RNA–Protein interactions for RNA: ENST00000435401.1

LINC00353-201, long intergenic non-protein coding RNA 353, humanhuman

TSL 5 BASIC

Gene LINC00353, Length 685 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00353-201ENST00000435401 PRPSAP1Q14558 356 aa2.34□□□□□ -2.03
LINC00353-201ENST00000435401 SHHQ15465 462 aa2.34□□□□□ -2.03
LINC00353-201ENST00000435401 RGNQ15493 299 aa2.34□□□□□ -2.03
LINC00353-201ENST00000435401 C9orf135Q5VTT2 229 aa2.34□□□□□ -2.03
LINC00353-201ENST00000435401 C22orf42Q6IC83 251 aa2.34□□□□□ -2.03
LINC00353-201ENST00000435401 CEMP1Q6PRD7 247 aaPredicted RBP2.34□□□□□ -2.03
LINC00353-201ENST00000435401 PLET1Q6UQ28 207 aa2.34□□□□□ -2.03
LINC00353-201ENST00000435401 FAM92BQ6ZTR7 304 aa2.34□□□□□ -2.03
LINC00353-201ENST00000435401 ABHD13Q7L211 337 aa2.34□□□□□ -2.03
LINC00353-201ENST00000435401 SLC16A14Q7RTX9 510 aa2.34□□□□□ -2.03
LINC00353-201ENST00000435401 DEFB123Q8N688 67 aa2.34□□□□□ -2.03
LINC00353-201ENST00000435401 C15orf56Q8N910 161 aa2.34□□□□□ -2.03
LINC00353-201ENST00000435401 CCDC148Q8NFR7 591 aa2.34□□□□□ -2.03
LINC00353-201ENST00000435401 OR4A4PQ8NGN8 299 aa2.34□□□□□ -2.03
LINC00353-201ENST00000435401 OR10J6PQ8NGY7 276 aa2.34□□□□□ -2.03
LINC00353-201ENST00000435401 OR4S2Q8NH73 311 aa2.34□□□□□ -2.03
LINC00353-201ENST00000435401 SLC38A4Q969I6 547 aa2.34□□□□□ -2.03
LINC00353-201ENST00000435401 ZNF578Q96N58 590 aaPredicted RBP2.34□□□□□ -2.03
LINC00353-201ENST00000435401 COL21A1Q96P44 957 aa2.34□□□□□ -2.03
LINC00353-201ENST00000435401 C20orf24Q9BUV8 137 aa2.34□□□□□ -2.03
LINC00353-201ENST00000435401 TMEM185BQ9H7F4 350 aa2.34□□□□□ -2.03
LINC00353-201ENST00000435401 ZNF160Q9HCG1 818 aa2.34□□□□□ -2.03
LINC00353-201ENST00000435401 TMEM9BQ9NQ34 198 aa2.34□□□□□ -2.03
LINC00353-201ENST00000435401 LHX9Q9NQ69 397 aa2.34□□□□□ -2.03
LINC00353-201ENST00000435401 SAMSN1Q9NSI8 373 aaKnown RBP2.34□□□□□ -2.03
LINC00353-201ENST00000435401 NLRC5Q86WI3 1866 aa2.34□□□□□ -2.03
LINC00353-201ENST00000435401 ROBO3Q96MS0 1386 aa2.34□□□□□ -2.04
LINC00353-201ENST00000435401 IGHV5-51A0A0C4DH38 117 aa2.33□□□□□ -2.04
LINC00353-201ENST00000435401 A0A1B0GW55 424 aa2.33□□□□□ -2.04
LINC00353-201ENST00000435401 TCP11X1B4DZS4 312 aa2.33□□□□□ -2.04
LINC00353-201ENST00000435401 SGK1O00141 431 aa2.33□□□□□ -2.04
LINC00353-201ENST00000435401 NUPL2O15504 423 aaKnown RBP2.33□□□□□ -2.04
LINC00353-201ENST00000435401 CHST1O43916 411 aa2.33□□□□□ -2.04
LINC00353-201ENST00000435401 SPAG7O75391 227 aa2.33□□□□□ -2.04
LINC00353-201ENST00000435401 H6PDO95479 791 aa2.33□□□□□ -2.04
LINC00353-201ENST00000435401 SNAI1O95863 264 aaPredicted RBP2.33□□□□□ -2.04
LINC00353-201ENST00000435401 DUX4L2P0CJ85 424 aa2.33□□□□□ -2.04
LINC00353-201ENST00000435401 DUX4L3P0CJ86 424 aa2.33□□□□□ -2.04
LINC00353-201ENST00000435401 DUX4L5P0CJ88 424 aa2.33□□□□□ -2.04
LINC00353-201ENST00000435401 DUX4L6P0CJ89 424 aa2.33□□□□□ -2.04
LINC00353-201ENST00000435401 DUX4L7P0CJ90 424 aa2.33□□□□□ -2.04
LINC00353-201ENST00000435401 OR5H8P0DN80 308 aa2.33□□□□□ -2.04
LINC00353-201ENST00000435401 LONP1P36776 959 aaKnown RBP2.33□□□□□ -2.04
LINC00353-201ENST00000435401 MNAT1P51948 309 aa2.33□□□□□ -2.04
LINC00353-201ENST00000435401 PRRX1P54821 245 aa2.33□□□□□ -2.04
LINC00353-201ENST00000435401 CCL23P55773 120 aa2.33□□□□□ -2.04
LINC00353-201ENST00000435401 ADARB1P78563 741 aaKnown RBP2.33□□□□□ -2.04
LINC00353-201ENST00000435401 GBE1Q04446 702 aa2.33□□□□□ -2.04
LINC00353-201ENST00000435401 FAM83EQ2M2I3 478 aa2.33□□□□□ -2.04
LINC00353-201ENST00000435401 TMEM220Q6QAJ8 160 aa2.33□□□□□ -2.04
LINC00353-201ENST00000435401 METAP1DQ6UB28 335 aaPredicted RBP2.33□□□□□ -2.04
LINC00353-201ENST00000435401 PEX26Q7Z412 305 aa2.33□□□□□ -2.04
LINC00353-201ENST00000435401 HDDC2Q7Z4H3 204 aa2.33□□□□□ -2.04
LINC00353-201ENST00000435401 TMCO2Q7Z6W1 182 aaPredicted RBP2.33□□□□□ -2.04
LINC00353-201ENST00000435401 IQCKQ8N0W5 287 aa2.33□□□□□ -2.04
LINC00353-201ENST00000435401 OR10G4Q8NGN3 311 aa2.33□□□□□ -2.04
LINC00353-201ENST00000435401 OR5W2Q8NH69 310 aa2.33□□□□□ -2.04
LINC00353-201ENST00000435401 FAM81AQ8TBF8 368 aa2.33□□□□□ -2.04
LINC00353-201ENST00000435401 CAPSLQ8WWF8 208 aa2.33□□□□□ -2.04
LINC00353-201ENST00000435401 CREB3L1Q96BA8 519 aa2.33□□□□□ -2.04
LINC00353-201ENST00000435401 ECHDC3Q96DC8 303 aa2.33□□□□□ -2.04
LINC00353-201ENST00000435401 TSNARE1Q96NA8 513 aa2.33□□□□□ -2.04
LINC00353-201ENST00000435401 OR2A5Q96R48 311 aa2.33□□□□□ -2.04
LINC00353-201ENST00000435401 PRO3102Q9H379 93 aa2.33□□□□□ -2.04
LINC00353-201ENST00000435401 BEX1Q9HBH7 125 aa2.33□□□□□ -2.04
LINC00353-201ENST00000435401 RETNQ9HD89 108 aa2.33□□□□□ -2.04
LINC00353-201ENST00000435401 HRASLS2Q9NWW9 162 aa2.33□□□□□ -2.04
LINC00353-201ENST00000435401 UXTQ9UBK9 157 aaPredicted RBP2.33□□□□□ -2.04
LINC00353-201ENST00000435401 DUX4Q9UBX2 424 aa2.33□□□□□ -2.04
LINC00353-201ENST00000435401 ZNF222Q9UK12 451 aa2.33□□□□□ -2.04
LINC00353-201ENST00000435401 ASTN1O14525 1302 aa2.33□□□□□ -2.04
LINC00353-201ENST00000435401 CCDC171Q6TFL3 1326 aa2.33□□□□□ -2.04
LINC00353-201ENST00000435401 PLIN4Q96Q06 1357 aa2.33□□□□□ -2.04
LINC00353-201ENST00000435401 BAZ2BQ9UIF8 2168 aaKnown RBP2.33□□□□□ -2.04
LINC00353-201ENST00000435401 CENPFP49454 3210 aa2.32□□□□□ -2.04
LINC00353-201ENST00000435401 MICAL3Q7RTP6 2002 aa2.32□□□□□ -2.04
LINC00353-201ENST00000435401 IGLV1-36A0A0B4J1U3 117 aa2.32□□□□□ -2.04
LINC00353-201ENST00000435401 IGHV3-66A0A0C4DH42 116 aa2.32□□□□□ -2.04
LINC00353-201ENST00000435401 TRBV11-1A0A0K0K1C0 115 aa2.32□□□□□ -2.04
LINC00353-201ENST00000435401 EIF4E2O60573 245 aaKnown RBP2.32□□□□□ -2.04
LINC00353-201ENST00000435401 KLHL41O60662 606 aa2.32□□□□□ -2.04
LINC00353-201ENST00000435401 DNAJB6O75190 326 aa2.32□□□□□ -2.04
LINC00353-201ENST00000435401 CDH16O75309 829 aa2.32□□□□□ -2.04
LINC00353-201ENST00000435401 RAB3DO95716 219 aa2.32□□□□□ -2.04
LINC00353-201ENST00000435401 AGTP01019 485 aa2.32□□□□□ -2.04
LINC00353-201ENST00000435401 ASGR1P07306 291 aa2.32□□□□□ -2.04
LINC00353-201ENST00000435401 RETP07949 1114 aa2.32□□□□□ -2.04
LINC00353-201ENST00000435401 ZNF286BP0CG31 522 aa2.32□□□□□ -2.04
LINC00353-201ENST00000435401 CEACAM3P40198 252 aa2.32□□□□□ -2.04
LINC00353-201ENST00000435401 SYKP43405 635 aa2.32□□□□□ -2.04
LINC00353-201ENST00000435401 CSNK1A1P48729 337 aa2.32□□□□□ -2.04
LINC00353-201ENST00000435401 C21orf59P57076 290 aa2.32□□□□□ -2.04
LINC00353-201ENST00000435401 LINC00315P59091 139 aa2.32□□□□□ -2.04
LINC00353-201ENST00000435401 EIF3EP60228 445 aaKnown RBP2.32□□□□□ -2.04
LINC00353-201ENST00000435401 RPS15P62841 145 aaKnown RBP2.32□□□□□ -2.04
LINC00353-201ENST00000435401 SP4Q02446 784 aa2.32□□□□□ -2.04
LINC00353-201ENST00000435401 LIPEQ05469 1076 aa2.32□□□□□ -2.04
LINC00353-201ENST00000435401 ILKQ13418 452 aa2.32□□□□□ -2.04
LINC00353-201ENST00000435401 GINS1Q14691 196 aa2.32□□□□□ -2.04
LINC00353-201ENST00000435401 ZNF726P1Q15940 193 aa2.32□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms