RNA–Protein interactions for RNA: ENST00000441222.7

USP46-201, Transcript of ubiquitin specific peptidase 46, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP46, Length 7,954 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-201ENST00000441222 NME2P1O60361 137 aa6.08□□□□□ -1.44
USP46-201ENST00000441222 CD37P11049 281 aa6.08□□□□□ -1.44
USP46-201ENST00000441222 TNFRSF1AP19438 455 aa6.08□□□□□ -1.44
USP46-201ENST00000441222 SPCS3P61009 180 aa6.08□□□□□ -1.44
USP46-201ENST00000441222 PJVKQ0ZLH3 352 aa6.08□□□□□ -1.44
USP46-201ENST00000441222 OXA1LQ15070 435 aa6.08□□□□□ -1.44
USP46-201ENST00000441222 TRMT12Q53H54 448 aaKnown RBP6.08□□□□□ -1.44
USP46-201ENST00000441222 SOWAHCQ53LP3 525 aaPredicted RBP6.08□□□□□ -1.44
USP46-201ENST00000441222 SYT14P1Q58G82 188 aa6.08□□□□□ -1.44
USP46-201ENST00000441222 ZNF511Q8NB15 262 aa6.08□□□□□ -1.44
USP46-201ENST00000441222 ATOH1Q92858 354 aaPredicted RBP6.08□□□□□ -1.44
USP46-201ENST00000441222 CHST6Q9GZX3 395 aa6.08□□□□□ -1.44
USP46-201ENST00000441222 BANF2Q9H503 90 aa6.08□□□□□ -1.44
USP46-201ENST00000441222 ZNF785A8K8V0 405 aa6.08□□□□□ -1.44
USP46-201ENST00000441222 RAB27BO00194 218 aa6.08□□□□□ -1.44
USP46-201ENST00000441222 PGA3P0DJD8 388 aa6.08□□□□□ -1.44
USP46-201ENST00000441222 KIR2DS2P43631 304 aa6.08□□□□□ -1.44
USP46-201ENST00000441222 MEOX1P50221 254 aa6.08□□□□□ -1.44
USP46-201ENST00000441222 LIM2P55344 173 aa6.08□□□□□ -1.44
USP46-201ENST00000441222 CLDN15P56746 228 aa6.08□□□□□ -1.44
USP46-201ENST00000441222 TRIM61Q5EBN2 209 aa6.08□□□□□ -1.44
USP46-201ENST00000441222 B3GNTL1Q67FW5 361 aaPredicted RBP6.08□□□□□ -1.44
USP46-201ENST00000441222 UBAC2Q8NBM4 344 aa6.08□□□□□ -1.44
USP46-201ENST00000441222 BHLHE23Q8NDY6 225 aa6.08□□□□□ -1.44
USP46-201ENST00000441222 ARRDC3Q96B67 414 aa6.08□□□□□ -1.44
USP46-201ENST00000441222 SLCO4A1Q96BD0 722 aa6.08□□□□□ -1.44
USP46-201ENST00000441222 LOC107986453A0A1B0GWG9 222 aa6.08□□□□□ -1.44
USP46-201ENST00000441222 C5orf49A4QMS7 147 aa6.08□□□□□ -1.44
USP46-201ENST00000441222 MYADML2A6NDP7 307 aa6.08□□□□□ -1.44
USP46-201ENST00000441222 TOX3O15405 576 aaPredicted RBP6.08□□□□□ -1.44
USP46-201ENST00000441222 ZNF354AO60765 605 aaPredicted RBP6.08□□□□□ -1.44
USP46-201ENST00000441222 AKR7A3O95154 331 aa6.08□□□□□ -1.44
USP46-201ENST00000441222 FGF7P21781 194 aa6.08□□□□□ -1.44
USP46-201ENST00000441222 PXNP49023 591 aaPredicted RBP6.08□□□□□ -1.44
USP46-201ENST00000441222 SMAGPQ0VAQ4 97 aa6.08□□□□□ -1.44
USP46-201ENST00000441222 TP53INP2Q8IXH6 220 aa6.08□□□□□ -1.44
USP46-201ENST00000441222 FBXO4Q9UKT5 387 aa6.08□□□□□ -1.44
USP46-201ENST00000441222 HRH3Q9Y5N1 445 aa6.08□□□□□ -1.44
USP46-201ENST00000441222 R4GMQ9 66 aa6.08□□□□□ -1.44
USP46-201ENST00000441222 CEP290O15078 2479 aa6.08□□□□□ -1.44
USP46-201ENST00000441222 ICMTO60725 284 aa6.08□□□□□ -1.44
USP46-201ENST00000441222 CD80P33681 288 aa6.08□□□□□ -1.44
USP46-201ENST00000441222 SHBQ15464 509 aa6.08□□□□□ -1.44
USP46-201ENST00000441222 SAXO2Q658L1 398 aa6.08□□□□□ -1.44
USP46-201ENST00000441222 MARCH3Q86UD3 253 aa6.08□□□□□ -1.44
USP46-201ENST00000441222 C11orf42Q8N5U0 333 aa6.08□□□□□ -1.44
USP46-201ENST00000441222 MOB3AQ96BX8 217 aa6.08□□□□□ -1.44
USP46-201ENST00000441222 GRAMD2BQ96HH9 432 aa6.08□□□□□ -1.44
USP46-201ENST00000441222 SDF2Q99470 211 aa6.08□□□□□ -1.44
USP46-201ENST00000441222 CDCA4Q9BXL8 241 aa6.08□□□□□ -1.44
USP46-201ENST00000441222 HAPLN2Q9GZV7 340 aa6.08□□□□□ -1.44
USP46-201ENST00000441222 C19orf53Q9UNZ5 99 aaPredicted RBP6.08□□□□□ -1.44
USP46-201ENST00000441222 LSM2Q9Y333 95 aaKnown RBP6.08□□□□□ -1.44
USP46-201ENST00000441222 ZNF320A2RRD8 509 aa6.08□□□□□ -1.44
USP46-201ENST00000441222 FUT6P51993 359 aa6.08□□□□□ -1.44
USP46-201ENST00000441222 SUMO3P55854 103 aaPredicted RBP6.08□□□□□ -1.44
USP46-201ENST00000441222 PIGPP57054 158 aa6.08□□□□□ -1.44
USP46-201ENST00000441222 UBE2MP61081 183 aaKnown RBP6.08□□□□□ -1.44
USP46-201ENST00000441222 HYAL4Q2M3T9 481 aa6.08□□□□□ -1.44
USP46-201ENST00000441222 COL13A1Q5TAT6 717 aaPredicted RBP6.08□□□□□ -1.44
USP46-201ENST00000441222 UBE3DQ7Z6J8 389 aa6.08□□□□□ -1.44
USP46-201ENST00000441222 GALNT16Q8N428 558 aa6.08□□□□□ -1.44
USP46-201ENST00000441222 ARRDC2Q8TBH0 407 aa6.08□□□□□ -1.44
USP46-201ENST00000441222 GPR119Q8TDV5 335 aa6.08□□□□□ -1.44
USP46-201ENST00000441222 C20orf24Q9BUV8 137 aa6.08□□□□□ -1.44
USP46-201ENST00000441222 SUCNR1Q9BXA5 334 aa6.08□□□□□ -1.44
USP46-201ENST00000441222 TAS2R4Q9NYW5 299 aa6.08□□□□□ -1.44
USP46-201ENST00000441222 M0R082 166 aa6.07□□□□□ -1.44
USP46-201ENST00000441222 OR2J3O76001 311 aa6.07□□□□□ -1.44
USP46-201ENST00000441222 NXPH3O95157 252 aa6.07□□□□□ -1.44
USP46-201ENST00000441222 SLC25A4P12235 298 aa6.07□□□□□ -1.44
USP46-201ENST00000441222 PTGER1P34995 402 aa6.07□□□□□ -1.44
USP46-201ENST00000441222 MOGAT2Q3SYC2 334 aa6.07□□□□□ -1.44
USP46-201ENST00000441222 VMA21Q3ZAQ7 101 aa6.07□□□□□ -1.44
USP46-201ENST00000441222 FAM71E1Q6IPT2 247 aa6.07□□□□□ -1.44
USP46-201ENST00000441222 PTCRAQ6ISU1 281 aaPredicted RBP6.07□□□□□ -1.44
USP46-201ENST00000441222 RLN3Q8WXF3 142 aa6.07□□□□□ -1.44
USP46-201ENST00000441222 ELSPBP1Q96BH3 223 aa6.07□□□□□ -1.44
USP46-201ENST00000441222 C19orf43Q9BQ61 176 aa6.07□□□□□ -1.44
USP46-201ENST00000441222 DHCR7Q9UBM7 475 aaKnown RBP6.07□□□□□ -1.44
USP46-201ENST00000441222 CGGBP1Q9UFW8 167 aaPredicted RBP6.07□□□□□ -1.44
USP46-201ENST00000441222 ZNF835Q9Y2P0 537 aa6.07□□□□□ -1.44
USP46-201ENST00000441222 AMMECR1Q9Y4X0 333 aaPredicted RBP6.07□□□□□ -1.44
USP46-201ENST00000441222 NUMBLQ9Y6R0 609 aa6.07□□□□□ -1.44
USP46-201ENST00000441222 POLEQ07864 2286 aa6.07□□□□□ -1.44
USP46-201ENST00000441222 CACNA1IQ9P0X4 2223 aa6.07□□□□□ -1.44
USP46-201ENST00000441222 CRYBG1Q9Y4K1 1723 aa6.07□□□□□ -1.44
USP46-201ENST00000441222 LRP3O75074 770 aa6.07□□□□□ -1.44
USP46-201ENST00000441222 PIAS2O75928 621 aa6.07□□□□□ -1.44
USP46-201ENST00000441222 P2RX3P56373 397 aa6.07□□□□□ -1.44
USP46-201ENST00000441222 PFN3P60673 137 aa6.07□□□□□ -1.44
USP46-201ENST00000441222 FAM53BQ14153 422 aa6.07□□□□□ -1.44
USP46-201ENST00000441222 TOMM34Q15785 309 aaPredicted RBP6.07□□□□□ -1.44
USP46-201ENST00000441222 PLAC9Q5JTB6 97 aa6.07□□□□□ -1.44
USP46-201ENST00000441222 COX20Q5RI15 118 aa6.07□□□□□ -1.44
USP46-201ENST00000441222 ZNF574Q6ZN55 896 aaPredicted RBP6.07□□□□□ -1.44
USP46-201ENST00000441222 TMPRSS11FQ6ZWK6 438 aa6.07□□□□□ -1.44
USP46-201ENST00000441222 CALHM3Q86XJ0 350 aa6.07□□□□□ -1.44
USP46-201ENST00000441222 SLC37A2Q8TED4 501 aa6.07□□□□□ -1.44
USP46-201ENST00000441222 GPR78Q96P69 363 aa6.07□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms