RNA–Protein interactions for RNA: ENST00000439374.6

CDC42SE1-202, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CDC42SE1, Length 3,498 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-202ENST00000439374 LPAL2Q16609 132 aa8.9□□□□□ -0.98
CDC42SE1-202ENST00000439374 PRAMEF20Q5VT98 475 aa8.9□□□□□ -0.98
CDC42SE1-202ENST00000439374 SLC36A1Q7Z2H8 476 aa8.9□□□□□ -0.98
CDC42SE1-202ENST00000439374 MRGPREQ86SM8 312 aa8.9□□□□□ -0.98
CDC42SE1-202ENST00000439374 ZNF679Q8IYX0 411 aa8.9□□□□□ -0.98
CDC42SE1-202ENST00000439374 OR6K3Q8NGY3 331 aa8.9□□□□□ -0.98
CDC42SE1-202ENST00000439374 FAM71F1Q96KD3 344 aaPredicted RBP8.9□□□□□ -0.98
CDC42SE1-202ENST00000439374 MEGF10Q96KG7 1140 aa8.9□□□□□ -0.98
CDC42SE1-202ENST00000439374 PHB2Q99623 299 aa8.9□□□□□ -0.98
CDC42SE1-202ENST00000439374 RAB33BQ9H082 229 aa8.9□□□□□ -0.98
CDC42SE1-202ENST00000439374 SLC25A32Q9H2D1 315 aa8.9□□□□□ -0.98
CDC42SE1-202ENST00000439374 FGF21Q9NSA1 209 aa8.9□□□□□ -0.98
CDC42SE1-202ENST00000439374 UQCC1Q9NVA1 299 aa8.9□□□□□ -0.98
CDC42SE1-202ENST00000439374 OR5AC2Q9NZP5 309 aa8.9□□□□□ -0.98
CDC42SE1-202ENST00000439374 PCOLCE2Q9UKZ9 415 aa8.9□□□□□ -0.98
CDC42SE1-202ENST00000439374 NPTNQ9Y639 398 aa8.9□□□□□ -0.98
CDC42SE1-202ENST00000439374 HS3ST3A1Q9Y663 406 aa8.9□□□□□ -0.98
CDC42SE1-202ENST00000439374 FAM221AA4D161 298 aa8.9□□□□□ -0.99
CDC42SE1-202ENST00000439374 NDUFA2O43678 99 aa8.9□□□□□ -0.99
CDC42SE1-202ENST00000439374 LYPD3O95274 346 aa8.9□□□□□ -0.99
CDC42SE1-202ENST00000439374 TPT1P13693 172 aaKnown RBP8.9□□□□□ -0.99
CDC42SE1-202ENST00000439374 HLA-DOBP13765 273 aa8.9□□□□□ -0.99
CDC42SE1-202ENST00000439374 IL11P20809 199 aa8.9□□□□□ -0.99
CDC42SE1-202ENST00000439374 HTR2CP28335 458 aa8.9□□□□□ -0.99
CDC42SE1-202ENST00000439374 LTBRP36941 435 aa8.9□□□□□ -0.99
CDC42SE1-202ENST00000439374 CAPZBP47756 277 aa8.9□□□□□ -0.99
CDC42SE1-202ENST00000439374 HOXA1P49639 335 aaPredicted RBP8.9□□□□□ -0.99
CDC42SE1-202ENST00000439374 SNU13P55769 128 aaKnown RBP8.9□□□□□ -0.99
CDC42SE1-202ENST00000439374 CLDN6P56747 220 aa8.9□□□□□ -0.99
CDC42SE1-202ENST00000439374 BDH1Q02338 343 aa8.9□□□□□ -0.99
CDC42SE1-202ENST00000439374 POU3F1Q03052 451 aaPredicted RBP8.9□□□□□ -0.99
CDC42SE1-202ENST00000439374 ZNF117Q03924 483 aa8.9□□□□□ -0.99
CDC42SE1-202ENST00000439374 ACSM1Q08AH1 577 aa8.9□□□□□ -0.99
CDC42SE1-202ENST00000439374 ZNF74Q16587 644 aa8.9□□□□□ -0.99
CDC42SE1-202ENST00000439374 SP6Q3SY56 376 aa8.9□□□□□ -0.99
CDC42SE1-202ENST00000439374 PHF19Q5T6S3 580 aa8.9□□□□□ -0.99
CDC42SE1-202ENST00000439374 RNF144BQ7Z419 303 aa8.9□□□□□ -0.99
CDC42SE1-202ENST00000439374 SUMF1Q8NBK3 374 aa8.9□□□□□ -0.99
CDC42SE1-202ENST00000439374 ZNF417Q8TAU3 575 aa8.9□□□□□ -0.99
CDC42SE1-202ENST00000439374 ADAMTS18Q8TE60 1221 aa8.9□□□□□ -0.99
CDC42SE1-202ENST00000439374 GLYATL2Q8WU03 294 aa8.9□□□□□ -0.99
CDC42SE1-202ENST00000439374 MITD1Q8WV92 249 aa8.9□□□□□ -0.99
CDC42SE1-202ENST00000439374 BSCL2Q96G97 398 aaPredicted RBP8.9□□□□□ -0.99
CDC42SE1-202ENST00000439374 POM121Q96HA1 1249 aa8.9□□□□□ -0.99
CDC42SE1-202ENST00000439374 REEP6Q96HR9 211 aa8.9□□□□□ -0.99
CDC42SE1-202ENST00000439374 LCORQ96JN0 433 aaPredicted RBP8.9□□□□□ -0.99
CDC42SE1-202ENST00000439374 ZNF587Q96SQ5 575 aaPredicted RBP8.9□□□□□ -0.99
CDC42SE1-202ENST00000439374 TMPRSS13Q9BYE2 586 aa8.9□□□□□ -0.99
CDC42SE1-202ENST00000439374 C8orf33Q9H7E9 229 aaPredicted RBP8.9□□□□□ -0.99
CDC42SE1-202ENST00000439374 SERTAD3Q9UJW9 196 aa8.9□□□□□ -0.99
CDC42SE1-202ENST00000439374 RFNGQ9Y644 331 aa8.9□□□□□ -0.99
CDC42SE1-202ENST00000439374 RNF222A6NCQ9 220 aa8.89□□□□□ -0.99
CDC42SE1-202ENST00000439374 ZNF878C9JN71 531 aa8.89□□□□□ -0.99
CDC42SE1-202ENST00000439374 OGG1O15527 345 aa8.89□□□□□ -0.99
CDC42SE1-202ENST00000439374 ZNHIT1O43257 154 aa8.89□□□□□ -0.99
CDC42SE1-202ENST00000439374 DIRAS3O95661 229 aa8.89□□□□□ -0.99
CDC42SE1-202ENST00000439374 OR3A2P47893 321 aa8.89□□□□□ -0.99
CDC42SE1-202ENST00000439374 TAS2R19P59542 299 aa8.89□□□□□ -0.99
CDC42SE1-202ENST00000439374 FXYD4P59646 89 aa8.89□□□□□ -0.99
CDC42SE1-202ENST00000439374 RPS4XP62701 263 aaKnown RBP8.89□□□□□ -0.99
CDC42SE1-202ENST00000439374 PMPCAQ10713 525 aa8.89□□□□□ -0.99
CDC42SE1-202ENST00000439374 Q6ZRG5 221 aa8.89□□□□□ -0.99
CDC42SE1-202ENST00000439374 ACOT7LQ6ZUV0 252 aa8.89□□□□□ -0.99
CDC42SE1-202ENST00000439374 CPEB2Q7Z5Q1 589 aaKnown RBP8.89□□□□□ -0.99
CDC42SE1-202ENST00000439374 BAP18Q8IXM2 172 aa8.89□□□□□ -0.99
CDC42SE1-202ENST00000439374 OR10H5Q8NGA6 315 aa8.89□□□□□ -0.99
CDC42SE1-202ENST00000439374 OR6N1Q8NGY5 312 aa8.89□□□□□ -0.99
CDC42SE1-202ENST00000439374 MFSD8Q8NHS3 518 aa8.89□□□□□ -0.99
CDC42SE1-202ENST00000439374 FGGYQ96C11 551 aa8.89□□□□□ -0.99
CDC42SE1-202ENST00000439374 RRNAD1Q96FB5 475 aaKnown RBP8.89□□□□□ -0.99
CDC42SE1-202ENST00000439374 S1PR5Q9H228 398 aa8.89□□□□□ -0.99
CDC42SE1-202ENST00000439374 MMP25Q9NPA2 562 aa8.89□□□□□ -0.99
CDC42SE1-202ENST00000439374 INPP5EQ9NRR6 644 aa8.89□□□□□ -0.99
CDC42SE1-202ENST00000439374 MRPS18BQ9Y676 258 aaKnown RBP8.89□□□□□ -0.99
CDC42SE1-202ENST00000439374 ZNF407Q9C0G0 2248 aa8.89□□□□□ -0.99
CDC42SE1-202ENST00000439374 A0A0D9SG52 128 aa8.89□□□□□ -0.99
CDC42SE1-202ENST00000439374 A0A1B0GV90 55 aa8.89□□□□□ -0.99
CDC42SE1-202ENST00000439374 A0A1W2PPC1 479 aa8.89□□□□□ -0.99
CDC42SE1-202ENST00000439374 ZNF727A8MUV8 499 aa8.89□□□□□ -0.99
CDC42SE1-202ENST00000439374 NPIPA5E9PKD4 350 aa8.89□□□□□ -0.99
CDC42SE1-202ENST00000439374 SULT2B1O00204 365 aa8.89□□□□□ -0.99
CDC42SE1-202ENST00000439374 NSA2O95478 260 aaKnown RBP8.89□□□□□ -0.99
CDC42SE1-202ENST00000439374 F10P00742 488 aa8.89□□□□□ -0.99
CDC42SE1-202ENST00000439374 OR8U9P0C7N5 309 aa8.89□□□□□ -0.99
CDC42SE1-202ENST00000439374 CPN1P15169 458 aa8.89□□□□□ -0.99
CDC42SE1-202ENST00000439374 ZNF44P15621 663 aa8.89□□□□□ -0.99
CDC42SE1-202ENST00000439374 CCINQ13939 588 aa8.89□□□□□ -0.99
CDC42SE1-202ENST00000439374 ACTBL2Q562R1 376 aa8.89□□□□□ -0.99
CDC42SE1-202ENST00000439374 HACD4Q5VWC8 232 aa8.89□□□□□ -0.99
CDC42SE1-202ENST00000439374 BRICD5Q6PL45 260 aa8.89□□□□□ -0.99
CDC42SE1-202ENST00000439374 ZNF704Q6ZNC4 412 aaPredicted RBP8.89□□□□□ -0.99
CDC42SE1-202ENST00000439374 OR8U1Q8NH10 309 aa8.89□□□□□ -0.99
CDC42SE1-202ENST00000439374 CTHRC1Q96CG8 243 aa8.89□□□□□ -0.99
CDC42SE1-202ENST00000439374 SEH1LQ96EE3 360 aa8.89□□□□□ -0.99
CDC42SE1-202ENST00000439374 TSPAN32Q96QS1 320 aa8.89□□□□□ -0.99
CDC42SE1-202ENST00000439374 KLK13Q9UKR3 277 aa8.89□□□□□ -0.99
CDC42SE1-202ENST00000439374 NPIPA1Q9UND3 350 aa8.89□□□□□ -0.99
CDC42SE1-202ENST00000439374 MEX3AA1L020 520 aaKnown RBP8.89□□□□□ -0.99
CDC42SE1-202ENST00000439374 CXorf65A6NEN9 183 aa8.89□□□□□ -0.99
CDC42SE1-202ENST00000439374 C9JQL5 133 aa8.89□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms