RNA–Protein interactions for RNA: ENST00000437600.8

CUX1-206, Transcript of cut like homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene CUX1, Length 3,031 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-206ENST00000437600 DDIT4LQ96D03 193 aa8.4□□□□□ -1.07
CUX1-206ENST00000437600 SEH1LQ96EE3 360 aa8.4□□□□□ -1.07
CUX1-206ENST00000437600 ZNF837Q96EG3 531 aaPredicted RBP8.4□□□□□ -1.07
CUX1-206ENST00000437600 SEC22AQ96IW7 307 aa8.4□□□□□ -1.07
CUX1-206ENST00000437600 RBP7Q96R05 134 aa8.4□□□□□ -1.07
CUX1-206ENST00000437600 MNTQ99583 582 aa8.4□□□□□ -1.07
CUX1-206ENST00000437600 SLC26A1Q9H2B4 701 aa8.4□□□□□ -1.07
CUX1-206ENST00000437600 BANF2Q9H503 90 aa8.4□□□□□ -1.07
CUX1-206ENST00000437600 EXO5Q9H790 373 aa8.4□□□□□ -1.07
CUX1-206ENST00000437600 SDHAF3Q9NRP4 125 aa8.4□□□□□ -1.07
CUX1-206ENST00000437600 WIF1Q9Y5W5 379 aa8.4□□□□□ -1.07
CUX1-206ENST00000437600 BET1O15155 118 aa8.39□□□□□ -1.07
CUX1-206ENST00000437600 NUPL2O15504 423 aaKnown RBP8.39□□□□□ -1.07
CUX1-206ENST00000437600 ECDO95905 644 aaPredicted RBP8.39□□□□□ -1.07
CUX1-206ENST00000437600 MT-CO3P00414 261 aa8.39□□□□□ -1.07
CUX1-206ENST00000437600 IGF2P01344 180 aa8.39□□□□□ -1.07
CUX1-206ENST00000437600 TTRP02766 147 aa8.39□□□□□ -1.07
CUX1-206ENST00000437600 FTH1P19P0C7X4 201 aa8.39□□□□□ -1.07
CUX1-206ENST00000437600 GNB3P16520 340 aa8.39□□□□□ -1.07
CUX1-206ENST00000437600 CXCL2P19875 107 aa8.39□□□□□ -1.07
CUX1-206ENST00000437600 NUBP1P53384 320 aa8.39□□□□□ -1.07
CUX1-206ENST00000437600 CLRN1P58418 232 aa8.39□□□□□ -1.07
CUX1-206ENST00000437600 AP3S2P59780 193 aa8.39□□□□□ -1.07
CUX1-206ENST00000437600 ROM1Q03395 351 aa8.39□□□□□ -1.07
CUX1-206ENST00000437600 Q3ZCU0 254 aa8.39□□□□□ -1.07
CUX1-206ENST00000437600 C11orf88Q6PI97 169 aa8.39□□□□□ -1.07
CUX1-206ENST00000437600 DTX1Q86Y01 620 aa8.39□□□□□ -1.07
CUX1-206ENST00000437600 ZNF565Q8N9K5 539 aa8.39□□□□□ -1.07
CUX1-206ENST00000437600 OR2Y1Q8NGV0 311 aa8.39□□□□□ -1.07
CUX1-206ENST00000437600 ELP5Q8TE02 316 aa8.39□□□□□ -1.07
CUX1-206ENST00000437600 FBXW5Q969U6 566 aa8.39□□□□□ -1.07
CUX1-206ENST00000437600 ELMOD3Q96FG2 381 aa8.39□□□□□ -1.07
CUX1-206ENST00000437600 GPR137Q96N19 417 aa8.39□□□□□ -1.07
CUX1-206ENST00000437600 NICN1Q9BSH3 213 aa8.39□□□□□ -1.07
CUX1-206ENST00000437600 MFRPQ9BY79 579 aa8.39□□□□□ -1.07
CUX1-206ENST00000437600 PADI1Q9ULC6 663 aa8.39□□□□□ -1.07
CUX1-206ENST00000437600 RP1L1Q8IWN7 2480 aaPredicted RBP8.39□□□□□ -1.07
CUX1-206ENST00000437600 FXYD6-FXYD2A0A087WZ82 144 aa8.39□□□□□ -1.07
CUX1-206ENST00000437600 F5H5K5 113 aa8.39□□□□□ -1.07
CUX1-206ENST00000437600 STMND1H3BQB6 276 aa8.39□□□□□ -1.07
CUX1-206ENST00000437600 CCSO14618 274 aa8.39□□□□□ -1.07
CUX1-206ENST00000437600 GOSR2O14653 212 aa8.39□□□□□ -1.07
CUX1-206ENST00000437600 TOR1AO14656 332 aa8.39□□□□□ -1.07
CUX1-206ENST00000437600 ST8SIA5O15466 376 aa8.39□□□□□ -1.07
CUX1-206ENST00000437600 SYT7O43581 403 aa8.39□□□□□ -1.07
CUX1-206ENST00000437600 NDUFB6O95139 128 aa8.39□□□□□ -1.07
CUX1-206ENST00000437600 WDPCPO95876 746 aa8.39□□□□□ -1.07
CUX1-206ENST00000437600 AMY2AP04746 511 aa8.39□□□□□ -1.07
CUX1-206ENST00000437600 QDPRP09417 244 aa8.39□□□□□ -1.07
CUX1-206ENST00000437600 APOBEC1P41238 236 aaKnown RBP8.39□□□□□ -1.07
CUX1-206ENST00000437600 FOLR3P41439 243 aa8.39□□□□□ -1.07
CUX1-206ENST00000437600 PLPPR5Q32ZL2 321 aa8.39□□□□□ -1.07
CUX1-206ENST00000437600 BEX5Q5H9J7 111 aa8.39□□□□□ -1.07
CUX1-206ENST00000437600 GLT8D1Q68CQ7 371 aa8.39□□□□□ -1.07
CUX1-206ENST00000437600 STEAP1BQ6NZ63 245 aa8.39□□□□□ -1.07
CUX1-206ENST00000437600 TMEM81Q6P7N7 255 aa8.39□□□□□ -1.07
CUX1-206ENST00000437600 ABHD12BQ7Z5M8 362 aaPredicted RBP8.39□□□□□ -1.07
CUX1-206ENST00000437600 MFSD8Q8NHS3 518 aa8.39□□□□□ -1.07
CUX1-206ENST00000437600 TNFAIP8L1Q8WVP5 186 aa8.39□□□□□ -1.07
CUX1-206ENST00000437600 ASB17Q8WXJ9 295 aa8.39□□□□□ -1.07
CUX1-206ENST00000437600 FXYD6Q9H0Q3 95 aa8.39□□□□□ -1.07
CUX1-206ENST00000437600 PPA2Q9H2U2 334 aa8.39□□□□□ -1.07
CUX1-206ENST00000437600 NPDC1Q9NQX5 325 aaPredicted RBP8.39□□□□□ -1.07
CUX1-206ENST00000437600 AUP1Q9Y679 476 aa8.39□□□□□ -1.07
CUX1-206ENST00000437600 CHCHD2Q9Y6H1 151 aaPredicted RBP8.39□□□□□ -1.07
CUX1-206ENST00000437600 R4GMQ9 66 aa8.39□□□□□ -1.07
CUX1-206ENST00000437600 C9orf172C9J069 976 aa8.38□□□□□ -1.07
CUX1-206ENST00000437600 SULT2B1O00204 365 aa8.38□□□□□ -1.07
CUX1-206ENST00000437600 NDUFA2O43678 99 aa8.38□□□□□ -1.07
CUX1-206ENST00000437600 CREBL2O60519 120 aaPredicted RBP8.38□□□□□ -1.07
CUX1-206ENST00000437600 HOXD4P09016 255 aaPredicted RBP8.38□□□□□ -1.07
CUX1-206ENST00000437600 PATE4P0C8F1 98 aa8.38□□□□□ -1.07
CUX1-206ENST00000437600 TAF13Q15543 124 aa8.38□□□□□ -1.07
CUX1-206ENST00000437600 FREM1Q5H8C1 2179 aa8.38□□□□□ -1.07
CUX1-206ENST00000437600 ANGPTL5Q86XS5 388 aa8.38□□□□□ -1.07
CUX1-206ENST00000437600 OR4K17Q8NGC6 315 aa8.38□□□□□ -1.07
CUX1-206ENST00000437600 LIN37Q96GY3 246 aaPredicted RBP8.38□□□□□ -1.07
CUX1-206ENST00000437600 IMMP1LQ96LU5 166 aa8.38□□□□□ -1.07
CUX1-206ENST00000437600 SELENOIQ9C0D9 397 aa8.38□□□□□ -1.07
CUX1-206ENST00000437600 ACTR6Q9GZN1 396 aa8.38□□□□□ -1.07
CUX1-206ENST00000437600 AKAP7Q9P0M2 348 aaPredicted RBP8.38□□□□□ -1.07
CUX1-206ENST00000437600 A0A0G2JMM0 328 aa8.38□□□□□ -1.07
CUX1-206ENST00000437600 A0A1W2PPB8 328 aa8.38□□□□□ -1.07
CUX1-206ENST00000437600 A0A1W2PRS3 328 aa8.38□□□□□ -1.07
CUX1-206ENST00000437600 KIR3DP1A8MWS1 328 aa8.38□□□□□ -1.07
CUX1-206ENST00000437600 RAB3DO95716 219 aa8.38□□□□□ -1.07
CUX1-206ENST00000437600 ZNF35P13682 527 aa8.38□□□□□ -1.07
CUX1-206ENST00000437600 ZNF43P17038 809 aa8.38□□□□□ -1.07
CUX1-206ENST00000437600 MAP2K6P52564 334 aa8.38□□□□□ -1.07
CUX1-206ENST00000437600 CLDN17P56750 224 aa8.38□□□□□ -1.07
CUX1-206ENST00000437600 PMPCAQ10713 525 aa8.38□□□□□ -1.07
CUX1-206ENST00000437600 ZNF124Q15973 351 aa8.38□□□□□ -1.07
CUX1-206ENST00000437600 HACD4Q5VWC8 232 aa8.38□□□□□ -1.07
CUX1-206ENST00000437600 ALKAL2Q6UX46 152 aa8.38□□□□□ -1.07
CUX1-206ENST00000437600 PIP4P1Q86T03 277 aa8.38□□□□□ -1.07
CUX1-206ENST00000437600 RPS19BP1Q86WX3 136 aaKnown RBP8.38□□□□□ -1.07
CUX1-206ENST00000437600 UEVLDQ8IX04 471 aa8.38□□□□□ -1.07
CUX1-206ENST00000437600 LINC00518Q8N0U6 118 aa8.38□□□□□ -1.07
CUX1-206ENST00000437600 PAQR4Q8N4S7 273 aaPredicted RBP8.38□□□□□ -1.07
CUX1-206ENST00000437600 TMEM104Q8NE00 496 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms