MRGPRFQ96AM1 343 aa15.73■□□□□ 0.11
CLDN9-201ENST00000445369 FAM71F1Q96KD3 344 aaPredicted RBP15.73■□□□□ 0.11
CLDN9-201ENST00000445369 GNRHR2Q96P88 292 aa15.73■□□□□ 0.11
CLDN9-201ENST00000445369 SPACA5Q96QH8 159 aa15.73■□□□□ 0.11
CLDN9-201ENST00000445369 FXYD6Q9H0Q3 95 aa15.73■□□□□ 0.11
CLDN9-201ENST00000445369 ZIC3O60481 467 aa15.72■□□□□ 0.11
CLDN9-201ENST00000445369 CSN2P05814 226 aa15.72■□□□□ 0.11
CLDN9-201ENST00000445369 RRASP10301 218 aa15.72■□□□□ 0.11
CLDN9-201ENST00000445369 CTSSP25774 331 aa15.72■□□□□ 0.11
CLDN9-201ENST00000445369 CSNK1A1P48729 337 aa15.72■□□□□ 0.11
CLDN9-201ENST00000445369 DUSP3P51452 185 aaPredicted RBP15.72■□□□□ 0.11
CLDN9-201ENST00000445369 SLC22A6Q4U2R8 563 aa15.72■□□□□ 0.11
CLDN9-201ENST00000445369 PHYHD1Q5SRE7 291 aa15.72■□□□□ 0.11
CLDN9-201ENST00000445369 RAET1LQ5VY80 246 aa15.72■□□□□ 0.11
CLDN9-201ENST00000445369 GLIPR1L1Q6UWM5 242 aa15.72■□□□□ 0.11
CLDN9-201ENST00000445369 C17orf107Q6ZR85 190 aa15.72■□□□□ 0.11
CLDN9-201ENST00000445369 FOXL2NBQ6ZUU3 175 aa15.72■□□□□ 0.11
CLDN9-201ENST00000445369 FAM57BQ71RH2 274 aa15.72■□□□□ 0.11
CLDN9-201ENST00000445369 CD163Q86VB7 1156 aa15.72■□□□□ 0.11
CLDN9-201ENST00000445369 ZNF101Q8IZC7 436 aa15.72■□□□□ 0.11
CLDN9-201ENST00000445369 DTWD2Q8NBA8 298 aa15.72■□□□□ 0.11
CLDN9-201ENST00000445369 NICN1Q9BSH3 213 aa15.72■□□□□ 0.11
CLDN9-201ENST00000445369 LPAR5Q9H1C0 372 aa15.72■□□□□ 0.11
CLDN9-201ENST00000445369 KCNN3Q9UGI6 736 aa15.72■□□□□ 0.11
CLDN9-201ENST00000445369 MRPS28Q9Y2Q9 187 aaKnown RBP15.72■□□□□ 0.11
CLDN9-201ENST00000445369 A0A0A6YYD4 124 aa15.72■□□□□ 0.11
CLDN9-201ENST00000445369 SSX5O60225 188 aa15.72■□□□□ 0.11
CLDN9-201ENST00000445369 MSR1P21757 451 aa15.72■□□□□ 0.11
CLDN9-201ENST00000445369 SFRP5Q5T4F7 317 aa15.72■□□□□ 0.11
CLDN9-201ENST00000445369 OR52W1Q6IF63 320 aa15.72■□□□□ 0.11
CLDN9-201ENST00000445369 RTN4RL2Q86UN3 420 aa15.72■□□□□ 0.11
CLDN9-201ENST00000445369 STEAP2Q8NFT2 490 aa15.72■□□□□ 0.11
CLDN9-201ENST00000445369 SSC4DQ8WTU2 575 aa15.72■□□□□ 0.11
CLDN9-201ENST00000445369 SELENOIQ9C0D9 397 aa15.72■□□□□ 0.11
CLDN9-201ENST00000445369 KIF25Q9UIL4 384 aa15.72■□□□□ 0.11
CLDN9-201ENST00000445369 FBXO4Q9UKT5 387 aa15.72■□□□□ 0.11
CLDN9-201ENST00000445369 E9PLN8 166 aa15.71■□□□□ 0.11
CLDN9-201ENST00000445369 SHOXO15266 292 aa15.71■□□□□ 0.11
CLDN9-201ENST00000445369 EIF1BO60739 113 aaKnown RBP15.71■□□□□ 0.11
CLDN9-201ENST00000445369 RP2O75695 350 aa15.71■□□□□ 0.11
CLDN9-201ENST00000445369 CER1O95813 267 aa15.71■□□□□ 0.11
CLDN9-201ENST00000445369 IGLV3-1P01715 115 aa15.71■□□□□ 0.11
CLDN9-201ENST00000445369 CHRM2P08172 466 aa15.71■□□□□ 0.11
CLDN9-201ENST00000445369 PPP3CBP16298 524 aa15.71■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms