RNA–Protein interactions for RNA: ENST00000444475.5

UBR3-206, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 5

Gene UBR3, Length 3,821 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-206ENST00000444475 TROQ12816 1431 aaPredicted RBP3.36□□□□□ -1.87
UBR3-206ENST00000444475 FAM159BA6NKW6 160 aa3.36□□□□□ -1.87
UBR3-206ENST00000444475 SPI1P17947 270 aa3.36□□□□□ -1.87
UBR3-206ENST00000444475 S100A7P31151 101 aa3.36□□□□□ -1.87
UBR3-206ENST00000444475 RCVRNP35243 200 aa3.36□□□□□ -1.87
UBR3-206ENST00000444475 RAB25P57735 213 aa3.36□□□□□ -1.87
UBR3-206ENST00000444475 OSTNP61366 133 aa3.36□□□□□ -1.87
UBR3-206ENST00000444475 TAF10Q12962 218 aa3.36□□□□□ -1.87
UBR3-206ENST00000444475 IHHQ14623 411 aa3.36□□□□□ -1.87
UBR3-206ENST00000444475 KCNJ8Q15842 424 aa3.36□□□□□ -1.87
UBR3-206ENST00000444475 OR2B11Q5JQS5 317 aa3.36□□□□□ -1.87
UBR3-206ENST00000444475 STEAP1BQ6NZ63 245 aa3.36□□□□□ -1.87
UBR3-206ENST00000444475 Q71RC1 249 aaPredicted RBP3.36□□□□□ -1.87
UBR3-206ENST00000444475 ASRGL1Q7L266 308 aa3.36□□□□□ -1.87
UBR3-206ENST00000444475 ZADH2Q8N4Q0 377 aa3.36□□□□□ -1.87
UBR3-206ENST00000444475 TMEM86BQ8N661 226 aa3.36□□□□□ -1.87
UBR3-206ENST00000444475 OR10G9Q8NGN4 311 aa3.36□□□□□ -1.87
UBR3-206ENST00000444475 OR4S2Q8NH73 311 aa3.36□□□□□ -1.87
UBR3-206ENST00000444475 C8orf46Q8TAG6 207 aa3.36□□□□□ -1.87
UBR3-206ENST00000444475 HMGCLL1Q8TB92 370 aa3.36□□□□□ -1.87
UBR3-206ENST00000444475 THAP6Q8TBB0 222 aa3.36□□□□□ -1.87
UBR3-206ENST00000444475 CCDC107Q8WV48 283 aa3.36□□□□□ -1.87
UBR3-206ENST00000444475 ADTRPQ96IZ2 230 aa3.36□□□□□ -1.87
UBR3-206ENST00000444475 COL21A1Q96P44 957 aa3.36□□□□□ -1.87
UBR3-206ENST00000444475 CPXM1Q96SM3 734 aa3.36□□□□□ -1.87
UBR3-206ENST00000444475 RASL11BQ9BPW5 248 aa3.36□□□□□ -1.87
UBR3-206ENST00000444475 FNDC4Q9H6D8 234 aaPredicted RBP3.36□□□□□ -1.87
UBR3-206ENST00000444475 SEC14L4Q9UDX3 406 aa3.36□□□□□ -1.87
UBR3-206ENST00000444475 OR12D3Q9UGF7 316 aa3.36□□□□□ -1.87
UBR3-206ENST00000444475 TESQ9UGI8 421 aaKnown RBP3.36□□□□□ -1.87
UBR3-206ENST00000444475 COLEC10Q9Y6Z7 277 aa3.36□□□□□ -1.87
UBR3-206ENST00000444475 CLIP1P30622 1438 aa3.36□□□□□ -1.87
UBR3-206ENST00000444475 PLPP1O14494 284 aa3.36□□□□□ -1.87
UBR3-206ENST00000444475 PRKNO60260 465 aaPredicted RBP3.36□□□□□ -1.87
UBR3-206ENST00000444475 GPR137BO60478 399 aa3.36□□□□□ -1.87
UBR3-206ENST00000444475 IFNA1P01562 189 aa3.36□□□□□ -1.87
UBR3-206ENST00000444475 S100A8P05109 93 aa3.36□□□□□ -1.87
UBR3-206ENST00000444475 ACP2P11117 423 aa3.36□□□□□ -1.87
UBR3-206ENST00000444475 SDC4P31431 198 aa3.36□□□□□ -1.87
UBR3-206ENST00000444475 AVPR1BP47901 424 aa3.36□□□□□ -1.87
UBR3-206ENST00000444475 DNLZQ5SXM8 178 aa3.36□□□□□ -1.87
UBR3-206ENST00000444475 KCTD16Q68DU8 428 aa3.36□□□□□ -1.87
UBR3-206ENST00000444475 SFXN4Q6P4A7 337 aa3.36□□□□□ -1.87
UBR3-206ENST00000444475 CBLN2Q8IUK8 224 aa3.36□□□□□ -1.87
UBR3-206ENST00000444475 EIF4E3Q8N5X7 224 aaKnown RBP3.36□□□□□ -1.87
UBR3-206ENST00000444475 RCHY1Q96PM5 261 aa3.36□□□□□ -1.87
UBR3-206ENST00000444475 ARHGDIGQ99819 225 aa3.36□□□□□ -1.87
UBR3-206ENST00000444475 OSBPL11Q9BXB4 747 aa3.36□□□□□ -1.87
UBR3-206ENST00000444475 MAP1LC3AQ9H492 121 aa3.36□□□□□ -1.87
UBR3-206ENST00000444475 AKTIPQ9H8T0 292 aa3.36□□□□□ -1.87
UBR3-206ENST00000444475 ZNF319Q9P2F9 582 aa3.36□□□□□ -1.87
UBR3-206ENST00000444475 SPIN1Q9Y657 262 aaPredicted RBP3.36□□□□□ -1.87
UBR3-206ENST00000444475 CDC42BPAQ5VT25 1732 aa3.36□□□□□ -1.87
UBR3-206ENST00000444475 NALCNQ8IZF0 1738 aa3.36□□□□□ -1.87
UBR3-206ENST00000444475 RRBP1Q9P2E9 1410 aaKnown RBP3.36□□□□□ -1.87
UBR3-206ENST00000444475 A0A087WX48 190 aa3.35□□□□□ -1.87
UBR3-206ENST00000444475 TSPAN11A1L157 253 aa3.35□□□□□ -1.87
UBR3-206ENST00000444475 EFCAB9A8MZ26 197 aa3.35□□□□□ -1.87
UBR3-206ENST00000444475 K7EMT4 169 aa3.35□□□□□ -1.87
UBR3-206ENST00000444475 CLIC1O00299 241 aa3.35□□□□□ -1.87
UBR3-206ENST00000444475 PHF1O43189 567 aaPredicted RBP3.35□□□□□ -1.87
UBR3-206ENST00000444475 CXCL13O43927 109 aa3.35□□□□□ -1.87
UBR3-206ENST00000444475 CNMDO75829 334 aa3.35□□□□□ -1.87
UBR3-206ENST00000444475 GPANK1O95872 356 aa3.35□□□□□ -1.87
UBR3-206ENST00000444475 TFPIP10646 304 aa3.35□□□□□ -1.87
UBR3-206ENST00000444475 CD58P19256 250 aa3.35□□□□□ -1.87
UBR3-206ENST00000444475 SFTPDP35247 375 aa3.35□□□□□ -1.87
UBR3-206ENST00000444475 GSK3BP49841 420 aa3.35□□□□□ -1.87
UBR3-206ENST00000444475 UBE2E1P51965 193 aa3.35□□□□□ -1.87
UBR3-206ENST00000444475 HCCSP53701 268 aa3.35□□□□□ -1.87
UBR3-206ENST00000444475 EMX2Q04743 252 aa3.35□□□□□ -1.87
UBR3-206ENST00000444475 PLA2G7Q13093 441 aa3.35□□□□□ -1.87
UBR3-206ENST00000444475 CARD16Q5EG05 197 aa3.35□□□□□ -1.87
UBR3-206ENST00000444475 FAM120AOSQ5T036 256 aa3.35□□□□□ -1.87
UBR3-206ENST00000444475 EPGNQ6UW88 154 aa3.35□□□□□ -1.87
UBR3-206ENST00000444475 BCDIN3DQ7Z5W3 292 aaKnown RBP3.35□□□□□ -1.87
UBR3-206ENST00000444475 CATSPER3Q86XQ3 398 aa3.35□□□□□ -1.87
UBR3-206ENST00000444475 C15orf54Q8N8G6 183 aa3.35□□□□□ -1.87
UBR3-206ENST00000444475 ST6GALNAC3Q8NDV1 305 aa3.35□□□□□ -1.87
UBR3-206ENST00000444475 OR5AR1Q8NGP9 310 aa3.35□□□□□ -1.87
UBR3-206ENST00000444475 GPR148Q8TDV2 347 aa3.35□□□□□ -1.87
UBR3-206ENST00000444475 EEF1AKMT1Q8WVE0 214 aa3.35□□□□□ -1.87
UBR3-206ENST00000444475 ACOT12Q8WYK0 555 aa3.35□□□□□ -1.87
UBR3-206ENST00000444475 APOBEC3DQ96AK3 386 aaPredicted RBP3.35□□□□□ -1.87
UBR3-206ENST00000444475 ACDQ96AP0 544 aa3.35□□□□□ -1.87
UBR3-206ENST00000444475 TMEM125Q96AQ2 219 aa3.35□□□□□ -1.87
UBR3-206ENST00000444475 UBE2E2Q96LR5 201 aa3.35□□□□□ -1.87
UBR3-206ENST00000444475 MED18Q9BUE0 208 aa3.35□□□□□ -1.87
UBR3-206ENST00000444475 NUDT9Q9BW91 350 aa3.35□□□□□ -1.87
UBR3-206ENST00000444475 PPP4R1LQ9P1A2 415 aa3.35□□□□□ -1.87
UBR3-206ENST00000444475 VPS29Q9UBQ0 182 aa3.35□□□□□ -1.87
UBR3-206ENST00000444475 WIPI2Q9Y4P8 454 aa3.35□□□□□ -1.87
UBR3-206ENST00000444475 SEC14L6B5MCN3 397 aa3.35□□□□□ -1.87
UBR3-206ENST00000444475 J3KR12 359 aa3.35□□□□□ -1.87
UBR3-206ENST00000444475 PHYHO14832 338 aa3.35□□□□□ -1.87
UBR3-206ENST00000444475 HOXD4P09016 255 aaPredicted RBP3.35□□□□□ -1.87
UBR3-206ENST00000444475 PSMB1P20618 241 aaKnown RBP3.35□□□□□ -1.87
UBR3-206ENST00000444475 CFPP27918 469 aa3.35□□□□□ -1.87
UBR3-206ENST00000444475 RPS9P46781 194 aaKnown RBP3.35□□□□□ -1.87
UBR3-206ENST00000444475 TFPI2P48307 235 aa3.35□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms