RNA–Protein interactions for RNA: ENST00000439027.1

AC011228.1-201, humanhuman

TSL 1 (best) BASIC

Gene AC011228.1, Length 757 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC011228.1-201ENST00000439027 TREM2Q9NZC2 230 aa7.87□□□□□ -1.15
AC011228.1-201ENST00000439027 CNOT2Q9NZN8 540 aaKnown RBP7.87□□□□□ -1.15
AC011228.1-201ENST00000439027 MYEF2Q9P2K5 600 aaKnown RBP7.87□□□□□ -1.15
AC011228.1-201ENST00000439027 SELENOFO60613 162 aa7.86□□□□□ -1.15
AC011228.1-201ENST00000439027 MPZL1O95297 269 aa7.86□□□□□ -1.15
AC011228.1-201ENST00000439027 FARS2O95363 451 aaKnown RBP7.86□□□□□ -1.15
AC011228.1-201ENST00000439027 FADS2O95864 444 aaKnown RBP7.86□□□□□ -1.15
AC011228.1-201ENST00000439027 TFP02787 698 aa7.86□□□□□ -1.15
AC011228.1-201ENST00000439027 MT-ND2P03891 347 aa7.86□□□□□ -1.15
AC011228.1-201ENST00000439027 SERPINA5P05154 406 aa7.86□□□□□ -1.15
AC011228.1-201ENST00000439027 LCKP06239 509 aa7.86□□□□□ -1.15
AC011228.1-201ENST00000439027 CDK1P06493 297 aa7.86□□□□□ -1.15
AC011228.1-201ENST00000439027 HTR1AP08908 422 aa7.86□□□□□ -1.15
AC011228.1-201ENST00000439027 FAM157BP0CG42 384 aa7.86□□□□□ -1.15
AC011228.1-201ENST00000439027 PIPP12273 146 aaPredicted RBP7.86□□□□□ -1.15
AC011228.1-201ENST00000439027 CCL2P13500 99 aa7.86□□□□□ -1.15
AC011228.1-201ENST00000439027 LAP3P28838 519 aa7.86□□□□□ -1.15
AC011228.1-201ENST00000439027 C21orf33P30042 268 aaPredicted RBP7.86□□□□□ -1.15
AC011228.1-201ENST00000439027 CDAP32320 146 aa7.86□□□□□ -1.15
AC011228.1-201ENST00000439027 GUCA1AP43080 201 aaPredicted RBP7.86□□□□□ -1.15
AC011228.1-201ENST00000439027 ZNF84P51523 738 aa7.86□□□□□ -1.15
AC011228.1-201ENST00000439027 ZNF133P52736 654 aaPredicted RBP7.86□□□□□ -1.15
AC011228.1-201ENST00000439027 BLVRAP53004 296 aa7.86□□□□□ -1.15
AC011228.1-201ENST00000439027 HCCSP53701 268 aa7.86□□□□□ -1.15
AC011228.1-201ENST00000439027 TMEM33P57088 247 aa7.86□□□□□ -1.15
AC011228.1-201ENST00000439027 GABARAPL2P60520 117 aa7.86□□□□□ -1.15
AC011228.1-201ENST00000439027 MVKQ03426 396 aa7.86□□□□□ -1.15
AC011228.1-201ENST00000439027 SGCAQ16586 387 aa7.86□□□□□ -1.15
AC011228.1-201ENST00000439027 MEP1BQ16820 701 aa7.86□□□□□ -1.15
AC011228.1-201ENST00000439027 C10orf128Q5T292 105 aa7.86□□□□□ -1.15
AC011228.1-201ENST00000439027 SAMD5Q5TGI4 173 aa7.86□□□□□ -1.15
AC011228.1-201ENST00000439027 RGS7BPQ6MZT1 257 aaPredicted RBP7.86□□□□□ -1.15
AC011228.1-201ENST00000439027 TMEM154Q6P9G4 183 aa7.86□□□□□ -1.15
AC011228.1-201ENST00000439027 SLC16A14Q7RTX9 510 aa7.86□□□□□ -1.15
AC011228.1-201ENST00000439027 ERI1Q8IV48 349 aaKnown RBP7.86□□□□□ -1.15
AC011228.1-201ENST00000439027 SLC30A7Q8NEW0 376 aa7.86□□□□□ -1.15
AC011228.1-201ENST00000439027 CLDND2Q8NHS1 167 aa7.86□□□□□ -1.15
AC011228.1-201ENST00000439027 TMEM80Q96HE8 168 aa7.86□□□□□ -1.15
AC011228.1-201ENST00000439027 INTS14Q96SY0 518 aa7.86□□□□□ -1.15
AC011228.1-201ENST00000439027 CNN2Q99439 309 aaKnown RBP7.86□□□□□ -1.15
AC011228.1-201ENST00000439027 TBX5Q99593 518 aa7.86□□□□□ -1.15
AC011228.1-201ENST00000439027 METTL17Q9H7H0 456 aaPredicted RBP7.86□□□□□ -1.15
AC011228.1-201ENST00000439027 WDR76Q9H967 626 aa7.86□□□□□ -1.15
AC011228.1-201ENST00000439027 ADGRL4Q9HBW9 690 aa7.86□□□□□ -1.15
AC011228.1-201ENST00000439027 FGF20Q9NP95 211 aaPredicted RBP7.86□□□□□ -1.15
AC011228.1-201ENST00000439027 CCNB1IP1Q9NPC3 277 aa7.86□□□□□ -1.15
AC011228.1-201ENST00000439027 MRPS18AQ9NVS2 196 aaKnown RBP7.86□□□□□ -1.15
AC011228.1-201ENST00000439027 HIF1ANQ9NWT6 349 aa7.86□□□□□ -1.15
AC011228.1-201ENST00000439027 ZNF224Q9NZL3 707 aa7.86□□□□□ -1.15
AC011228.1-201ENST00000439027 TAAR3PQ9P1P4 343 aa7.86□□□□□ -1.15
AC011228.1-201ENST00000439027 GPR160Q9UJ42 338 aa7.86□□□□□ -1.15
AC011228.1-201ENST00000439027 EXOGQ9Y2C4 368 aaKnown RBP7.86□□□□□ -1.15
AC011228.1-201ENST00000439027 COMMD3-BMI1R4GMX3 469 aa7.86□□□□□ -1.15
AC011228.1-201ENST00000439027 MGAM2Q2M2H8 2515 aa7.85□□□□□ -1.15
AC011228.1-201ENST00000439027 A0A087WXM4 84 aa7.85□□□□□ -1.15
AC011228.1-201ENST00000439027 IRGMA1A4Y4 181 aa7.85□□□□□ -1.15
AC011228.1-201ENST00000439027 FAM157AC9JC47 383 aa7.85□□□□□ -1.15
AC011228.1-201ENST00000439027 ZNF593O00488 134 aaPredicted RBP7.85□□□□□ -1.15
AC011228.1-201ENST00000439027 WNT9BO14905 357 aa7.85□□□□□ -1.15
AC011228.1-201ENST00000439027 TPD52L2O43399 206 aaKnown RBP7.85□□□□□ -1.15
AC011228.1-201ENST00000439027 CDC14BO60729 498 aa7.85□□□□□ -1.15
AC011228.1-201ENST00000439027 NCR1O76036 304 aa7.85□□□□□ -1.15
AC011228.1-201ENST00000439027 CLPTM1O96005 669 aa7.85□□□□□ -1.15
AC011228.1-201ENST00000439027 SCG5P05408 212 aa7.85□□□□□ -1.15
AC011228.1-201ENST00000439027 SBK2P0C263 348 aa7.85□□□□□ -1.15
AC011228.1-201ENST00000439027 ATP6V1B1P15313 513 aa7.85□□□□□ -1.15
AC011228.1-201ENST00000439027 ACHEP22303 614 aa7.85□□□□□ -1.15
AC011228.1-201ENST00000439027 DCKP27707 260 aa7.85□□□□□ -1.15
AC011228.1-201ENST00000439027 HSF2Q03933 536 aa7.85□□□□□ -1.15
AC011228.1-201ENST00000439027 PLP2Q04941 152 aa7.85□□□□□ -1.15
AC011228.1-201ENST00000439027 SLC36A2Q495M3 483 aa7.85□□□□□ -1.15
AC011228.1-201ENST00000439027 ZNF773Q6PK81 442 aa7.85□□□□□ -1.15
AC011228.1-201ENST00000439027 SLC16A9Q7RTY1 509 aa7.85□□□□□ -1.15
AC011228.1-201ENST00000439027 PRSS48Q7RTY5 328 aa7.85□□□□□ -1.15
AC011228.1-201ENST00000439027 ZNF584Q8IVC4 421 aa7.85□□□□□ -1.15
AC011228.1-201ENST00000439027 SLC35F2Q8IXU6 374 aa7.85□□□□□ -1.15
AC011228.1-201ENST00000439027 TIGD4Q8IY51 512 aa7.85□□□□□ -1.15
AC011228.1-201ENST00000439027 PAQR4Q8N4S7 273 aaPredicted RBP7.85□□□□□ -1.15
AC011228.1-201ENST00000439027 SLC26A10Q8NG04 563 aa7.85□□□□□ -1.15
AC011228.1-201ENST00000439027 OR10H4Q8NGA5 316 aa7.85□□□□□ -1.15
AC011228.1-201ENST00000439027 OR1J2Q8NGS2 313 aa7.85□□□□□ -1.15
AC011228.1-201ENST00000439027 SYNPRQ8TBG9 265 aa7.85□□□□□ -1.15
AC011228.1-201ENST00000439027 SNX33Q8WV41 574 aa7.85□□□□□ -1.15
AC011228.1-201ENST00000439027 C11orf40Q8WZ69 217 aa7.85□□□□□ -1.15
AC011228.1-201ENST00000439027 YIPF5Q969M3 257 aa7.85□□□□□ -1.15
AC011228.1-201ENST00000439027 TMEM186Q96B77 213 aa7.85□□□□□ -1.15
AC011228.1-201ENST00000439027 ZNF416Q9BWM5 594 aa7.85□□□□□ -1.15
AC011228.1-201ENST00000439027 MARCH7Q9H992 704 aa7.85□□□□□ -1.15
AC011228.1-201ENST00000439027 EMC7Q9NPA0 242 aa7.85□□□□□ -1.15
AC011228.1-201ENST00000439027 POLE4Q9NR33 117 aa7.85□□□□□ -1.15
AC011228.1-201ENST00000439027 ZNF275Q9NSD4 429 aaPredicted RBP7.85□□□□□ -1.15
AC011228.1-201ENST00000439027 TMEM38BQ9NVV0 291 aa7.85□□□□□ -1.15
AC011228.1-201ENST00000439027 MRPL22Q9NWU5 206 aaKnown RBP7.85□□□□□ -1.15
AC011228.1-201ENST00000439027 DIMT1Q9UNQ2 313 aaKnown RBP7.85□□□□□ -1.15
AC011228.1-201ENST00000439027 GRIP1Q9Y3R0 1128 aa7.85□□□□□ -1.15
AC011228.1-201ENST00000439027 UGT2A1Q9Y4X1 527 aa7.85□□□□□ -1.15
AC011228.1-201ENST00000439027 PCDHGB1Q9Y5G3 927 aa7.85□□□□□ -1.15
AC011228.1-201ENST00000439027 SNX5Q9Y5X3 404 aa7.85□□□□□ -1.15
AC011228.1-201ENST00000439027 IQCMA0A1B0GVH7 501 aa7.84□□□□□ -1.15
AC011228.1-201ENST00000439027 DAPL1A0PJW8 107 aa7.84□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms