RNA–Protein interactions for RNA: ENST00000438594.2

HMGB1P12-201, Transcript of high mobility group box 1 pseudogene 12, humanhuman

BASIC

Gene HMGB1P12, Length 598 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P12-201ENST00000438594 TSC22D3Q99576 134 aa3.01□□□□□ -1.93
HMGB1P12-201ENST00000438594 OSBPL11Q9BXB4 747 aa3.01□□□□□ -1.93
HMGB1P12-201ENST00000438594 MAP1LC3AQ9H492 121 aa3.01□□□□□ -1.93
HMGB1P12-201ENST00000438594 UGT1A8Q9HAW9 530 aa3.01□□□□□ -1.93
HMGB1P12-201ENST00000438594 NMUR1Q9HB89 426 aa3.01□□□□□ -1.93
HMGB1P12-201ENST00000438594 UBE2TQ9NPD8 197 aaPredicted RBP3.01□□□□□ -1.93
HMGB1P12-201ENST00000438594 IL1RAPQ9NPH3 570 aa3.01□□□□□ -1.93
HMGB1P12-201ENST00000438594 NUDT4Q9NZJ9 180 aa3.01□□□□□ -1.93
HMGB1P12-201ENST00000438594 OR52A1Q9UKL2 312 aa3.01□□□□□ -1.93
HMGB1P12-201ENST00000438594 RALYQ9UKM9 306 aaKnown RBP3.01□□□□□ -1.93
HMGB1P12-201ENST00000438594 KCNS2Q9ULS6 477 aa3.01□□□□□ -1.93
HMGB1P12-201ENST00000438594 COPS3Q9UNS2 423 aa3.01□□□□□ -1.93
HMGB1P12-201ENST00000438594 TP53TG1Q9Y2A0 90 aa3.01□□□□□ -1.93
HMGB1P12-201ENST00000438594 FAM32AQ9Y421 112 aaKnown RBP3.01□□□□□ -1.93
HMGB1P12-201ENST00000438594 KLF12Q9Y4X4 402 aa3.01□□□□□ -1.93
HMGB1P12-201ENST00000438594 CPQQ9Y646 472 aa3.01□□□□□ -1.93
HMGB1P12-201ENST00000438594 NCAPD3P42695 1498 aa3.01□□□□□ -1.93
HMGB1P12-201ENST00000438594 CENPVL3A0A0U1RRI6 287 aa3□□□□□ -1.93
HMGB1P12-201ENST00000438594 A0A1B0GV90 55 aa3□□□□□ -1.93
HMGB1P12-201ENST00000438594 IGLON5A6NGN9 336 aa3□□□□□ -1.93
HMGB1P12-201ENST00000438594 F8W036 122 aa3□□□□□ -1.93
HMGB1P12-201ENST00000438594 CRXO43186 299 aaPredicted RBP3□□□□□ -1.93
HMGB1P12-201ENST00000438594 CST8O60676 142 aa3□□□□□ -1.93
HMGB1P12-201ENST00000438594 RP2O75695 350 aa3□□□□□ -1.93
HMGB1P12-201ENST00000438594 OR2B3O76000 313 aa3□□□□□ -1.93
HMGB1P12-201ENST00000438594 VENTXO95231 258 aa3□□□□□ -1.93
HMGB1P12-201ENST00000438594 TBX6O95947 436 aaPredicted RBP3□□□□□ -1.93
HMGB1P12-201ENST00000438594 HAND1O96004 215 aa3□□□□□ -1.93
HMGB1P12-201ENST00000438594 IGHV2-5P01817 119 aa3□□□□□ -1.93
HMGB1P12-201ENST00000438594 RPLP0P05388 317 aaKnown RBP3□□□□□ -1.93
HMGB1P12-201ENST00000438594 PVRP15151 417 aa3□□□□□ -1.93
HMGB1P12-201ENST00000438594 GZMHP20718 246 aa3□□□□□ -1.93
HMGB1P12-201ENST00000438594 F8A1P23610 371 aa3□□□□□ -1.93
HMGB1P12-201ENST00000438594 IL12AP29459 219 aa3□□□□□ -1.93
HMGB1P12-201ENST00000438594 PTGDSP41222 190 aa3□□□□□ -1.93
HMGB1P12-201ENST00000438594 ZFP36L2P47974 494 aaKnown RBP3□□□□□ -1.93
HMGB1P12-201ENST00000438594 SRP9P49458 86 aaKnown RBP3□□□□□ -1.93
HMGB1P12-201ENST00000438594 RAB7AP51149 207 aa3□□□□□ -1.93
HMGB1P12-201ENST00000438594 VSX2P58304 361 aaPredicted RBP3□□□□□ -1.93
HMGB1P12-201ENST00000438594 TAS2R41P59536 307 aa3□□□□□ -1.93
HMGB1P12-201ENST00000438594 SNAP25P60880 206 aa3□□□□□ -1.93
HMGB1P12-201ENST00000438594 STXBP1P61764 594 aaKnown RBP3□□□□□ -1.93
HMGB1P12-201ENST00000438594 ESRRGP62508 458 aa3□□□□□ -1.93
HMGB1P12-201ENST00000438594 HSF1Q00613 529 aa3□□□□□ -1.93
HMGB1P12-201ENST00000438594 MS4A2Q01362 244 aa3□□□□□ -1.93
HMGB1P12-201ENST00000438594 TGFBR3Q03167 851 aa3□□□□□ -1.93
HMGB1P12-201ENST00000438594 ARL16Q0P5N6 197 aa3□□□□□ -1.93
HMGB1P12-201ENST00000438594 ST3GAL4Q11206 333 aa3□□□□□ -1.93
HMGB1P12-201ENST00000438594 GAGE1Q13065 139 aa3□□□□□ -1.93
HMGB1P12-201ENST00000438594 FAM53BQ14153 422 aa3□□□□□ -1.93
HMGB1P12-201ENST00000438594 TMEM187Q14656 261 aa3□□□□□ -1.93
HMGB1P12-201ENST00000438594 PTGR1Q14914 329 aa3□□□□□ -1.93
HMGB1P12-201ENST00000438594 ATP6AP1Q15904 470 aa3□□□□□ -1.93
HMGB1P12-201ENST00000438594 TTLL9Q3SXZ7 439 aa3□□□□□ -1.93
HMGB1P12-201ENST00000438594 FAM106AQ4KMX7 169 aa3□□□□□ -1.93
HMGB1P12-201ENST00000438594 DCST2Q5T1A1 773 aa3□□□□□ -1.93
HMGB1P12-201ENST00000438594 FAM27D1Q5T7N8 215 aa3□□□□□ -1.93
HMGB1P12-201ENST00000438594 ATP1A1-AS1Q5TC04 95 aa3□□□□□ -1.93
HMGB1P12-201ENST00000438594 FHL5Q5TD97 284 aa3□□□□□ -1.93
HMGB1P12-201ENST00000438594 CST9Q5W186 159 aa3□□□□□ -1.93
HMGB1P12-201ENST00000438594 HBMQ6B0K9 141 aa3□□□□□ -1.93
HMGB1P12-201ENST00000438594 ZNF774Q6NX45 483 aa3□□□□□ -1.93
HMGB1P12-201ENST00000438594 WDR82Q6UXN9 313 aa3□□□□□ -1.93
HMGB1P12-201ENST00000438594 Q6ZSV7 163 aa3□□□□□ -1.93
HMGB1P12-201ENST00000438594 OLIG3Q7RTU3 272 aa3□□□□□ -1.93
HMGB1P12-201ENST00000438594 PRSS41Q7RTY9 318 aa3□□□□□ -1.93
HMGB1P12-201ENST00000438594 IFNEQ86WN2 208 aa3□□□□□ -1.93
HMGB1P12-201ENST00000438594 CBLN2Q8IUK8 224 aa3□□□□□ -1.93
HMGB1P12-201ENST00000438594 CCDC71Q8IV32 467 aaPredicted RBP3□□□□□ -1.93
HMGB1P12-201ENST00000438594 APLFQ8IW19 511 aaPredicted RBP3□□□□□ -1.93
HMGB1P12-201ENST00000438594 PIANPQ8IYJ0 282 aa3□□□□□ -1.93
HMGB1P12-201ENST00000438594 RNF113BQ8IZP6 322 aaKnown RBP3□□□□□ -1.93
HMGB1P12-201ENST00000438594 LRRC25Q8N386 305 aaPredicted RBP3□□□□□ -1.93
HMGB1P12-201ENST00000438594 STX19Q8N4C7 294 aa3□□□□□ -1.93
HMGB1P12-201ENST00000438594 TMEM199Q8N511 208 aa3□□□□□ -1.93
HMGB1P12-201ENST00000438594 SLC26A10Q8NG04 563 aa3□□□□□ -1.93
HMGB1P12-201ENST00000438594 OR8G5Q8NG78 346 aa3□□□□□ -1.93
HMGB1P12-201ENST00000438594 OR10G3Q8NGC4 313 aa3□□□□□ -1.93
HMGB1P12-201ENST00000438594 OR1K1Q8NGR3 316 aa3□□□□□ -1.93
HMGB1P12-201ENST00000438594 OR56B4Q8NH76 319 aa3□□□□□ -1.93
HMGB1P12-201ENST00000438594 COQ8AQ8NI60 647 aa3□□□□□ -1.93
HMGB1P12-201ENST00000438594 DOK4Q8TEW6 326 aa3□□□□□ -1.93
HMGB1P12-201ENST00000438594 Q8WTZ3 238 aa3□□□□□ -1.93
HMGB1P12-201ENST00000438594 PYROXD1Q8WU10 500 aa3□□□□□ -1.93
HMGB1P12-201ENST00000438594 TMBIM1Q969X1 311 aa3□□□□□ -1.93
HMGB1P12-201ENST00000438594 ANKRD36BP1Q96IX9 119 aa3□□□□□ -1.93
HMGB1P12-201ENST00000438594 HSFY1Q96LI6 401 aa3□□□□□ -1.93
HMGB1P12-201ENST00000438594 DUX3Q96PT4 197 aa3□□□□□ -1.93
HMGB1P12-201ENST00000438594 NODALQ96S42 347 aa3□□□□□ -1.93
HMGB1P12-201ENST00000438594 SORT1Q99523 831 aa3□□□□□ -1.93
HMGB1P12-201ENST00000438594 P2RX4Q99571 388 aa3□□□□□ -1.93
HMGB1P12-201ENST00000438594 RASL11BQ9BPW5 248 aa3□□□□□ -1.93
HMGB1P12-201ENST00000438594 PDCD1LG2Q9BQ51 273 aa3□□□□□ -1.93
HMGB1P12-201ENST00000438594 HES7Q9BYE0 225 aa3□□□□□ -1.93
HMGB1P12-201ENST00000438594 SPNS1Q9H2V7 528 aa3□□□□□ -1.93
HMGB1P12-201ENST00000438594 ZSCAN16Q9H4T2 348 aaPredicted RBP3□□□□□ -1.93
HMGB1P12-201ENST00000438594 METTL17Q9H7H0 456 aaPredicted RBP3□□□□□ -1.93
HMGB1P12-201ENST00000438594 MEPEQ9NQ76 525 aaPredicted RBP3□□□□□ -1.93
HMGB1P12-201ENST00000438594 TMEM30AQ9NV96 361 aa3□□□□□ -1.93
HMGB1P12-201ENST00000438594 C19orf25Q9UFG5 118 aaPredicted RBP3□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms