RNA–Protein interactions for RNA: ENST00000439717.2

HSPG2-206, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 637 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-206ENST00000439717 OR2T7P0C7T2 308 aa10.05□□□□□ -0.8
HSPG2-206ENST00000439717 SLC2A1P11166 492 aa10.05□□□□□ -0.8
HSPG2-206ENST00000439717 CFL1P23528 166 aaKnown RBP10.05□□□□□ -0.8
HSPG2-206ENST00000439717 PEX2P28328 305 aa10.05□□□□□ -0.8
HSPG2-206ENST00000439717 CRYBB2P43320 205 aa10.05□□□□□ -0.8
HSPG2-206ENST00000439717 NR4A2P43354 598 aa10.05□□□□□ -0.8
HSPG2-206ENST00000439717 PSMA6P60900 246 aaKnown RBP10.05□□□□□ -0.8
HSPG2-206ENST00000439717 ZNF92Q03936 586 aa10.05□□□□□ -0.8
HSPG2-206ENST00000439717 EGR3Q06889 387 aa10.05□□□□□ -0.8
HSPG2-206ENST00000439717 LOXL1Q08397 574 aaPredicted RBP10.05□□□□□ -0.8
HSPG2-206ENST00000439717 RIN1Q13671 783 aa10.05□□□□□ -0.8
HSPG2-206ENST00000439717 CARTPTQ16568 116 aa10.05□□□□□ -0.8
HSPG2-206ENST00000439717 TSTQ16762 297 aaKnown RBP10.05□□□□□ -0.8
HSPG2-206ENST00000439717 GLYATL3Q5SZD4 288 aa10.05□□□□□ -0.8
HSPG2-206ENST00000439717 OGFRL1Q5TC84 451 aaPredicted RBP10.05□□□□□ -0.8
HSPG2-206ENST00000439717 LPCAT4Q643R3 524 aa10.05□□□□□ -0.8
HSPG2-206ENST00000439717 LRRN1Q6UXK5 716 aa10.05□□□□□ -0.8
HSPG2-206ENST00000439717 Q6ZR03 302 aa10.05□□□□□ -0.8
HSPG2-206ENST00000439717 USP51Q70EK9 711 aa10.05□□□□□ -0.8
HSPG2-206ENST00000439717 PRSS45Q7RTY3 260 aa10.05□□□□□ -0.8
HSPG2-206ENST00000439717 ZNF679Q8IYX0 411 aa10.05□□□□□ -0.8
HSPG2-206ENST00000439717 OR5AS1Q8N127 324 aa10.05□□□□□ -0.8
HSPG2-206ENST00000439717 GALNT4Q8N4A0 578 aa10.05□□□□□ -0.8
HSPG2-206ENST00000439717 OR51G2Q8NGK0 314 aa10.05□□□□□ -0.8
HSPG2-206ENST00000439717 OR13G1Q8NGZ3 307 aa10.05□□□□□ -0.8
HSPG2-206ENST00000439717 OR2T27Q8NH04 317 aa10.05□□□□□ -0.8
HSPG2-206ENST00000439717 SPRYD4Q8WW59 207 aaPredicted RBP10.05□□□□□ -0.8
HSPG2-206ENST00000439717 UBE2FQ969M7 185 aa10.05□□□□□ -0.8
HSPG2-206ENST00000439717 ELMOD3Q96FG2 381 aa10.05□□□□□ -0.8
HSPG2-206ENST00000439717 Q96MT0 163 aa10.05□□□□□ -0.8
HSPG2-206ENST00000439717 OR8B4Q96RC9 309 aa10.05□□□□□ -0.8
HSPG2-206ENST00000439717 APOL4Q9BPW4 351 aa10.05□□□□□ -0.8
HSPG2-206ENST00000439717 SLC30A2Q9BRI3 323 aa10.05□□□□□ -0.8
HSPG2-206ENST00000439717 OR10A2Q9H208 303 aa10.05□□□□□ -0.8
HSPG2-206ENST00000439717 RGCCQ9H4X1 137 aa10.05□□□□□ -0.8
HSPG2-206ENST00000439717 COPS3Q9UNS2 423 aa10.05□□□□□ -0.8
HSPG2-206ENST00000439717 LRP12Q9Y561 859 aa10.05□□□□□ -0.8
HSPG2-206ENST00000439717 IGHV1-69-2A0A0G2JMI3 117 aa10.04□□□□□ -0.8
HSPG2-206ENST00000439717 SMAD7O15105 426 aaKnown RBP10.04□□□□□ -0.8
HSPG2-206ENST00000439717 TBX1O43435 398 aa10.04□□□□□ -0.8
HSPG2-206ENST00000439717 ENTPD6O75354 484 aa10.04□□□□□ -0.8
HSPG2-206ENST00000439717 GABRB1P18505 474 aa10.04□□□□□ -0.8
HSPG2-206ENST00000439717 TNFRSF1AP19438 455 aa10.04□□□□□ -0.8
HSPG2-206ENST00000439717 USF1P22415 310 aaPredicted RBP10.04□□□□□ -0.8
HSPG2-206ENST00000439717 COL8A2P25067 703 aa10.04□□□□□ -0.8
HSPG2-206ENST00000439717 ATP6V1E1P36543 226 aa10.04□□□□□ -0.8
HSPG2-206ENST00000439717 DDOSTP39656 456 aa10.04□□□□□ -0.8
HSPG2-206ENST00000439717 MTNR1AP48039 350 aa10.04□□□□□ -0.8
HSPG2-206ENST00000439717 RIDAP52758 137 aaKnown RBP10.04□□□□□ -0.8
HSPG2-206ENST00000439717 TMEM33P57088 247 aa10.04□□□□□ -0.8
HSPG2-206ENST00000439717 CXCR4P61073 352 aa10.04□□□□□ -0.8
HSPG2-206ENST00000439717 TNFAIP6P98066 277 aaPredicted RBP10.04□□□□□ -0.8
HSPG2-206ENST00000439717 TIGD6Q17RP2 521 aa10.04□□□□□ -0.8
HSPG2-206ENST00000439717 LRRC36Q1X8D7 754 aa10.04□□□□□ -0.8
HSPG2-206ENST00000439717 TTC23Q5W5X9 447 aa10.04□□□□□ -0.8
HSPG2-206ENST00000439717 ZNF322Q6U7Q0 402 aaPredicted RBP10.04□□□□□ -0.8
HSPG2-206ENST00000439717 FAM57BQ71RH2 274 aa10.04□□□□□ -0.8
HSPG2-206ENST00000439717 ENTHD1Q8IYW4 607 aa10.04□□□□□ -0.8
HSPG2-206ENST00000439717 OR2Z1Q8NG97 314 aa10.04□□□□□ -0.8
HSPG2-206ENST00000439717 RHOXF1Q8NHV9 184 aa10.04□□□□□ -0.8
HSPG2-206ENST00000439717 YIPF5Q969M3 257 aa10.04□□□□□ -0.8
HSPG2-206ENST00000439717 ITFG2Q969R8 447 aa10.04□□□□□ -0.8
HSPG2-206ENST00000439717 SGK3Q96BR1 496 aa10.04□□□□□ -0.8
HSPG2-206ENST00000439717 PGAM5Q96HS1 289 aa10.04□□□□□ -0.8
HSPG2-206ENST00000439717 SLC22A4Q9H015 551 aa10.04□□□□□ -0.8
HSPG2-206ENST00000439717 TMEM100Q9NV29 134 aa10.04□□□□□ -0.8
HSPG2-206ENST00000439717 IL19Q9UHD0 177 aa10.04□□□□□ -0.8
HSPG2-206ENST00000439717 ZNF391Q9UJN7 358 aa10.04□□□□□ -0.8
HSPG2-206ENST00000439717 NOP16Q9Y3C1 178 aaKnown RBP10.04□□□□□ -0.8
HSPG2-206ENST00000439717 N6AMT1Q9Y5N5 214 aa10.04□□□□□ -0.8
HSPG2-206ENST00000439717 FLNAP21333 2647 aaKnown RBP10.03□□□□□ -0.8
HSPG2-206ENST00000439717 TMEM269A0A1B0GVZ9 245 aa10.03□□□□□ -0.8
HSPG2-206ENST00000439717 C5orf63A6NC05 138 aa10.03□□□□□ -0.8
HSPG2-206ENST00000439717 GGT3PA6NGU5 568 aa10.03□□□□□ -0.8
HSPG2-206ENST00000439717 CD300LBA8K4G0 201 aa10.03□□□□□ -0.8
HSPG2-206ENST00000439717 LYNX1G3V0Z9 82 aa10.03□□□□□ -0.8
HSPG2-206ENST00000439717 RP2O75695 350 aa10.03□□□□□ -0.8
HSPG2-206ENST00000439717 LYNX1P0DP58 116 aa10.03□□□□□ -0.8
HSPG2-206ENST00000439717 SLC34A1Q06495 639 aa10.03□□□□□ -0.8
HSPG2-206ENST00000439717 SNCBQ16143 134 aa10.03□□□□□ -0.8
HSPG2-206ENST00000439717 HFEQ30201 348 aa10.03□□□□□ -0.8
HSPG2-206ENST00000439717 ZNF829Q3KNS6 432 aaPredicted RBP10.03□□□□□ -0.8
HSPG2-206ENST00000439717 OR2AE1Q8NHA4 323 aa10.03□□□□□ -0.8
HSPG2-206ENST00000439717 RNFT2Q96EX2 444 aa10.03□□□□□ -0.8
HSPG2-206ENST00000439717 REEP6Q96HR9 211 aa10.03□□□□□ -0.8
HSPG2-206ENST00000439717 BPESC1Q9GZL8 116 aa10.03□□□□□ -0.8
HSPG2-206ENST00000439717 VCXQ9H320 206 aa10.03□□□□□ -0.8
HSPG2-206ENST00000439717 ZNF275Q9NSD4 429 aaPredicted RBP10.03□□□□□ -0.8
HSPG2-206ENST00000439717 FAM206AQ9NX38 181 aa10.03□□□□□ -0.8
HSPG2-206ENST00000439717 MRPL15Q9P015 296 aaKnown RBP10.03□□□□□ -0.8
HSPG2-206ENST00000439717 IKZF2Q9UKS7 526 aa10.03□□□□□ -0.8
HSPG2-206ENST00000439717 PCDHGB1Q9Y5G3 927 aa10.03□□□□□ -0.8
HSPG2-206ENST00000439717 F8P00451 2351 aa10.03□□□□□ -0.8
HSPG2-206ENST00000439717 A0A1W2PQL4 384 aaPredicted RBP10.02□□□□□ -0.81
HSPG2-206ENST00000439717 PRR32B1ATL7 298 aa10.02□□□□□ -0.81
HSPG2-206ENST00000439717 PSMD9O00233 223 aa10.02□□□□□ -0.81
HSPG2-206ENST00000439717 CDC14BO60729 498 aa10.02□□□□□ -0.81
HSPG2-206ENST00000439717 LILRA1O75019 489 aa10.02□□□□□ -0.81
HSPG2-206ENST00000439717 KRT8P05787 483 aa10.02□□□□□ -0.81
HSPG2-206ENST00000439717 TACSTD2P09758 323 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms