RNA–Protein interactions for RNA: ENST00000440653.1

HDAC6-209, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 658 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-209ENST00000440653 SLC22A13Q9Y226 551 aa8.08□□□□□ -1.12
HDAC6-209ENST00000440653 FARSAQ9Y285 508 aaKnown RBP8.08□□□□□ -1.12
HDAC6-209ENST00000440653 FLVCR1Q9Y5Y0 555 aa8.08□□□□□ -1.12
HDAC6-209ENST00000440653 PHF3Q92576 2039 aaKnown RBP8.08□□□□□ -1.12
HDAC6-209ENST00000440653 A0A1B0GTH9 108 aa8.07□□□□□ -1.12
HDAC6-209ENST00000440653 H7C417 338 aa8.07□□□□□ -1.12
HDAC6-209ENST00000440653 K7EM74 188 aa8.07□□□□□ -1.12
HDAC6-209ENST00000440653 ATP6V1G1O75348 118 aa8.07□□□□□ -1.12
HDAC6-209ENST00000440653 TGM6O95932 706 aa8.07□□□□□ -1.12
HDAC6-209ENST00000440653 TTRP02766 147 aa8.07□□□□□ -1.12
HDAC6-209ENST00000440653 LPLP06858 475 aa8.07□□□□□ -1.12
HDAC6-209ENST00000440653 QDPRP09417 244 aa8.07□□□□□ -1.12
HDAC6-209ENST00000440653 H2AFB2P0C5Z0 115 aa8.07□□□□□ -1.12
HDAC6-209ENST00000440653 ACSM4P0C7M7 580 aa8.07□□□□□ -1.12
HDAC6-209ENST00000440653 UBBP0CG47 229 aa8.07□□□□□ -1.12
HDAC6-209ENST00000440653 ANXA3P12429 323 aa8.07□□□□□ -1.12
HDAC6-209ENST00000440653 CTSSP25774 331 aa8.07□□□□□ -1.12
HDAC6-209ENST00000440653 CD82P27701 267 aa8.07□□□□□ -1.12
HDAC6-209ENST00000440653 BDKRB2P30411 391 aa8.07□□□□□ -1.12
HDAC6-209ENST00000440653 CYB561P49447 251 aa8.07□□□□□ -1.12
HDAC6-209ENST00000440653 GSK3AP49840 483 aa8.07□□□□□ -1.12
HDAC6-209ENST00000440653 CLDN12P56749 244 aa8.07□□□□□ -1.12
HDAC6-209ENST00000440653 CLDN17P56750 224 aa8.07□□□□□ -1.12
HDAC6-209ENST00000440653 MRPS34P82930 218 aaKnown RBP8.07□□□□□ -1.12
HDAC6-209ENST00000440653 RBMS2Q15434 407 aaKnown RBP8.07□□□□□ -1.12
HDAC6-209ENST00000440653 STK11Q15831 433 aa8.07□□□□□ -1.12
HDAC6-209ENST00000440653 ODF4Q2M2E3 257 aa8.07□□□□□ -1.12
HDAC6-209ENST00000440653 EIF2S3LQ2VIR3 472 aaKnown RBP8.07□□□□□ -1.12
HDAC6-209ENST00000440653 CCDC92Q53HC0 331 aaPredicted RBP8.07□□□□□ -1.12
HDAC6-209ENST00000440653 METTL11BQ5VVY1 283 aa8.07□□□□□ -1.12
HDAC6-209ENST00000440653 LRFN4Q6PJG9 635 aa8.07□□□□□ -1.12
HDAC6-209ENST00000440653 CFAP77Q6ZQR2 320 aa8.07□□□□□ -1.12
HDAC6-209ENST00000440653 CREB3L2Q70SY1 520 aa8.07□□□□□ -1.12
HDAC6-209ENST00000440653 DOK3Q7L591 496 aa8.07□□□□□ -1.12
HDAC6-209ENST00000440653 LUZP2Q86TE4 346 aa8.07□□□□□ -1.12
HDAC6-209ENST00000440653 SERPINA12Q8IW75 414 aa8.07□□□□□ -1.12
HDAC6-209ENST00000440653 TMEM123Q8N131 208 aa8.07□□□□□ -1.12
HDAC6-209ENST00000440653 UBE2J2Q8N2K1 259 aa8.07□□□□□ -1.12
HDAC6-209ENST00000440653 FAM109AQ8N4B1 249 aa8.07□□□□□ -1.12
HDAC6-209ENST00000440653 GALNT11Q8NCW6 608 aa8.07□□□□□ -1.12
HDAC6-209ENST00000440653 DNAAF1Q8NEP3 725 aa8.07□□□□□ -1.12
HDAC6-209ENST00000440653 GJC3Q8NFK1 279 aa8.07□□□□□ -1.12
HDAC6-209ENST00000440653 OR6N1Q8NGY5 312 aa8.07□□□□□ -1.12
HDAC6-209ENST00000440653 OR52I2Q8NH67 350 aa8.07□□□□□ -1.12
HDAC6-209ENST00000440653 CPNE4Q96A23 557 aaPredicted RBP8.07□□□□□ -1.12
HDAC6-209ENST00000440653 C10orf35Q96D05 121 aa8.07□□□□□ -1.12
HDAC6-209ENST00000440653 ORAI1Q96D31 301 aa8.07□□□□□ -1.12
HDAC6-209ENST00000440653 CPNE2Q96FN4 548 aaPredicted RBP8.07□□□□□ -1.12
HDAC6-209ENST00000440653 ABHD17AQ96GS6 310 aa8.07□□□□□ -1.12
HDAC6-209ENST00000440653 SFXN2Q96NB2 322 aa8.07□□□□□ -1.12
HDAC6-209ENST00000440653 EMC6Q9BV81 110 aa8.07□□□□□ -1.12
HDAC6-209ENST00000440653 SPRY4Q9C004 299 aa8.07□□□□□ -1.12
HDAC6-209ENST00000440653 SEC61A2Q9H9S3 476 aa8.07□□□□□ -1.12
HDAC6-209ENST00000440653 PROK2Q9HC23 129 aa8.07□□□□□ -1.12
HDAC6-209ENST00000440653 HRASLSQ9HDD0 168 aa8.07□□□□□ -1.12
HDAC6-209ENST00000440653 TMEM138Q9NPI0 162 aa8.07□□□□□ -1.12
HDAC6-209ENST00000440653 CENPMQ9NSP4 180 aa8.07□□□□□ -1.12
HDAC6-209ENST00000440653 MTFP1Q9UDX5 166 aa8.07□□□□□ -1.12
HDAC6-209ENST00000440653 FBXL3Q9UKT7 428 aa8.07□□□□□ -1.12
HDAC6-209ENST00000440653 N6AMT1Q9Y5N5 214 aa8.07□□□□□ -1.12
HDAC6-209ENST00000440653 A0A0U1RQV5 110 aa8.06□□□□□ -1.12
HDAC6-209ENST00000440653 TMEM272A0A1B0GTI8 110 aa8.06□□□□□ -1.12
HDAC6-209ENST00000440653 CIB4A0PJX0 185 aa8.06□□□□□ -1.12
HDAC6-209ENST00000440653 METTL21EPA6NDL7 271 aa8.06□□□□□ -1.12
HDAC6-209ENST00000440653 LRRC3CA6NJW4 275 aa8.06□□□□□ -1.12
HDAC6-209ENST00000440653 DHRS7CA6NNS2 312 aa8.06□□□□□ -1.12
HDAC6-209ENST00000440653 C9orf172C9J069 976 aa8.06□□□□□ -1.12
HDAC6-209ENST00000440653 EIF1AYO14602 144 aaKnown RBP8.06□□□□□ -1.12
HDAC6-209ENST00000440653 ZIC3O60481 467 aa8.06□□□□□ -1.12
HDAC6-209ENST00000440653 RBBP9O75884 186 aa8.06□□□□□ -1.12
HDAC6-209ENST00000440653 SNAPC5O75971 98 aa8.06□□□□□ -1.12
HDAC6-209ENST00000440653 MPZL1O95297 269 aa8.06□□□□□ -1.12
HDAC6-209ENST00000440653 MT-ND4P03905 459 aa8.06□□□□□ -1.12
HDAC6-209ENST00000440653 AKAIN1P0CW23 69 aa8.06□□□□□ -1.12
HDAC6-209ENST00000440653 RAB3AP20336 220 aa8.06□□□□□ -1.12
HDAC6-209ENST00000440653 PSMB1P20618 241 aaKnown RBP8.06□□□□□ -1.12
HDAC6-209ENST00000440653 ENPP1P22413 925 aa8.06□□□□□ -1.12
HDAC6-209ENST00000440653 GIFP27352 417 aa8.06□□□□□ -1.12
HDAC6-209ENST00000440653 GNALP38405 381 aa8.06□□□□□ -1.12
HDAC6-209ENST00000440653 MAGEB1P43366 347 aa8.06□□□□□ -1.12
HDAC6-209ENST00000440653 CX3CR1P49238 355 aa8.06□□□□□ -1.12
HDAC6-209ENST00000440653 SRP9P49458 86 aaKnown RBP8.06□□□□□ -1.12
HDAC6-209ENST00000440653 MECP2P51608 486 aaKnown RBP8.06□□□□□ -1.12
HDAC6-209ENST00000440653 TAS2R19P59542 299 aa8.06□□□□□ -1.12
HDAC6-209ENST00000440653 CD83Q01151 205 aa8.06□□□□□ -1.12
HDAC6-209ENST00000440653 KLRB1Q12918 225 aa8.06□□□□□ -1.12
HDAC6-209ENST00000440653 ECH1Q13011 328 aa8.06□□□□□ -1.12
HDAC6-209ENST00000440653 CDK10Q15131 360 aa8.06□□□□□ -1.12
HDAC6-209ENST00000440653 INPP5JQ15735 1006 aaPredicted RBP8.06□□□□□ -1.12
HDAC6-209ENST00000440653 RNASE12Q5GAN4 147 aaKnown RBP8.06□□□□□ -1.12
HDAC6-209ENST00000440653 RIPPLY2Q5TAB7 128 aa8.06□□□□□ -1.12
HDAC6-209ENST00000440653 SLC25A25Q6KCM7 469 aa8.06□□□□□ -1.12
HDAC6-209ENST00000440653 ZNF529Q6P280 563 aa8.06□□□□□ -1.12
HDAC6-209ENST00000440653 OR2W3Q7Z3T1 314 aa8.06□□□□□ -1.12
HDAC6-209ENST00000440653 IZUMO1Q8IYV9 350 aa8.06□□□□□ -1.12
HDAC6-209ENST00000440653 GPR137CQ8N3F9 429 aa8.06□□□□□ -1.12
HDAC6-209ENST00000440653 JAGN1Q8N5M9 183 aa8.06□□□□□ -1.12
HDAC6-209ENST00000440653 OR1M1Q8NGA1 313 aa8.06□□□□□ -1.12
HDAC6-209ENST00000440653 OR51D1Q8NGF3 324 aa8.06□□□□□ -1.12
HDAC6-209ENST00000440653 OR5D14Q8NGL3 314 aa8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms