RNA–Protein interactions for RNA: ENST00000440097.5

LIMD1-202, Transcript of LIM domains containing 1, humanhuman

TSL 5 BASIC

Gene LIMD1, Length 2,773 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1-202ENST00000440097 RPA2P15927 270 aa12.58□□□□□ -0.39
LIMD1-202ENST00000440097 ZNF43P17038 809 aa12.58□□□□□ -0.39
LIMD1-202ENST00000440097 MRPS10P82664 201 aaKnown RBP12.58□□□□□ -0.39
LIMD1-202ENST00000440097 RBMS2Q15434 407 aaKnown RBP12.58□□□□□ -0.39
LIMD1-202ENST00000440097 WDR38Q5JTN6 314 aa12.58□□□□□ -0.39
LIMD1-202ENST00000440097 DHRS13Q6UX07 377 aa12.58□□□□□ -0.39
LIMD1-202ENST00000440097 PPP1R32Q7Z5V6 425 aa12.58□□□□□ -0.39
LIMD1-202ENST00000440097 PRSS35Q8N3Z0 413 aa12.58□□□□□ -0.39
LIMD1-202ENST00000440097 BOLLQ8N9W6 283 aaKnown RBP12.58□□□□□ -0.39
LIMD1-202ENST00000440097 OR10H5Q8NGA6 315 aa12.58□□□□□ -0.39
LIMD1-202ENST00000440097 PHYHIPQ92561 330 aa12.58□□□□□ -0.39
LIMD1-202ENST00000440097 SLC25A28Q96A46 364 aa12.58□□□□□ -0.39
LIMD1-202ENST00000440097 ZBTB8AQ96BR9 441 aa12.58□□□□□ -0.39
LIMD1-202ENST00000440097 DCBLD2Q96PD2 775 aa12.58□□□□□ -0.39
LIMD1-202ENST00000440097 KCNK17Q96T54 332 aa12.58□□□□□ -0.39
LIMD1-202ENST00000440097 EDEM2Q9BV94 578 aa12.58□□□□□ -0.39
LIMD1-202ENST00000440097 BARX1Q9HBU1 254 aaPredicted RBP12.58□□□□□ -0.39
LIMD1-202ENST00000440097 RASL12Q9NYN1 266 aa12.58□□□□□ -0.39
LIMD1-202ENST00000440097 DUX4Q9UBX2 424 aa12.58□□□□□ -0.39
LIMD1-202ENST00000440097 SLC22A13Q9Y226 551 aa12.58□□□□□ -0.39
LIMD1-202ENST00000440097 V9GY05 133 aa12.58□□□□□ -0.39
LIMD1-202ENST00000440097 OR4C45A6NMZ5 311 aa12.58□□□□□ -0.4
LIMD1-202ENST00000440097 ANXA2P07355 339 aaKnown RBP12.58□□□□□ -0.4
LIMD1-202ENST00000440097 MLF1P58340 268 aa12.58□□□□□ -0.4
LIMD1-202ENST00000440097 PCGF3Q3KNV8 242 aa12.58□□□□□ -0.4
LIMD1-202ENST00000440097 TMEM88Q6PEY1 159 aa12.58□□□□□ -0.4
LIMD1-202ENST00000440097 TMEM17Q86X19 198 aa12.58□□□□□ -0.4
LIMD1-202ENST00000440097 HIST2H2ABQ8IUE6 130 aaPredicted RBP12.58□□□□□ -0.4
LIMD1-202ENST00000440097 FADS6Q8N9I5 356 aa12.58□□□□□ -0.4
LIMD1-202ENST00000440097 OR4D10Q8NGI6 311 aa12.58□□□□□ -0.4
LIMD1-202ENST00000440097 OR4C16Q8NGL9 310 aa12.58□□□□□ -0.4
LIMD1-202ENST00000440097 SLC25A43Q8WUT9 341 aaPredicted RBP12.58□□□□□ -0.4
LIMD1-202ENST00000440097 PPP1R14AQ96A00 147 aa12.58□□□□□ -0.4
LIMD1-202ENST00000440097 HAVCR1Q96D42 359 aa12.58□□□□□ -0.4
LIMD1-202ENST00000440097 ZPBPQ9BS86 351 aa12.58□□□□□ -0.4
LIMD1-202ENST00000440097 ESRP2Q9H6T0 727 aaKnown RBP12.58□□□□□ -0.4
LIMD1-202ENST00000440097 NDRG3Q9UGV2 375 aa12.58□□□□□ -0.4
LIMD1-202ENST00000440097 ETV2O00321 342 aaPredicted RBP12.58□□□□□ -0.4
LIMD1-202ENST00000440097 WNT11O96014 354 aa12.58□□□□□ -0.4
LIMD1-202ENST00000440097 RAB40ALP0C0E4 278 aa12.58□□□□□ -0.4
LIMD1-202ENST00000440097 DNASE1L1P49184 302 aa12.58□□□□□ -0.4
LIMD1-202ENST00000440097 PLA2G2CQ5R387 149 aa12.58□□□□□ -0.4
LIMD1-202ENST00000440097 SLC26A10Q8NG04 563 aa12.58□□□□□ -0.4
LIMD1-202ENST00000440097 OR52N5Q8NH56 324 aa12.58□□□□□ -0.4
LIMD1-202ENST00000440097 RAB40AQ8WXH6 277 aa12.58□□□□□ -0.4
LIMD1-202ENST00000440097 C4orf45Q96LM5 186 aa12.58□□□□□ -0.4
LIMD1-202ENST00000440097 B3GAT1Q9P2W7 334 aa12.58□□□□□ -0.4
LIMD1-202ENST00000440097 KCNK7Q9Y2U2 307 aa12.58□□□□□ -0.4
LIMD1-202ENST00000440097 LRP12Q9Y561 859 aa12.58□□□□□ -0.4
LIMD1-202ENST00000440097 ZNF292O60281 2723 aa12.57□□□□□ -0.4
LIMD1-202ENST00000440097 ZNF254O75437 659 aa12.57□□□□□ -0.4
LIMD1-202ENST00000440097 P04436 131 aa12.57□□□□□ -0.4
LIMD1-202ENST00000440097 UBBP0CG47 229 aa12.57□□□□□ -0.4
LIMD1-202ENST00000440097 UBCP0CG48 685 aaKnown RBP12.57□□□□□ -0.4
LIMD1-202ENST00000440097 HOXB1P14653 301 aaPredicted RBP12.57□□□□□ -0.4
LIMD1-202ENST00000440097 GPR85P60893 370 aa12.57□□□□□ -0.4
LIMD1-202ENST00000440097 RPS27AP62979 156 aaKnown RBP12.57□□□□□ -0.4
LIMD1-202ENST00000440097 UBA52P62987 128 aaKnown RBP12.57□□□□□ -0.4
LIMD1-202ENST00000440097 STAC2Q6ZMT1 411 aa12.57□□□□□ -0.4
LIMD1-202ENST00000440097 TMPRSS12Q86WS5 348 aa12.57□□□□□ -0.4
LIMD1-202ENST00000440097 RPS4Y2Q8TD47 263 aa12.57□□□□□ -0.4
LIMD1-202ENST00000440097 PAQR8Q8TEZ7 354 aa12.57□□□□□ -0.4
LIMD1-202ENST00000440097 ANGPTL4Q9BY76 406 aa12.57□□□□□ -0.4
LIMD1-202ENST00000440097 P4HTMQ9NXG6 502 aa12.57□□□□□ -0.4
LIMD1-202ENST00000440097 FOXJ2Q9P0K8 574 aa12.57□□□□□ -0.4
LIMD1-202ENST00000440097 KLHL13Q9P2N7 655 aa12.57□□□□□ -0.4
LIMD1-202ENST00000440097 EMC9Q9Y3B6 208 aa12.57□□□□□ -0.4
LIMD1-202ENST00000440097 ZNF726A6NNF4 738 aa12.57□□□□□ -0.4
LIMD1-202ENST00000440097 ZNF814B7Z6K7 855 aa12.57□□□□□ -0.4
LIMD1-202ENST00000440097 C9orf172C9J069 976 aa12.57□□□□□ -0.4
LIMD1-202ENST00000440097 RAMP1O60894 148 aa12.57□□□□□ -0.4
LIMD1-202ENST00000440097 PNPP00491 289 aa12.57□□□□□ -0.4
LIMD1-202ENST00000440097 IGHG1P01857 330 aa12.57□□□□□ -0.4
LIMD1-202ENST00000440097 H2AFB1P0C5Y9 115 aa12.57□□□□□ -0.4
LIMD1-202ENST00000440097 LIFP15018 202 aa12.57□□□□□ -0.4
LIMD1-202ENST00000440097 KLK2P20151 261 aa12.57□□□□□ -0.4
LIMD1-202ENST00000440097 ADH6P28332 368 aa12.57□□□□□ -0.4
LIMD1-202ENST00000440097 STARP49675 285 aa12.57□□□□□ -0.4
LIMD1-202ENST00000440097 PLA2G7Q13093 441 aa12.57□□□□□ -0.4
LIMD1-202ENST00000440097 SSPNQ14714 243 aa12.57□□□□□ -0.4
LIMD1-202ENST00000440097 HFEQ30201 348 aa12.57□□□□□ -0.4
LIMD1-202ENST00000440097 GLB1L2Q8IW92 636 aa12.57□□□□□ -0.4
LIMD1-202ENST00000440097 TMEM185AQ8NFB2 350 aa12.57□□□□□ -0.4
LIMD1-202ENST00000440097 MIB2Q96AX9 1013 aa12.57□□□□□ -0.4
LIMD1-202ENST00000440097 COA4Q9NYJ1 87 aa12.57□□□□□ -0.4
LIMD1-202ENST00000440097 TRAV14DV4A0A0A6YYC5 116 aa12.56□□□□□ -0.4
LIMD1-202ENST00000440097 F8W036 122 aa12.56□□□□□ -0.4
LIMD1-202ENST00000440097 GPR31O00270 319 aa12.56□□□□□ -0.4
LIMD1-202ENST00000440097 ZNF432O94892 652 aa12.56□□□□□ -0.4
LIMD1-202ENST00000440097 MGMTP16455 207 aa12.56□□□□□ -0.4
LIMD1-202ENST00000440097 KIR3DL2P43630 455 aa12.56□□□□□ -0.4
LIMD1-202ENST00000440097 DSCR4P56555 118 aaPredicted RBP12.56□□□□□ -0.4
LIMD1-202ENST00000440097 MFGE8Q08431 387 aaPredicted RBP12.56□□□□□ -0.4
LIMD1-202ENST00000440097 SPEM2Q0P670 501 aa12.56□□□□□ -0.4
LIMD1-202ENST00000440097 CHST6Q9GZX3 395 aa12.56□□□□□ -0.4
LIMD1-202ENST00000440097 FANCFQ9NPI8 374 aa12.56□□□□□ -0.4
LIMD1-202ENST00000440097 HDGFL3Q9Y3E1 203 aa12.56□□□□□ -0.4
LIMD1-202ENST00000440097 CACNA1GO43497 2377 aa12.56□□□□□ -0.4
LIMD1-202ENST00000440097 IGHV3-15A0A0B4J1V0 119 aa12.56□□□□□ -0.4
LIMD1-202ENST00000440097 A0A1W2PNV4 684 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms