RNA–Protein interactions for RNA: ENST00000440903.1

CCDC140-202, Transcript of coiled-coil domain containing 140, humanhuman

APPRIS ALT2 TSL 3

Gene CCDC140, Length 441 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC140-202ENST00000440903 C4orf45Q96LM5 186 aa4.31□□□□□ -1.72
CCDC140-202ENST00000440903 CDCA4Q9BXL8 241 aa4.31□□□□□ -1.72
CCDC140-202ENST00000440903 MRPS26Q9BYN8 205 aaKnown RBP4.31□□□□□ -1.72
CCDC140-202ENST00000440903 OR51B6Q9H340 312 aa4.31□□□□□ -1.72
CCDC140-202ENST00000440903 DUSP21Q9H596 190 aa4.31□□□□□ -1.72
CCDC140-202ENST00000440903 ZNF442Q9H7R0 627 aa4.31□□□□□ -1.72
CCDC140-202ENST00000440903 ZNF696Q9H7X3 374 aa4.31□□□□□ -1.72
CCDC140-202ENST00000440903 ABCB9Q9NP78 766 aa4.31□□□□□ -1.72
CCDC140-202ENST00000440903 ACOXLQ9NUZ1 547 aa4.31□□□□□ -1.72
CCDC140-202ENST00000440903 TBCCD1Q9NVR7 557 aa4.31□□□□□ -1.72
CCDC140-202ENST00000440903 B3GNT2Q9NY97 397 aa4.31□□□□□ -1.72
CCDC140-202ENST00000440903 SLCO1C1Q9NYB5 712 aa4.31□□□□□ -1.72
CCDC140-202ENST00000440903 ZNF224Q9NZL3 707 aa4.31□□□□□ -1.72
CCDC140-202ENST00000440903 NPAP1Q9NZP6 1156 aa4.31□□□□□ -1.72
CCDC140-202ENST00000440903 PLEKHB1Q9UF11 243 aaPredicted RBP4.31□□□□□ -1.72
CCDC140-202ENST00000440903 SCOCQ9UIL1 159 aa4.31□□□□□ -1.72
CCDC140-202ENST00000440903 COPS3Q9UNS2 423 aa4.31□□□□□ -1.72
CCDC140-202ENST00000440903 KLHDC2Q9Y2U9 406 aa4.31□□□□□ -1.72
CCDC140-202ENST00000440903 CMAHPQ9Y471 501 aa4.31□□□□□ -1.72
CCDC140-202ENST00000440903 N6AMT1Q9Y5N5 214 aa4.31□□□□□ -1.72
CCDC140-202ENST00000440903 NCOA6Q14686 2063 aaPredicted RBP4.31□□□□□ -1.72
CCDC140-202ENST00000440903 KALRNO60229 2985 aa4.31□□□□□ -1.72
CCDC140-202ENST00000440903 CFAP46Q8IYW2 2715 aa4.3□□□□□ -1.72
CCDC140-202ENST00000440903 INTS1Q8N201 2190 aaKnown RBP4.3□□□□□ -1.72
CCDC140-202ENST00000440903 NBASA2RRP1 2371 aa4.3□□□□□ -1.72
CCDC140-202ENST00000440903 TRBV2A0A0J9YWF9 115 aa4.3□□□□□ -1.72
CCDC140-202ENST00000440903 CLEC18AA5D8T8 446 aa4.3□□□□□ -1.72
CCDC140-202ENST00000440903 ZNF503-AS2A6NEH8 195 aa4.3□□□□□ -1.72
CCDC140-202ENST00000440903 GGT3PA6NGU5 568 aa4.3□□□□□ -1.72
CCDC140-202ENST00000440903 ANXA2P2A6NMY6 339 aa4.3□□□□□ -1.72
CCDC140-202ENST00000440903 ANKRD30BLA7E2S9 258 aa4.3□□□□□ -1.72
CCDC140-202ENST00000440903 KRTAP9-7A8MTY7 169 aa4.3□□□□□ -1.72
CCDC140-202ENST00000440903 C19orf84I3L1E1 186 aa4.3□□□□□ -1.72
CCDC140-202ENST00000440903 PSMD9O00233 223 aa4.3□□□□□ -1.72
CCDC140-202ENST00000440903 EREGO14944 169 aa4.3□□□□□ -1.72
CCDC140-202ENST00000440903 SYT7O43581 403 aa4.3□□□□□ -1.72
CCDC140-202ENST00000440903 TIMM8AO60220 97 aaPredicted RBP4.3□□□□□ -1.72
CCDC140-202ENST00000440903 ICMTO60725 284 aa4.3□□□□□ -1.72
CCDC140-202ENST00000440903 GATBO75879 557 aaKnown RBP4.3□□□□□ -1.72
CCDC140-202ENST00000440903 SCG5P05408 212 aa4.3□□□□□ -1.72
CCDC140-202ENST00000440903 THBDP07204 575 aa4.3□□□□□ -1.72
CCDC140-202ENST00000440903 CELA3BP08861 270 aa4.3□□□□□ -1.72
CCDC140-202ENST00000440903 ACSM4P0C7M7 580 aa4.3□□□□□ -1.72
CCDC140-202ENST00000440903 CCL2P13500 99 aa4.3□□□□□ -1.72
CCDC140-202ENST00000440903 ATP6V1B1P15313 513 aa4.3□□□□□ -1.72
CCDC140-202ENST00000440903 IGFBP2P18065 325 aa4.3□□□□□ -1.72
CCDC140-202ENST00000440903 EPHA1P21709 976 aa4.3□□□□□ -1.72
CCDC140-202ENST00000440903 ACHEP22303 614 aa4.3□□□□□ -1.72
CCDC140-202ENST00000440903 TNFSF4P23510 183 aa4.3□□□□□ -1.72
CCDC140-202ENST00000440903 OTX1P32242 354 aaPredicted RBP4.3□□□□□ -1.72
CCDC140-202ENST00000440903 GLRXP35754 106 aa4.3□□□□□ -1.72
CCDC140-202ENST00000440903 LIPAP38571 399 aa4.3□□□□□ -1.72
CCDC140-202ENST00000440903 DDOSTP39656 456 aa4.3□□□□□ -1.72
CCDC140-202ENST00000440903 RANBP1P43487 201 aa4.3□□□□□ -1.72
CCDC140-202ENST00000440903 TGM4P49221 684 aa4.3□□□□□ -1.72
CCDC140-202ENST00000440903 CCR9P51686 369 aa4.3□□□□□ -1.72
CCDC140-202ENST00000440903 UCP2P55851 309 aa4.3□□□□□ -1.72
CCDC140-202ENST00000440903 KLF3P57682 345 aaPredicted RBP4.3□□□□□ -1.72
CCDC140-202ENST00000440903 ZNF121P58317 390 aaPredicted RBP4.3□□□□□ -1.72
CCDC140-202ENST00000440903 ZNF85Q03923 595 aa4.3□□□□□ -1.72
CCDC140-202ENST00000440903 TLE4Q04727 773 aa4.3□□□□□ -1.72
CCDC140-202ENST00000440903 MZT1Q08AG7 82 aa4.3□□□□□ -1.72
CCDC140-202ENST00000440903 MLLT11Q13015 90 aaPredicted RBP4.3□□□□□ -1.72
CCDC140-202ENST00000440903 SNTB1Q13884 538 aaKnown RBP4.3□□□□□ -1.72
CCDC140-202ENST00000440903 DAZAP2Q15038 168 aaPredicted RBP4.3□□□□□ -1.72
CCDC140-202ENST00000440903 SPHARQ15513 63 aa4.3□□□□□ -1.72
CCDC140-202ENST00000440903 CDSNQ15517 529 aa4.3□□□□□ -1.72
CCDC140-202ENST00000440903 NEDD8Q15843 81 aa4.3□□□□□ -1.72
CCDC140-202ENST00000440903 TIMM50Q3ZCQ8 353 aa4.3□□□□□ -1.72
CCDC140-202ENST00000440903 AGAP6Q5VW22 663 aa4.3□□□□□ -1.72
CCDC140-202ENST00000440903 LIPNQ5VXI9 398 aa4.3□□□□□ -1.72
CCDC140-202ENST00000440903 RPL22L1Q6P5R6 122 aaKnown RBP4.3□□□□□ -1.72
CCDC140-202ENST00000440903 CLEC18BQ6UXF7 455 aa4.3□□□□□ -1.72
CCDC140-202ENST00000440903 RFPL4BQ6ZWI9 263 aa4.3□□□□□ -1.72
CCDC140-202ENST00000440903 PGAP1Q75T13 922 aa4.3□□□□□ -1.72
CCDC140-202ENST00000440903 DOK3Q7L591 496 aa4.3□□□□□ -1.72
CCDC140-202ENST00000440903 KLBQ86Z14 1044 aa4.3□□□□□ -1.72
CCDC140-202ENST00000440903 RFLNBQ8N5W9 214 aa4.3□□□□□ -1.72
CCDC140-202ENST00000440903 CLEC18CQ8NCF0 446 aa4.3□□□□□ -1.72
CCDC140-202ENST00000440903 CPEB3Q8NE35 698 aaKnown RBP4.3□□□□□ -1.72
CCDC140-202ENST00000440903 CSNK2A3Q8NEV1 391 aa4.3□□□□□ -1.72
CCDC140-202ENST00000440903 KBTBD8Q8NFY9 601 aa4.3□□□□□ -1.72
CCDC140-202ENST00000440903 TSPAN14Q8NG11 270 aa4.3□□□□□ -1.72
CCDC140-202ENST00000440903 OR5AK2Q8NH90 309 aa4.3□□□□□ -1.72
CCDC140-202ENST00000440903 FGFBP3Q8TAT2 258 aa4.3□□□□□ -1.72
CCDC140-202ENST00000440903 SYNPRQ8TBG9 265 aa4.3□□□□□ -1.72
CCDC140-202ENST00000440903 SPRYD4Q8WW59 207 aaPredicted RBP4.3□□□□□ -1.72
CCDC140-202ENST00000440903 SMIM19Q96E16 107 aa4.3□□□□□ -1.72
CCDC140-202ENST00000440903 REEP6Q96HR9 211 aa4.3□□□□□ -1.72
CCDC140-202ENST00000440903 POM121L2Q96KW2 1035 aa4.3□□□□□ -1.72
CCDC140-202ENST00000440903 TECTBQ96PL2 329 aa4.3□□□□□ -1.72
CCDC140-202ENST00000440903 AMELYQ99218 206 aa4.3□□□□□ -1.72
CCDC140-202ENST00000440903 C1QTNF5Q9BXJ0 243 aa4.3□□□□□ -1.72
CCDC140-202ENST00000440903 PBOV1Q9GZY1 135 aa4.3□□□□□ -1.72
CCDC140-202ENST00000440903 SLC22A4Q9H015 551 aa4.3□□□□□ -1.72
CCDC140-202ENST00000440903 SLITRK2Q9H156 845 aa4.3□□□□□ -1.72
CCDC140-202ENST00000440903 CLEC4MQ9H2X3 399 aaPredicted RBP4.3□□□□□ -1.72
CCDC140-202ENST00000440903 PLK3Q9H4B4 646 aa4.3□□□□□ -1.72
CCDC140-202ENST00000440903 UBTD1Q9HAC8 227 aa4.3□□□□□ -1.72
CCDC140-202ENST00000440903 PNRC2Q9NPJ4 139 aaKnown RBP4.3□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms