RNA–Protein interactions for RNA: ENST00000439518.5

NCKIPSD-206, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 1 (best)

Gene NCKIPSD, Length 1,214 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-206ENST00000439518 KLBQ86Z14 1044 aa17■□□□□ 0.31
NCKIPSD-206ENST00000439518 C1orf87Q8N0U7 546 aa17■□□□□ 0.31
NCKIPSD-206ENST00000439518 ZDHHC22Q8N966 263 aa17■□□□□ 0.31
NCKIPSD-206ENST00000439518 ZNF511Q8NB15 262 aa17■□□□□ 0.31
NCKIPSD-206ENST00000439518 Q8TCH9 128 aa17■□□□□ 0.31
NCKIPSD-206ENST00000439518 C22orf15Q8WYQ4 148 aa17■□□□□ 0.31
NCKIPSD-206ENST00000439518 ERGIC1Q969X5 290 aa17■□□□□ 0.31
NCKIPSD-206ENST00000439518 MIOXQ9UGB7 285 aa17■□□□□ 0.31
NCKIPSD-206ENST00000439518 OR5V1Q9UGF6 321 aa17■□□□□ 0.31
NCKIPSD-206ENST00000439518 PRPF19Q9UMS4 504 aaKnown RBP17■□□□□ 0.31
NCKIPSD-206ENST00000439518 TMEM89A2RUT3 159 aa16.99■□□□□ 0.31
NCKIPSD-206ENST00000439518 CD300LBA8K4G0 201 aa16.99■□□□□ 0.31
NCKIPSD-206ENST00000439518 SOX14O95416 240 aa16.99■□□□□ 0.31
NCKIPSD-206ENST00000439518 RPS2P15880 293 aaKnown RBP16.99■□□□□ 0.31
NCKIPSD-206ENST00000439518 SPI1P17947 270 aa16.99■□□□□ 0.31
NCKIPSD-206ENST00000439518 CALB2P22676 271 aa16.99■□□□□ 0.31
NCKIPSD-206ENST00000439518 FMO3P31513 532 aa16.99■□□□□ 0.31
NCKIPSD-206ENST00000439518 CD80P33681 288 aa16.99■□□□□ 0.31
NCKIPSD-206ENST00000439518 ENTPD1P49961 510 aa16.99■□□□□ 0.31
NCKIPSD-206ENST00000439518 ACTG1P63261 375 aa16.99■□□□□ 0.31
NCKIPSD-206ENST00000439518 PAX8Q06710 450 aa16.99■□□□□ 0.31
NCKIPSD-206ENST00000439518 FAM201AQ5SY85 155 aa16.99■□□□□ 0.31
NCKIPSD-206ENST00000439518 CD300LDQ6UXZ3 194 aa16.99■□□□□ 0.31
NCKIPSD-206ENST00000439518 OR2T33Q8NG76 320 aa16.99■□□□□ 0.31
NCKIPSD-206ENST00000439518 SPRYD4Q8WW59 207 aaPredicted RBP16.99■□□□□ 0.31
NCKIPSD-206ENST00000439518 DACT3Q96B18 629 aaPredicted RBP16.99■□□□□ 0.31
NCKIPSD-206ENST00000439518 MRI1Q9BV20 369 aa16.99■□□□□ 0.31
NCKIPSD-206ENST00000439518 SSBP3Q9BWW4 388 aaPredicted RBP16.99■□□□□ 0.31
NCKIPSD-206ENST00000439518 SLC22A4Q9H015 551 aa16.99■□□□□ 0.31
NCKIPSD-206ENST00000439518 ARMC1Q9NVT9 282 aa16.99■□□□□ 0.31
NCKIPSD-206ENST00000439518 NUP50Q9UKX7 468 aa16.99■□□□□ 0.31
NCKIPSD-206ENST00000439518 GYPBP06028 91 aa16.98■□□□□ 0.31
NCKIPSD-206ENST00000439518 SPARCP09486 303 aa16.98■□□□□ 0.31
NCKIPSD-206ENST00000439518 CLUP10909 449 aa16.98■□□□□ 0.31
NCKIPSD-206ENST00000439518 CA6P23280 308 aa16.98■□□□□ 0.31
NCKIPSD-206ENST00000439518 ARMCX4Q5H9R4 360 aa16.98■□□□□ 0.31
NCKIPSD-206ENST00000439518 CCDC197Q8NCU1 140 aa16.98■□□□□ 0.31
NCKIPSD-206ENST00000439518 OR2AE1Q8NHA4 323 aa16.98■□□□□ 0.31
NCKIPSD-206ENST00000439518 SLAMF6Q96DU3 332 aa16.98■□□□□ 0.31
NCKIPSD-206ENST00000439518 ASB9Q96DX5 294 aa16.98■□□□□ 0.31
NCKIPSD-206ENST00000439518 NEIL1Q96FI4 390 aaPredicted RBP16.98■□□□□ 0.31
NCKIPSD-206ENST00000439518 NTN4Q9HB63 628 aa16.98■□□□□ 0.31
NCKIPSD-206ENST00000439518 ZNF69Q9UC07 566 aa16.98■□□□□ 0.31
NCKIPSD-206ENST00000439518 PPIAL4AQ9Y536 164 aa16.98■□□□□ 0.31
NCKIPSD-206ENST00000439518 ZNF593O00488 134 aaPredicted RBP16.97■□□□□ 0.31
NCKIPSD-206ENST00000439518 ACOT8O14734 319 aa16.97■□□□□ 0.31
NCKIPSD-206ENST00000439518 GMDSO60547 372 aa16.97■□□□□ 0.31
NCKIPSD-206ENST00000439518 FAM20BO75063 409 aa16.97■□□□□ 0.31
NCKIPSD-206ENST00000439518 PTBP3O95758 552 aaKnown RBP16.97■□□□□ 0.31
NCKIPSD-206ENST00000439518 RAP2AP10114 183 aa16.97■□□□□ 0.31
NCKIPSD-206ENST00000439518 CFPP27918 469 aa16.97■□□□□ 0.31
NCKIPSD-206ENST00000439518 GK3PQ14409 553 aa16.97■□□□□ 0.31
NCKIPSD-206ENST00000439518 OR8G1Q15617 311 aa16.97■□□□□ 0.31
NCKIPSD-206ENST00000439518 MPPED2Q15777 294 aa16.97■□□□□ 0.31
NCKIPSD-206ENST00000439518 GLYATL3Q5SZD4 288 aa16.97■□□□□ 0.31
NCKIPSD-206ENST00000439518 LINC01590Q5TEZ4 76 aa16.97■□□□□ 0.31
NCKIPSD-206ENST00000439518 PRAMEF6Q5VXH4 476 aa16.97■□□□□ 0.31
NCKIPSD-206ENST00000439518 OR11L1Q8NGX0 322 aa16.97■□□□□ 0.31
NCKIPSD-206ENST00000439518 GCDHQ92947 438 aaPredicted RBP16.97■□□□□ 0.31
NCKIPSD-206ENST00000439518 KCNJ15Q99712 375 aa16.97■□□□□ 0.31
NCKIPSD-206ENST00000439518 NIPSNAP1Q9BPW8 284 aa16.97■□□□□ 0.31
NCKIPSD-206ENST00000439518 COPS4Q9BT78 406 aa16.97■□□□□ 0.31
NCKIPSD-206ENST00000439518 CMC2Q9NRP2 79 aa16.97■□□□□ 0.31
NCKIPSD-206ENST00000439518 CENPMQ9NSP4 180 aa16.97■□□□□ 0.31
NCKIPSD-206ENST00000439518 TAS2R1Q9NYW7 299 aa16.97■□□□□ 0.31
NCKIPSD-206ENST00000439518 NOP16Q9Y3C1 178 aaKnown RBP16.97■□□□□ 0.31
NCKIPSD-206ENST00000439518 IFNGP01579 166 aa16.96■□□□□ 0.31
NCKIPSD-206ENST00000439518 PPIAL4GP0DN37 164 aa16.96■□□□□ 0.31
NCKIPSD-206ENST00000439518 IRF2P14316 349 aa16.96■□□□□ 0.31
NCKIPSD-206ENST00000439518 PRKXP51817 358 aa16.96■□□□□ 0.31
NCKIPSD-206ENST00000439518 BLVRAP53004 296 aa16.96■□□□□ 0.31
NCKIPSD-206ENST00000439518 GNB2P62879 340 aa16.96■□□□□ 0.31
NCKIPSD-206ENST00000439518 UBA52P62987 128 aaKnown RBP16.96■□□□□ 0.31
NCKIPSD-206ENST00000439518 DOK3Q7L591 496 aa16.96■□□□□ 0.31
NCKIPSD-206ENST00000439518 ADGRG5Q8IZF4 528 aa16.96■□□□□ 0.31
NCKIPSD-206ENST00000439518 OR10G2Q8NGC3 310 aa16.96■□□□□ 0.31
NCKIPSD-206ENST00000439518 OR6K6Q8NGW6 343 aa16.96■□□□□ 0.31
NCKIPSD-206ENST00000439518 PLEKHA8Q96JA3 519 aa16.96■□□□□ 0.31
NCKIPSD-206ENST00000439518 CLPTM1LQ96KA5 538 aa16.96■□□□□ 0.31
NCKIPSD-206ENST00000439518 FEVQ99581 238 aa16.96■□□□□ 0.31
NCKIPSD-206ENST00000439518 C1orf21Q9H246 121 aa16.96■□□□□ 0.31
NCKIPSD-206ENST00000439518 UFSP2Q9NUQ7 469 aa16.96■□□□□ 0.31
NCKIPSD-206ENST00000439518 DOCK11Q5JSL3 2073 aa16.96■□□□□ 0.31
NCKIPSD-206ENST00000439518 IGHV2-70DA0A0C4DH43 119 aa16.95■□□□□ 0.3
NCKIPSD-206ENST00000439518 DHRS12A0PJE2 317 aa16.95■□□□□ 0.3
NCKIPSD-206ENST00000439518 GGT3PA6NGU5 568 aa16.95■□□□□ 0.3
NCKIPSD-206ENST00000439518 RIIAD1A6NNX1 92 aa16.95■□□□□ 0.3
NCKIPSD-206ENST00000439518 ZNF878C9JN71 531 aa16.95■□□□□ 0.3
NCKIPSD-206ENST00000439518 SLC2A1P11166 492 aa16.95■□□□□ 0.3
NCKIPSD-206ENST00000439518 PITPNBP48739 271 aa16.95■□□□□ 0.3
NCKIPSD-206ENST00000439518 LYPD2Q6UXB3 125 aa16.95■□□□□ 0.3
NCKIPSD-206ENST00000439518 LRRN1Q6UXK5 716 aa16.95■□□□□ 0.3
NCKIPSD-206ENST00000439518 DCDC5Q6ZRR9 648 aa16.95■□□□□ 0.3
NCKIPSD-206ENST00000439518 NLRC3Q7RTR2 1065 aa16.95■□□□□ 0.3
NCKIPSD-206ENST00000439518 BCL6BQ8N143 479 aaPredicted RBP16.95■□□□□ 0.3
NCKIPSD-206ENST00000439518 SIGLECL1Q8N7X8 197 aa16.95■□□□□ 0.3
NCKIPSD-206ENST00000439518 PLPP7Q8NBV4 271 aa16.95■□□□□ 0.3
NCKIPSD-206ENST00000439518 OR8B3Q8NGG8 313 aa16.95■□□□□ 0.3
NCKIPSD-206ENST00000439518 RAB40AQ8WXH6 277 aa16.95■□□□□ 0.3
NCKIPSD-206ENST00000439518 CCDC124Q96CT7 223 aaKnown RBP16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms