RNA–Protein interactions for RNA: ENST00000435455.5

SMPD4-207, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 5

Gene SMPD4, Length 842 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-207ENST00000435455 OPRL1P41146 370 aa13.76□□□□□ -0.21
SMPD4-207ENST00000435455 NAA10P41227 235 aaPredicted RBP13.76□□□□□ -0.21
SMPD4-207ENST00000435455 CX3CR1P49238 355 aa13.76□□□□□ -0.21
SMPD4-207ENST00000435455 SRP9P49458 86 aaKnown RBP13.76□□□□□ -0.21
SMPD4-207ENST00000435455 CDH15P55291 814 aa13.76□□□□□ -0.21
SMPD4-207ENST00000435455 MVKQ03426 396 aa13.76□□□□□ -0.21
SMPD4-207ENST00000435455 SNAI3Q3KNW1 292 aa13.76□□□□□ -0.21
SMPD4-207ENST00000435455 AVPI1Q5T686 147 aa13.76□□□□□ -0.21
SMPD4-207ENST00000435455 SLC16A9Q7RTY1 509 aa13.76□□□□□ -0.21
SMPD4-207ENST00000435455 HIST2H2ABQ8IUE6 130 aaPredicted RBP13.76□□□□□ -0.21
SMPD4-207ENST00000435455 TMEM163Q8TC26 289 aa13.76□□□□□ -0.21
SMPD4-207ENST00000435455 THEM6Q8WUY1 208 aa13.76□□□□□ -0.21
SMPD4-207ENST00000435455 SPRYD4Q8WW59 207 aaPredicted RBP13.76□□□□□ -0.21
SMPD4-207ENST00000435455 PKP2Q99959 881 aa13.76□□□□□ -0.21
SMPD4-207ENST00000435455 SOX7Q9BT81 388 aa13.76□□□□□ -0.21
SMPD4-207ENST00000435455 REPIN1Q9BWE0 567 aaKnown RBP13.76□□□□□ -0.21
SMPD4-207ENST00000435455 YIPF3Q9GZM5 350 aa13.76□□□□□ -0.21
SMPD4-207ENST00000435455 H2AFY2Q9P0M6 372 aaPredicted RBP13.76□□□□□ -0.21
SMPD4-207ENST00000435455 LPAR3Q9UBY5 353 aa13.76□□□□□ -0.21
SMPD4-207ENST00000435455 PPP1R3CQ9UQK1 317 aa13.76□□□□□ -0.21
SMPD4-207ENST00000435455 CD300LBA8K4G0 201 aa13.75□□□□□ -0.21
SMPD4-207ENST00000435455 B4DSR2 109 aa13.75□□□□□ -0.21
SMPD4-207ENST00000435455 H3BNX3 289 aa13.75□□□□□ -0.21
SMPD4-207ENST00000435455 PRKYO43930 277 aa13.75□□□□□ -0.21
SMPD4-207ENST00000435455 ANXA2P07355 339 aaKnown RBP13.75□□□□□ -0.21
SMPD4-207ENST00000435455 SLC2A1P11166 492 aa13.75□□□□□ -0.21
SMPD4-207ENST00000435455 EPHA2P29317 976 aa13.75□□□□□ -0.21
SMPD4-207ENST00000435455 LMO4P61968 165 aa13.75□□□□□ -0.21
SMPD4-207ENST00000435455 ZNF92Q03936 586 aa13.75□□□□□ -0.21
SMPD4-207ENST00000435455 CHRFAM7AQ494W8 412 aa13.75□□□□□ -0.21
SMPD4-207ENST00000435455 SPRNQ5BIV9 151 aa13.75□□□□□ -0.21
SMPD4-207ENST00000435455 GLYATL3Q5SZD4 288 aa13.75□□□□□ -0.21
SMPD4-207ENST00000435455 TCEANCQ8N8B7 351 aa13.75□□□□□ -0.21
SMPD4-207ENST00000435455 OR10AD1Q8NGE0 317 aa13.75□□□□□ -0.21
SMPD4-207ENST00000435455 OR52H1Q8NGJ2 320 aa13.75□□□□□ -0.21
SMPD4-207ENST00000435455 OR2AE1Q8NHA4 323 aa13.75□□□□□ -0.21
SMPD4-207ENST00000435455 RAB39BQ96DA2 213 aa13.75□□□□□ -0.21
SMPD4-207ENST00000435455 MEGF10Q96KG7 1140 aa13.75□□□□□ -0.21
SMPD4-207ENST00000435455 AMELYQ99218 206 aa13.75□□□□□ -0.21
SMPD4-207ENST00000435455 GABARAPL3Q9BY60 117 aa13.75□□□□□ -0.21
SMPD4-207ENST00000435455 SLC22A4Q9H015 551 aa13.75□□□□□ -0.21
SMPD4-207ENST00000435455 NIPAL2Q9H841 368 aa13.75□□□□□ -0.21
SMPD4-207ENST00000435455 TREM2Q9NZC2 230 aa13.75□□□□□ -0.21
SMPD4-207ENST00000435455 LAMP5Q9UJQ1 280 aa13.75□□□□□ -0.21
SMPD4-207ENST00000435455 N6AMT1Q9Y5N5 214 aa13.75□□□□□ -0.21
SMPD4-207ENST00000435455 ORC6Q9Y5N6 252 aa13.75□□□□□ -0.21
SMPD4-207ENST00000435455 TMEM14AQ9Y6G1 99 aa13.75□□□□□ -0.21
SMPD4-207ENST00000435455 CCDC182A6NF36 153 aa13.74□□□□□ -0.21
SMPD4-207ENST00000435455 GGT3PA6NGU5 568 aa13.74□□□□□ -0.21
SMPD4-207ENST00000435455 SLC22A31A6NKX4 558 aa13.74□□□□□ -0.21
SMPD4-207ENST00000435455 WNT9BO14905 357 aa13.74□□□□□ -0.21
SMPD4-207ENST00000435455 MLNRO43193 412 aa13.74□□□□□ -0.21
SMPD4-207ENST00000435455 TBX1O43435 398 aa13.74□□□□□ -0.21
SMPD4-207ENST00000435455 HNF1AP20823 631 aa13.74□□□□□ -0.21
SMPD4-207ENST00000435455 CFL1P23528 166 aaKnown RBP13.74□□□□□ -0.21
SMPD4-207ENST00000435455 DDOSTP39656 456 aa13.74□□□□□ -0.21
SMPD4-207ENST00000435455 RAD23AP54725 363 aa13.74□□□□□ -0.21
SMPD4-207ENST00000435455 PRSS12P56730 875 aa13.74□□□□□ -0.21
SMPD4-207ENST00000435455 EFNB1P98172 346 aa13.74□□□□□ -0.21
SMPD4-207ENST00000435455 TIGD6Q17RP2 521 aa13.74□□□□□ -0.21
SMPD4-207ENST00000435455 NXNL2Q5VZ03 156 aa13.74□□□□□ -0.21
SMPD4-207ENST00000435455 MEPCEQ7L2J0 689 aaKnown RBP13.74□□□□□ -0.21
SMPD4-207ENST00000435455 GID4Q8IVV7 300 aa13.74□□□□□ -0.21
SMPD4-207ENST00000435455 CELF2-AS1Q8N7Q2 184 aa13.74□□□□□ -0.21
SMPD4-207ENST00000435455 SPSB4Q96A44 273 aa13.74□□□□□ -0.21
SMPD4-207ENST00000435455 SHARPINQ9H0F6 387 aa13.74□□□□□ -0.21
SMPD4-207ENST00000435455 RIBC2Q9H4K1 309 aa13.74□□□□□ -0.21
SMPD4-207ENST00000435455 ZNF665Q9H7R5 613 aa13.74□□□□□ -0.21
SMPD4-207ENST00000435455 TMEM106BQ9NUM4 274 aa13.74□□□□□ -0.21
SMPD4-207ENST00000435455 DNAJC27Q9NZQ0 273 aa13.74□□□□□ -0.21
SMPD4-207ENST00000435455 NPTNQ9Y639 398 aa13.74□□□□□ -0.21
SMPD4-207ENST00000435455 C5orf63A6NC05 138 aa13.73□□□□□ -0.21
SMPD4-207ENST00000435455 H0YL77 283 aa13.73□□□□□ -0.21
SMPD4-207ENST00000435455 M0R129 80 aa13.73□□□□□ -0.21
SMPD4-207ENST00000435455 ANPEPP15144 967 aa13.73□□□□□ -0.21
SMPD4-207ENST00000435455 ALOX5APP20292 161 aa13.73□□□□□ -0.21
SMPD4-207ENST00000435455 PCMT1P22061 227 aa13.73□□□□□ -0.21
SMPD4-207ENST00000435455 ZNF121P58317 390 aaPredicted RBP13.73□□□□□ -0.21
SMPD4-207ENST00000435455 OR8G1Q15617 311 aa13.73□□□□□ -0.21
SMPD4-207ENST00000435455 AADACL4Q5VUY2 407 aa13.73□□□□□ -0.21
SMPD4-207ENST00000435455 KCTD18Q6PI47 426 aaPredicted RBP13.73□□□□□ -0.21
SMPD4-207ENST00000435455 DEGS2Q6QHC5 323 aa13.73□□□□□ -0.21
SMPD4-207ENST00000435455 FAM57BQ71RH2 274 aa13.73□□□□□ -0.21
SMPD4-207ENST00000435455 PRSS45Q7RTY3 260 aa13.73□□□□□ -0.21
SMPD4-207ENST00000435455 KRT77Q7Z794 578 aa13.73□□□□□ -0.21
SMPD4-207ENST00000435455 ASB17Q8WXJ9 295 aa13.73□□□□□ -0.21
SMPD4-207ENST00000435455 PGAM5Q96HS1 289 aa13.73□□□□□ -0.21
SMPD4-207ENST00000435455 IL4I1Q96RQ9 567 aa13.73□□□□□ -0.21
SMPD4-207ENST00000435455 CNN2Q99439 309 aaKnown RBP13.73□□□□□ -0.21
SMPD4-207ENST00000435455 BEX2Q9BXY8 128 aa13.73□□□□□ -0.21
SMPD4-207ENST00000435455 OR10A2Q9H208 303 aa13.73□□□□□ -0.21
SMPD4-207ENST00000435455 GCM1Q9NP62 436 aa13.73□□□□□ -0.21
SMPD4-207ENST00000435455 ANK3Q12955 4377 aaKnown RBP13.73□□□□□ -0.21
SMPD4-207ENST00000435455 MXRA5Q9NR99 2828 aa13.72□□□□□ -0.21
SMPD4-207ENST00000435455 ISPDA4D126 451 aa13.72□□□□□ -0.21
SMPD4-207ENST00000435455 F5H5P2 479 aa13.72□□□□□ -0.21
SMPD4-207ENST00000435455 GMDSO60547 372 aa13.72□□□□□ -0.21
SMPD4-207ENST00000435455 IGHV2-70P01814 119 aa13.72□□□□□ -0.21
SMPD4-207ENST00000435455 IGHV2-5P01817 119 aa13.72□□□□□ -0.21
SMPD4-207ENST00000435455 ALPLP05186 524 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms