RNA–Protein interactions for RNA: ENST00000442842.5

TM9SF4-204, Transcript of transmembrane 9 superfamily member 4, humanhuman

TSL 4

Gene TM9SF4, Length 563 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4-204ENST00000442842 NUFIP1Q9UHK0 495 aaKnown RBP11.66□□□□□ -0.54
TM9SF4-204ENST00000442842 PNMA8CA0A1B0GUJ8 204 aa11.65□□□□□ -0.54
TM9SF4-204ENST00000442842 J3QW42 95 aa11.65□□□□□ -0.54
TM9SF4-204ENST00000442842 P2RY10O00398 339 aa11.65□□□□□ -0.54
TM9SF4-204ENST00000442842 XRCC2O43543 280 aa11.65□□□□□ -0.54
TM9SF4-204ENST00000442842 CLPTM1O96005 669 aa11.65□□□□□ -0.54
TM9SF4-204ENST00000442842 LALBAP00709 142 aa11.65□□□□□ -0.54
TM9SF4-204ENST00000442842 PRF1P14222 555 aa11.65□□□□□ -0.54
TM9SF4-204ENST00000442842 KIR3DL2P43630 455 aa11.65□□□□□ -0.54
TM9SF4-204ENST00000442842 MMP16P51512 607 aa11.65□□□□□ -0.54
TM9SF4-204ENST00000442842 GTF2A1P52655 376 aaPredicted RBP11.65□□□□□ -0.54
TM9SF4-204ENST00000442842 KLF3P57682 345 aaPredicted RBP11.65□□□□□ -0.54
TM9SF4-204ENST00000442842 NANOS3P60323 173 aaKnown RBP11.65□□□□□ -0.54
TM9SF4-204ENST00000442842 ZNF92Q03936 586 aa11.65□□□□□ -0.54
TM9SF4-204ENST00000442842 IRF3Q14653 427 aa11.65□□□□□ -0.54
TM9SF4-204ENST00000442842 ZNF718Q3SXZ3 478 aa11.65□□□□□ -0.54
TM9SF4-204ENST00000442842 XAF1Q6GPH4 301 aa11.65□□□□□ -0.54
TM9SF4-204ENST00000442842 PGAP1Q75T13 922 aa11.65□□□□□ -0.54
TM9SF4-204ENST00000442842 OR5AS1Q8N127 324 aa11.65□□□□□ -0.54
TM9SF4-204ENST00000442842 MUC15Q8N387 334 aa11.65□□□□□ -0.54
TM9SF4-204ENST00000442842 PRSS35Q8N3Z0 413 aa11.65□□□□□ -0.54
TM9SF4-204ENST00000442842 SVOPQ8N4V2 548 aa11.65□□□□□ -0.54
TM9SF4-204ENST00000442842 OR51E1Q8TCB6 317 aa11.65□□□□□ -0.54
TM9SF4-204ENST00000442842 KLF14Q8TD94 323 aaPredicted RBP11.65□□□□□ -0.54
TM9SF4-204ENST00000442842 MRPL24Q96A35 216 aaKnown RBP11.65□□□□□ -0.54
TM9SF4-204ENST00000442842 MARS2Q96GW9 593 aaKnown RBP11.65□□□□□ -0.54
TM9SF4-204ENST00000442842 FAM71F1Q96KD3 344 aaPredicted RBP11.65□□□□□ -0.54
TM9SF4-204ENST00000442842 OR5M11Q96RB7 305 aa11.65□□□□□ -0.54
TM9SF4-204ENST00000442842 PLK3Q9H4B4 646 aa11.65□□□□□ -0.54
TM9SF4-204ENST00000442842 G6PC2Q9NQR9 355 aa11.65□□□□□ -0.54
TM9SF4-204ENST00000442842 BABAM2Q9NXR7 383 aa11.65□□□□□ -0.54
TM9SF4-204ENST00000442842 MYEF2Q9P2K5 600 aaKnown RBP11.65□□□□□ -0.54
TM9SF4-204ENST00000442842 VSTM5A8MXK1 200 aa11.64□□□□□ -0.55
TM9SF4-204ENST00000442842 TIMM8AO60220 97 aaPredicted RBP11.64□□□□□ -0.55
TM9SF4-204ENST00000442842 TTRP02766 147 aa11.64□□□□□ -0.55
TM9SF4-204ENST00000442842 HSMCR30P0CW71 290 aa11.64□□□□□ -0.55
TM9SF4-204ENST00000442842 APOBEC3AP31941 199 aaPredicted RBP11.64□□□□□ -0.55
TM9SF4-204ENST00000442842 SERPINF1P36955 418 aa11.64□□□□□ -0.55
TM9SF4-204ENST00000442842 SELENOVP59797 346 aa11.64□□□□□ -0.55
TM9SF4-204ENST00000442842 MRPL28Q13084 256 aaKnown RBP11.64□□□□□ -0.55
TM9SF4-204ENST00000442842 ALKBH1Q13686 389 aaKnown RBP11.64□□□□□ -0.55
TM9SF4-204ENST00000442842 DOC2BQ14184 412 aa11.64□□□□□ -0.55
TM9SF4-204ENST00000442842 GK2Q14410 553 aaPredicted RBP11.64□□□□□ -0.55
TM9SF4-204ENST00000442842 TBCEQ15813 527 aaPredicted RBP11.64□□□□□ -0.55
TM9SF4-204ENST00000442842 NKPD1Q17RQ9 610 aa11.64□□□□□ -0.55
TM9SF4-204ENST00000442842 RNLSQ5VYX0 342 aa11.64□□□□□ -0.55
TM9SF4-204ENST00000442842 OR2T2Q6IF00 324 aa11.64□□□□□ -0.55
TM9SF4-204ENST00000442842 ZNF773Q6PK81 442 aa11.64□□□□□ -0.55
TM9SF4-204ENST00000442842 C1orf174Q8IYL3 243 aa11.64□□□□□ -0.55
TM9SF4-204ENST00000442842 ZNF676Q8N7Q3 588 aa11.64□□□□□ -0.55
TM9SF4-204ENST00000442842 BHLHE23Q8NDY6 225 aa11.64□□□□□ -0.55
TM9SF4-204ENST00000442842 OR2G2Q8NGZ5 317 aa11.64□□□□□ -0.55
TM9SF4-204ENST00000442842 SGK3Q96BR1 496 aa11.64□□□□□ -0.55
TM9SF4-204ENST00000442842 CMBLQ96DG6 245 aa11.64□□□□□ -0.55
TM9SF4-204ENST00000442842 LYZL4Q96KX0 146 aa11.64□□□□□ -0.55
TM9SF4-204ENST00000442842 SOX7Q9BT81 388 aa11.64□□□□□ -0.55
TM9SF4-204ENST00000442842 GPR84Q9NQS5 396 aa11.64□□□□□ -0.55
TM9SF4-204ENST00000442842 FAIMQ9NVQ4 179 aa11.64□□□□□ -0.55
TM9SF4-204ENST00000442842 FRRS1LQ9P0K9 344 aa11.64□□□□□ -0.55
TM9SF4-204ENST00000442842 ANKHD1Q8IWZ3 2542 aaKnown RBP11.63□□□□□ -0.55
TM9SF4-204ENST00000442842 TRBV2A0A0J9YWF9 115 aa11.63□□□□□ -0.55
TM9SF4-204ENST00000442842 A0A1B0GVI7 797 aa11.63□□□□□ -0.55
TM9SF4-204ENST00000442842 LOC107986453A0A1B0GWG9 222 aa11.63□□□□□ -0.55
TM9SF4-204ENST00000442842 GGT3PA6NGU5 568 aa11.63□□□□□ -0.55
TM9SF4-204ENST00000442842 ACOD1A6NK06 481 aa11.63□□□□□ -0.55
TM9SF4-204ENST00000442842 H3BSA7 217 aa11.63□□□□□ -0.55
TM9SF4-204ENST00000442842 UBCP0CG48 685 aaKnown RBP11.63□□□□□ -0.55
TM9SF4-204ENST00000442842 TTKP33981 857 aa11.63□□□□□ -0.55
TM9SF4-204ENST00000442842 ALDH3B1P43353 468 aa11.63□□□□□ -0.55
TM9SF4-204ENST00000442842 KRTAP10-9P60411 292 aa11.63□□□□□ -0.55
TM9SF4-204ENST00000442842 SNRPD2P62316 118 aaKnown RBP11.63□□□□□ -0.55
TM9SF4-204ENST00000442842 SLC3A1Q07837 685 aa11.63□□□□□ -0.55
TM9SF4-204ENST00000442842 PSG7Q13046 419 aa11.63□□□□□ -0.55
TM9SF4-204ENST00000442842 CDK5R1Q15078 307 aa11.63□□□□□ -0.55
TM9SF4-204ENST00000442842 SPHARQ15513 63 aa11.63□□□□□ -0.55
TM9SF4-204ENST00000442842 TMEM255AQ5JRV8 349 aa11.63□□□□□ -0.55
TM9SF4-204ENST00000442842 MBNL2Q5VZF2 373 aaKnown RBP11.63□□□□□ -0.55
TM9SF4-204ENST00000442842 FBXW12Q6X9E4 464 aa11.63□□□□□ -0.55
TM9SF4-204ENST00000442842 ZNF367Q7RTV3 350 aa11.63□□□□□ -0.55
TM9SF4-204ENST00000442842 ELMOD2Q8IZ81 293 aa11.63□□□□□ -0.55
TM9SF4-204ENST00000442842 SPARTQ8N0X7 666 aa11.63□□□□□ -0.55
TM9SF4-204ENST00000442842 ZNF611Q8N823 705 aa11.63□□□□□ -0.55
TM9SF4-204ENST00000442842 TSPAN14Q8NG11 270 aa11.63□□□□□ -0.55
TM9SF4-204ENST00000442842 HAVCR2Q8TDQ0 301 aa11.63□□□□□ -0.55
TM9SF4-204ENST00000442842 NRGNQ92686 78 aa11.63□□□□□ -0.55
TM9SF4-204ENST00000442842 RNF166Q96A37 237 aaPredicted RBP11.63□□□□□ -0.55
TM9SF4-204ENST00000442842 OPA3Q9H6K4 179 aa11.63□□□□□ -0.55
TM9SF4-204ENST00000442842 PLEKHF2Q9H8W4 249 aa11.63□□□□□ -0.55
TM9SF4-204ENST00000442842 DYNLRB1Q9NP97 96 aa11.63□□□□□ -0.55
TM9SF4-204ENST00000442842 ACOT13Q9NPJ3 140 aa11.63□□□□□ -0.55
TM9SF4-204ENST00000442842 TAAR3PQ9P1P4 343 aa11.63□□□□□ -0.55
TM9SF4-204ENST00000442842 ST6GALNAC2Q9UJ37 374 aa11.63□□□□□ -0.55
TM9SF4-204ENST00000442842 LAMP3Q9UQV4 416 aa11.63□□□□□ -0.55
TM9SF4-204ENST00000442842 LSM2Q9Y333 95 aaKnown RBP11.63□□□□□ -0.55
TM9SF4-204ENST00000442842 NBPF19A0A087WUL8 3843 aa11.62□□□□□ -0.55
TM9SF4-204ENST00000442842 hCG_38984A0A1B0GV85 526 aa11.62□□□□□ -0.55
TM9SF4-204ENST00000442842 SYT7O43581 403 aa11.62□□□□□ -0.55
TM9SF4-204ENST00000442842 MRPS14O60783 128 aaKnown RBP11.62□□□□□ -0.55
TM9SF4-204ENST00000442842 SOD3P08294 240 aa11.62□□□□□ -0.55
TM9SF4-204ENST00000442842 ATP6V1B1P15313 513 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms