RNA–Protein interactions for RNA: ENST00000439235.5

CHD3-204, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 5

Gene CHD3, Length 1,263 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-204ENST00000439235 SF3B6Q9Y3B4 125 aaKnown RBP17.9■□□□□ 0.46
CHD3-204ENST00000439235 NBASA2RRP1 2371 aa17.89■□□□□ 0.45
CHD3-204ENST00000439235 P2RY10O00398 339 aa17.89■□□□□ 0.45
CHD3-204ENST00000439235 CASKO14936 926 aa17.89■□□□□ 0.45
CHD3-204ENST00000439235 SMPD2O60906 423 aa17.89■□□□□ 0.45
CHD3-204ENST00000439235 RGS9O75916 674 aaPredicted RBP17.89■□□□□ 0.45
CHD3-204ENST00000439235 RAD52P43351 418 aa17.89■□□□□ 0.45
CHD3-204ENST00000439235 GFOD2Q3B7J2 385 aa17.89■□□□□ 0.45
CHD3-204ENST00000439235 RFPL4BQ6ZWI9 263 aa17.89■□□□□ 0.45
CHD3-204ENST00000439235 C1orf174Q8IYL3 243 aa17.89■□□□□ 0.45
CHD3-204ENST00000439235 CCDC54Q8NEL0 328 aa17.89■□□□□ 0.45
CHD3-204ENST00000439235 ABHD4Q8TB40 342 aa17.89■□□□□ 0.45
CHD3-204ENST00000439235 OR51E1Q8TCB6 317 aa17.89■□□□□ 0.45
CHD3-204ENST00000439235 SSC4DQ8WTU2 575 aa17.89■□□□□ 0.45
CHD3-204ENST00000439235 TMEM203Q969S6 136 aa17.89■□□□□ 0.45
CHD3-204ENST00000439235 BCL2L14Q9BZR8 327 aa17.89■□□□□ 0.45
CHD3-204ENST00000439235 ESRP2Q9H6T0 727 aaKnown RBP17.89■□□□□ 0.45
CHD3-204ENST00000439235 NDUFA13Q9P0J0 144 aa17.89■□□□□ 0.45
CHD3-204ENST00000439235 ZNF319Q9P2F9 582 aa17.89■□□□□ 0.45
CHD3-204ENST00000439235 SPEF1Q9Y4P9 236 aa17.89■□□□□ 0.45
CHD3-204ENST00000439235 KLF2Q9Y5W3 355 aaPredicted RBP17.89■□□□□ 0.45
CHD3-204ENST00000439235 ZNF462Q96JM2 2506 aa17.88■□□□□ 0.45
CHD3-204ENST00000439235 SMIM31A0A1B0GVY4 71 aa17.88■□□□□ 0.45
CHD3-204ENST00000439235 NOL3O60936 208 aaKnown RBP17.88■□□□□ 0.45
CHD3-204ENST00000439235 ATE1O95260 518 aa17.88■□□□□ 0.45
CHD3-204ENST00000439235 IGLV3-1P01715 115 aa17.88■□□□□ 0.45
CHD3-204ENST00000439235 ZNF12P17014 697 aa17.88■□□□□ 0.45
CHD3-204ENST00000439235 CCL1P22362 96 aa17.88■□□□□ 0.45
CHD3-204ENST00000439235 GALP22466 123 aa17.88■□□□□ 0.45
CHD3-204ENST00000439235 TUBG1P23258 451 aa17.88■□□□□ 0.45
CHD3-204ENST00000439235 GADD45AP24522 165 aa17.88■□□□□ 0.45
CHD3-204ENST00000439235 CALCRP30988 508 aa17.88■□□□□ 0.45
CHD3-204ENST00000439235 SNTB1Q13884 538 aaKnown RBP17.88■□□□□ 0.45
CHD3-204ENST00000439235 GLYATL3Q5SZD4 288 aa17.88■□□□□ 0.45
CHD3-204ENST00000439235 GPR107Q5VW38 600 aa17.88■□□□□ 0.45
CHD3-204ENST00000439235 DOK3Q7L591 496 aa17.88■□□□□ 0.45
CHD3-204ENST00000439235 CLVS1Q8IUQ0 354 aaPredicted RBP17.88■□□□□ 0.45
CHD3-204ENST00000439235 ZNF101Q8IZC7 436 aa17.88■□□□□ 0.45
CHD3-204ENST00000439235 TSEN15Q8WW01 171 aaKnown RBP17.88■□□□□ 0.45
CHD3-204ENST00000439235 RGP1Q92546 391 aaPredicted RBP17.88■□□□□ 0.45
CHD3-204ENST00000439235 REEP6Q96HR9 211 aa17.88■□□□□ 0.45
CHD3-204ENST00000439235 GPR84Q9NQS5 396 aa17.88■□□□□ 0.45
CHD3-204ENST00000439235 TUBG2Q9NRH3 451 aa17.88■□□□□ 0.45
CHD3-204ENST00000439235 SSR3Q9UNL2 185 aa17.88■□□□□ 0.45
CHD3-204ENST00000439235 C5orf63A6NC05 138 aa17.87■□□□□ 0.45
CHD3-204ENST00000439235 SYT7O43581 403 aa17.87■□□□□ 0.45
CHD3-204ENST00000439235 MTRF1O75570 445 aaKnown RBP17.87■□□□□ 0.45
CHD3-204ENST00000439235 FAM157BP0CG42 384 aa17.87■□□□□ 0.45
CHD3-204ENST00000439235 MAPK3P27361 379 aaPredicted RBP17.87■□□□□ 0.45
CHD3-204ENST00000439235 KIR2DL3P43628 341 aa17.87■□□□□ 0.45
CHD3-204ENST00000439235 UCP2P55851 309 aa17.87■□□□□ 0.45
CHD3-204ENST00000439235 PPP1CBP62140 327 aa17.87■□□□□ 0.45
CHD3-204ENST00000439235 BEX5Q5H9J7 111 aa17.87■□□□□ 0.45
CHD3-204ENST00000439235 CD200R1LQ6Q8B3 271 aa17.87■□□□□ 0.45
CHD3-204ENST00000439235 PAMR1Q6UXH9 720 aa17.87■□□□□ 0.45
CHD3-204ENST00000439235 GDPGP1Q6ZNW5 385 aa17.87■□□□□ 0.45
CHD3-204ENST00000439235 ANKRD13BQ86YJ7 626 aa17.87■□□□□ 0.45
CHD3-204ENST00000439235 RDH10Q8IZV5 341 aa17.87■□□□□ 0.45
CHD3-204ENST00000439235 SPSB4Q96A44 273 aa17.87■□□□□ 0.45
CHD3-204ENST00000439235 SGK3Q96BR1 496 aa17.87■□□□□ 0.45
CHD3-204ENST00000439235 OR51B6Q9H340 312 aa17.87■□□□□ 0.45
CHD3-204ENST00000439235 EXOSC4Q9NPD3 245 aaKnown RBP17.87■□□□□ 0.45
CHD3-204ENST00000439235 ENPP5Q9UJA9 477 aa17.87■□□□□ 0.45
CHD3-204ENST00000439235 DHDHQ9UQ10 334 aa17.87■□□□□ 0.45
CHD3-204ENST00000439235 STARD10Q9Y365 291 aa17.87■□□□□ 0.45
CHD3-204ENST00000439235 TENM4Q6N022 2769 aa17.87■□□□□ 0.45
CHD3-204ENST00000439235 NAV2Q8IVL1 2488 aa17.87■□□□□ 0.45
CHD3-204ENST00000439235 A0A1B0GTI1 187 aa17.86■□□□□ 0.45
CHD3-204ENST00000439235 TRDV1A0A1B0GX56 115 aa17.86■□□□□ 0.45
CHD3-204ENST00000439235 DPRXA6NFQ7 191 aa17.86■□□□□ 0.45
CHD3-204ENST00000439235 GABRPO00591 440 aa17.86■□□□□ 0.45
CHD3-204ENST00000439235 AIREO43918 545 aa17.86■□□□□ 0.45
CHD3-204ENST00000439235 GATBO75879 557 aaKnown RBP17.86■□□□□ 0.45
CHD3-204ENST00000439235 NGFP01138 241 aa17.86■□□□□ 0.45
CHD3-204ENST00000439235 ANOS1P23352 680 aa17.86■□□□□ 0.45
CHD3-204ENST00000439235 BSPH1Q075Z2 132 aa17.86■□□□□ 0.45
CHD3-204ENST00000439235 Q499Y3 187 aa17.86■□□□□ 0.45
CHD3-204ENST00000439235 NCMAPQ5T1S8 102 aa17.86■□□□□ 0.45
CHD3-204ENST00000439235 MRPL21Q7Z2W9 205 aaKnown RBP17.86■□□□□ 0.45
CHD3-204ENST00000439235 OR1J1Q8NGS3 322 aa17.86■□□□□ 0.45
CHD3-204ENST00000439235 OR13C5Q8NGS8 318 aa17.86■□□□□ 0.45
CHD3-204ENST00000439235 OR2AE1Q8NHA4 323 aa17.86■□□□□ 0.45
CHD3-204ENST00000439235 ITFG2Q969R8 447 aa17.86■□□□□ 0.45
CHD3-204ENST00000439235 FAM71F1Q96KD3 344 aaPredicted RBP17.86■□□□□ 0.45
CHD3-204ENST00000439235 CHCHD6Q9BRQ6 235 aa17.86■□□□□ 0.45
CHD3-204ENST00000439235 OR51E2Q9H255 320 aa17.86■□□□□ 0.45
CHD3-204ENST00000439235 PTTG3PQ9NZH4 202 aa17.86■□□□□ 0.45
CHD3-204ENST00000439235 HIVEP3Q5T1R4 2406 aa17.86■□□□□ 0.45
CHD3-204ENST00000439235 TRBV5-5A0A0J9YX44 114 aa17.85■□□□□ 0.45
CHD3-204ENST00000439235 LOC390937A0A1W2PQ73 354 aa17.85■□□□□ 0.45
CHD3-204ENST00000439235 DPPA5A6NC42 116 aa17.85■□□□□ 0.45
CHD3-204ENST00000439235 ATP6V1G2-DDX39BF2Z307 99 aa17.85■□□□□ 0.45
CHD3-204ENST00000439235 ABCD4O14678 606 aa17.85■□□□□ 0.45
CHD3-204ENST00000439235 DHRS3O75911 302 aa17.85■□□□□ 0.45
CHD3-204ENST00000439235 GABARAPO95166 117 aa17.85■□□□□ 0.45
CHD3-204ENST00000439235 CD2P06729 351 aa17.85■□□□□ 0.45
CHD3-204ENST00000439235 OCM2P0CE71 109 aa17.85■□□□□ 0.45
CHD3-204ENST00000439235 NR4A1P22736 598 aa17.85■□□□□ 0.45
CHD3-204ENST00000439235 CRYBB2P43320 205 aa17.85■□□□□ 0.45
CHD3-204ENST00000439235 TMBIM6P55061 237 aa17.85■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms