RNA–Protein interactions for RNA: ENST00000439128.6

NEK1-201, Transcript of NIMA related kinase 1, humanhuman

TSL 1 (best) BASIC

Gene NEK1, Length 5,653 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1-201ENST00000439128 HBG2P69892 147 aa10.86□□□□□ -0.67
NEK1-201ENST00000439128 SFXN4Q6P4A7 337 aa10.86□□□□□ -0.67
NEK1-201ENST00000439128 JAM3Q9BX67 310 aa10.86□□□□□ -0.67
NEK1-201ENST00000439128 H3BMQ9 156 aa10.85□□□□□ -0.67
NEK1-201ENST00000439128 FAHP16930 419 aa10.85□□□□□ -0.67
NEK1-201ENST00000439128 ZNF32P17041 273 aa10.85□□□□□ -0.67
NEK1-201ENST00000439128 OR3A4PP47883 348 aa10.85□□□□□ -0.67
NEK1-201ENST00000439128 PCBP3P57721 371 aaKnown RBP10.85□□□□□ -0.67
NEK1-201ENST00000439128 ERHP84090 104 aaKnown RBP10.85□□□□□ -0.67
NEK1-201ENST00000439128 TAF9Q16594 264 aa10.85□□□□□ -0.67
NEK1-201ENST00000439128 GAB4Q2WGN9 574 aa10.85□□□□□ -0.67
NEK1-201ENST00000439128 OR10V1Q8NGI7 309 aa10.85□□□□□ -0.67
NEK1-201ENST00000439128 DPCDQ9BVM2 203 aaPredicted RBP10.85□□□□□ -0.67
NEK1-201ENST00000439128 SAP30LQ9HAJ7 183 aa10.85□□□□□ -0.67
NEK1-201ENST00000439128 MMP25Q9NPA2 562 aa10.85□□□□□ -0.67
NEK1-201ENST00000439128 OR2M5A3KFT3 312 aa10.85□□□□□ -0.67
NEK1-201ENST00000439128 GDF9O60383 454 aa10.85□□□□□ -0.67
NEK1-201ENST00000439128 FUT6P51993 359 aa10.85□□□□□ -0.67
NEK1-201ENST00000439128 EBPQ15125 230 aaKnown RBP10.85□□□□□ -0.67
NEK1-201ENST00000439128 TBCEQ15813 527 aaPredicted RBP10.85□□□□□ -0.67
NEK1-201ENST00000439128 STUMQ69YW2 141 aa10.85□□□□□ -0.67
NEK1-201ENST00000439128 CCBE1Q6UXH8 406 aaPredicted RBP10.85□□□□□ -0.67
NEK1-201ENST00000439128 THSD4Q6ZMP0 1018 aa10.85□□□□□ -0.67
NEK1-201ENST00000439128 TMEM246Q9BRR3 403 aa10.85□□□□□ -0.67
NEK1-201ENST00000439128 CPNE5Q9HCH3 593 aa10.85□□□□□ -0.67
NEK1-201ENST00000439128 NTMQ9P121 344 aa10.85□□□□□ -0.67
NEK1-201ENST00000439128 FCARP24071 287 aa10.85□□□□□ -0.67
NEK1-201ENST00000439128 NPY4RP50391 375 aa10.85□□□□□ -0.67
NEK1-201ENST00000439128 ZNF74Q16587 644 aa10.85□□□□□ -0.67
NEK1-201ENST00000439128 PDZD9Q8IXQ8 264 aa10.85□□□□□ -0.67
NEK1-201ENST00000439128 SMAP2Q8WU79 429 aaPredicted RBP10.85□□□□□ -0.67
NEK1-201ENST00000439128 SIGLEC11Q96RL6 698 aa10.85□□□□□ -0.67
NEK1-201ENST00000439128 TMEM82A0PJX8 343 aa10.85□□□□□ -0.67
NEK1-201ENST00000439128 K7EQM0 130 aa10.85□□□□□ -0.67
NEK1-201ENST00000439128 F2RL2O00254 374 aa10.85□□□□□ -0.67
NEK1-201ENST00000439128 PATE4P0C8F1 98 aa10.85□□□□□ -0.67
NEK1-201ENST00000439128 T-ENOLP0DO92 83 aa10.85□□□□□ -0.67
NEK1-201ENST00000439128 SNRPGP62308 76 aaKnown RBP10.85□□□□□ -0.67
NEK1-201ENST00000439128 OR8G2PQ6IF36 304 aa10.85□□□□□ -0.67
NEK1-201ENST00000439128 FAHD2BQ6P2I3 314 aaPredicted RBP10.85□□□□□ -0.67
NEK1-201ENST00000439128 TMEM217Q8N7C4 229 aa10.85□□□□□ -0.67
NEK1-201ENST00000439128 ARAP2Q8WZ64 1704 aa10.85□□□□□ -0.67
NEK1-201ENST00000439128 ARL11Q969Q4 196 aa10.85□□□□□ -0.67
NEK1-201ENST00000439128 FAHD2AQ96GK7 314 aa10.85□□□□□ -0.67
NEK1-201ENST00000439128 UHRF2Q96PU4 802 aa10.85□□□□□ -0.67
NEK1-201ENST00000439128 MS4A7Q9GZW8 240 aaPredicted RBP10.85□□□□□ -0.67
NEK1-201ENST00000439128 SLC22A13Q9Y226 551 aa10.85□□□□□ -0.67
NEK1-201ENST00000439128 RAXQ9Y2V3 346 aa10.85□□□□□ -0.67
NEK1-201ENST00000439128 LAMB2P55268 1798 aa10.85□□□□□ -0.67
NEK1-201ENST00000439128 MAGEB4O15481 346 aaPredicted RBP10.84□□□□□ -0.67
NEK1-201ENST00000439128 CT62P0C5K7 136 aa10.84□□□□□ -0.67
NEK1-201ENST00000439128 OR10J4P0C629 311 aa10.84□□□□□ -0.67
NEK1-201ENST00000439128 FOXL2P58012 376 aa10.84□□□□□ -0.67
NEK1-201ENST00000439128 MLF1P58340 268 aa10.84□□□□□ -0.67
NEK1-201ENST00000439128 RAP2BP61225 183 aa10.84□□□□□ -0.67
NEK1-201ENST00000439128 EGR3Q06889 387 aa10.84□□□□□ -0.67
NEK1-201ENST00000439128 TSEN54Q7Z6J9 526 aaKnown RBP10.84□□□□□ -0.67
NEK1-201ENST00000439128 MOB3AQ96BX8 217 aa10.84□□□□□ -0.67
NEK1-201ENST00000439128 SLC38A1Q9H2H9 487 aa10.84□□□□□ -0.67
NEK1-201ENST00000439128 ST3GAL6Q9Y274 331 aa10.84□□□□□ -0.67
NEK1-201ENST00000439128 COL5A3P25940 1745 aaPredicted RBP10.84□□□□□ -0.67
NEK1-201ENST00000439128 HMX2A2RU54 273 aa10.84□□□□□ -0.67
NEK1-201ENST00000439128 I3L521 148 aa10.84□□□□□ -0.67
NEK1-201ENST00000439128 AADACL4Q5VUY2 407 aa10.84□□□□□ -0.67
NEK1-201ENST00000439128 NPEPL1Q8NDH3 523 aa10.84□□□□□ -0.67
NEK1-201ENST00000439128 RHNO1Q9BSD3 238 aa10.84□□□□□ -0.67
NEK1-201ENST00000439128 COL24A1Q17RW2 1714 aa10.84□□□□□ -0.67
NEK1-201ENST00000439128 ARPC3O15145 178 aa10.84□□□□□ -0.67
NEK1-201ENST00000439128 SPDEFO95238 335 aa10.84□□□□□ -0.67
NEK1-201ENST00000439128 CHRM2P08172 466 aa10.84□□□□□ -0.67
NEK1-201ENST00000439128 GNB3P16520 340 aa10.84□□□□□ -0.67
NEK1-201ENST00000439128 BMI1P35226 326 aa10.84□□□□□ -0.67
NEK1-201ENST00000439128 DDOSTP39656 456 aa10.84□□□□□ -0.67
NEK1-201ENST00000439128 CD96P40200 585 aa10.84□□□□□ -0.67
NEK1-201ENST00000439128 NPBWR1P48145 328 aa10.84□□□□□ -0.67
NEK1-201ENST00000439128 SSTP61278 116 aa10.84□□□□□ -0.67
NEK1-201ENST00000439128 GNG3P63215 75 aa10.84□□□□□ -0.67
NEK1-201ENST00000439128 ACSM1Q08AH1 577 aa10.84□□□□□ -0.67
NEK1-201ENST00000439128 KDM4DQ6B0I6 523 aa10.84□□□□□ -0.67
NEK1-201ENST00000439128 GALMQ96C23 342 aa10.84□□□□□ -0.67
NEK1-201ENST00000439128 AADACP22760 399 aa10.84□□□□□ -0.67
NEK1-201ENST00000439128 CSN1S1P47710 185 aa10.84□□□□□ -0.67
NEK1-201ENST00000439128 FMODQ06828 376 aa10.84□□□□□ -0.67
NEK1-201ENST00000439128 TPBGQ13641 420 aa10.84□□□□□ -0.67
NEK1-201ENST00000439128 SLC17A1Q14916 467 aa10.84□□□□□ -0.67
NEK1-201ENST00000439128 MCHR2Q969V1 340 aa10.84□□□□□ -0.67
NEK1-201ENST00000439128 EID2BQ96D98 161 aa10.84□□□□□ -0.67
NEK1-201ENST00000439128 ETV7Q9Y603 341 aa10.84□□□□□ -0.67
NEK1-201ENST00000439128 KCNMB2Q9Y691 235 aa10.84□□□□□ -0.67
NEK1-201ENST00000439128 LAMA4Q16363 1823 aa10.84□□□□□ -0.67
NEK1-201ENST00000439128 AGPAT2O15120 278 aa10.84□□□□□ -0.67
NEK1-201ENST00000439128 RAC3P60763 192 aa10.84□□□□□ -0.67
NEK1-201ENST00000439128 MAFIPQ8WZ33 124 aa10.84□□□□□ -0.67
NEK1-201ENST00000439128 C4orf45Q96LM5 186 aa10.84□□□□□ -0.67
NEK1-201ENST00000439128 LRFN5Q96NI6 719 aa10.84□□□□□ -0.67
NEK1-201ENST00000439128 MMP28Q9H239 520 aa10.84□□□□□ -0.67
NEK1-201ENST00000439128 A0A1B0GUH1 482 aa10.83□□□□□ -0.68
NEK1-201ENST00000439128 FITM1A5D6W6 292 aa10.83□□□□□ -0.68
NEK1-201ENST00000439128 PRAF2O60831 178 aa10.83□□□□□ -0.68
NEK1-201ENST00000439128 CD160O95971 181 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 82.6 ms