RNA–Protein interactions for RNA: ENST00000435070.6

CPSF6-202, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPSF6, Length 6,616 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-202ENST00000435070 DNAJB6O75190 326 aa6.7□□□□□ -1.34
CPSF6-202ENST00000435070 SERPINA2P20848 420 aa6.7□□□□□ -1.34
CPSF6-202ENST00000435070 HTR2CP28335 458 aa6.7□□□□□ -1.34
CPSF6-202ENST00000435070 TAGLN2P37802 199 aaKnown RBP6.7□□□□□ -1.34
CPSF6-202ENST00000435070 REEP5Q00765 189 aa6.7□□□□□ -1.34
CPSF6-202ENST00000435070 ERV3-1Q14264 604 aa6.7□□□□□ -1.34
CPSF6-202ENST00000435070 WDR38Q5JTN6 314 aa6.7□□□□□ -1.34
CPSF6-202ENST00000435070 HSD17B11Q8NBQ5 300 aa6.7□□□□□ -1.34
CPSF6-202ENST00000435070 C2orf88Q9BSF0 95 aa6.7□□□□□ -1.34
CPSF6-202ENST00000435070 CNTNAP3Q9BZ76 1288 aa6.7□□□□□ -1.34
CPSF6-202ENST00000435070 FBXL17Q9UF56 701 aa6.7□□□□□ -1.34
CPSF6-202ENST00000435070 MRPS18BQ9Y676 258 aaKnown RBP6.7□□□□□ -1.34
CPSF6-202ENST00000435070 SCAF4O95104 1147 aaKnown RBP6.7□□□□□ -1.34
CPSF6-202ENST00000435070 LYPD3O95274 346 aa6.7□□□□□ -1.34
CPSF6-202ENST00000435070 CPMP14384 443 aa6.7□□□□□ -1.34
CPSF6-202ENST00000435070 KLK2P20151 261 aa6.7□□□□□ -1.34
CPSF6-202ENST00000435070 SULT1A2P50226 295 aa6.7□□□□□ -1.34
CPSF6-202ENST00000435070 AFF3P51826 1226 aaKnown RBP6.7□□□□□ -1.34
CPSF6-202ENST00000435070 ABHD17CQ6PCB6 329 aa6.7□□□□□ -1.34
CPSF6-202ENST00000435070 C17orf78Q8N4C9 275 aa6.7□□□□□ -1.34
CPSF6-202ENST00000435070 LINC01555Q8NAE3 123 aa6.7□□□□□ -1.34
CPSF6-202ENST00000435070 TERB2Q8NHR7 220 aa6.7□□□□□ -1.34
CPSF6-202ENST00000435070 MS4A6EQ96DS6 147 aa6.7□□□□□ -1.34
CPSF6-202ENST00000435070 SNX22Q96L94 193 aa6.7□□□□□ -1.34
CPSF6-202ENST00000435070 PACRGQ96M98 296 aaPredicted RBP6.7□□□□□ -1.34
CPSF6-202ENST00000435070 BCO1Q9HAY6 547 aa6.7□□□□□ -1.34
CPSF6-202ENST00000435070 PRDM7Q9NQW5 492 aa6.7□□□□□ -1.34
CPSF6-202ENST00000435070 IL17BQ9UHF5 180 aa6.7□□□□□ -1.34
CPSF6-202ENST00000435070 DUS4LO95620 317 aaKnown RBP6.7□□□□□ -1.34
CPSF6-202ENST00000435070 CD37P11049 281 aa6.7□□□□□ -1.34
CPSF6-202ENST00000435070 IL2RGP31785 369 aa6.7□□□□□ -1.34
CPSF6-202ENST00000435070 ASCL1P50553 236 aa6.7□□□□□ -1.34
CPSF6-202ENST00000435070 NUTF2P61970 127 aaKnown RBP6.7□□□□□ -1.34
CPSF6-202ENST00000435070 PRAMEF8Q5VWM4 474 aa6.7□□□□□ -1.34
CPSF6-202ENST00000435070 PRAMEF7Q5VXH5 474 aa6.7□□□□□ -1.34
CPSF6-202ENST00000435070 GGNBP1Q5YKI7 109 aa6.7□□□□□ -1.34
CPSF6-202ENST00000435070 UEVLDQ8IX04 471 aa6.7□□□□□ -1.34
CPSF6-202ENST00000435070 GPBAR1Q8TDU6 330 aa6.7□□□□□ -1.34
CPSF6-202ENST00000435070 RARRES2Q99969 163 aa6.7□□□□□ -1.34
CPSF6-202ENST00000435070 PDE7BQ9NP56 450 aa6.7□□□□□ -1.34
CPSF6-202ENST00000435070 LANCL2Q9NS86 450 aa6.7□□□□□ -1.34
CPSF6-202ENST00000435070 A6NCN8 305 aa6.7□□□□□ -1.34
CPSF6-202ENST00000435070 CIDEAO60543 219 aa6.7□□□□□ -1.34
CPSF6-202ENST00000435070 LDB3O75112 727 aa6.7□□□□□ -1.34
CPSF6-202ENST00000435070 KNG1P01042 644 aa6.7□□□□□ -1.34
CPSF6-202ENST00000435070 FCGR2CP31995 323 aa6.7□□□□□ -1.34
CPSF6-202ENST00000435070 METTL27Q8N6F8 245 aaPredicted RBP6.7□□□□□ -1.34
CPSF6-202ENST00000435070 GATSQ8NAP1 163 aa6.7□□□□□ -1.34
CPSF6-202ENST00000435070 DTD1Q8TEA8 209 aa6.7□□□□□ -1.34
CPSF6-202ENST00000435070 HHIPL1Q96JK4 782 aa6.7□□□□□ -1.34
CPSF6-202ENST00000435070 BLKP51451 505 aa6.69□□□□□ -1.34
CPSF6-202ENST00000435070 DUSP8Q13202 625 aa6.69□□□□□ -1.34
CPSF6-202ENST00000435070 DMRTC1Q5HYR2 192 aa6.69□□□□□ -1.34
CPSF6-202ENST00000435070 PRSS54Q6PEW0 395 aa6.69□□□□□ -1.34
CPSF6-202ENST00000435070 AMZ2Q86W34 360 aa6.69□□□□□ -1.34
CPSF6-202ENST00000435070 ZNF619Q8N2I2 560 aa6.69□□□□□ -1.34
CPSF6-202ENST00000435070 ZNF808Q8N4W9 903 aaPredicted RBP6.69□□□□□ -1.34
CPSF6-202ENST00000435070 SHDQ96IW2 340 aa6.69□□□□□ -1.34
CPSF6-202ENST00000435070 FAM83CQ9BQN1 747 aa6.69□□□□□ -1.34
CPSF6-202ENST00000435070 SLC5A7Q9GZV3 580 aa6.69□□□□□ -1.34
CPSF6-202ENST00000435070 TUBA4BQ9H853 241 aa6.69□□□□□ -1.34
CPSF6-202ENST00000435070 ELOVL3Q9HB03 270 aa6.69□□□□□ -1.34
CPSF6-202ENST00000435070 SERINC1Q9NRX5 453 aa6.69□□□□□ -1.34
CPSF6-202ENST00000435070 TMEM150CB9EJG8 249 aa6.69□□□□□ -1.34
CPSF6-202ENST00000435070 GEMIN2O14893 280 aaKnown RBP6.69□□□□□ -1.34
CPSF6-202ENST00000435070 PRKNO60260 465 aaPredicted RBP6.69□□□□□ -1.34
CPSF6-202ENST00000435070 SCGB2A1O75556 95 aa6.69□□□□□ -1.34
CPSF6-202ENST00000435070 SNRNP200O75643 2136 aaKnown RBP6.69□□□□□ -1.34
CPSF6-202ENST00000435070 GLCEO94923 617 aa6.69□□□□□ -1.34
CPSF6-202ENST00000435070 IFNA21P01568 189 aa6.69□□□□□ -1.34
CPSF6-202ENST00000435070 MMP7P09237 267 aaPredicted RBP6.69□□□□□ -1.34
CPSF6-202ENST00000435070 GLI4P10075 376 aa6.69□□□□□ -1.34
CPSF6-202ENST00000435070 CXCR1P25024 350 aa6.69□□□□□ -1.34
CPSF6-202ENST00000435070 EMDP50402 254 aa6.69□□□□□ -1.34
CPSF6-202ENST00000435070 IDH3GP51553 393 aaPredicted RBP6.69□□□□□ -1.34
CPSF6-202ENST00000435070 CYCSP99999 105 aaKnown RBP6.69□□□□□ -1.34
CPSF6-202ENST00000435070 UBE2V2Q15819 145 aa6.69□□□□□ -1.34
CPSF6-202ENST00000435070 ARHGAP11BQ3KRB8 267 aa6.69□□□□□ -1.34
CPSF6-202ENST00000435070 MDGA2Q7Z553 956 aa6.69□□□□□ -1.34
CPSF6-202ENST00000435070 MARCH3Q86UD3 253 aa6.69□□□□□ -1.34
CPSF6-202ENST00000435070 HIST3H2BBQ8N257 126 aa6.69□□□□□ -1.34
CPSF6-202ENST00000435070 PRSS35Q8N3Z0 413 aa6.69□□□□□ -1.34
CPSF6-202ENST00000435070 SUMF2Q8NBJ7 301 aa6.69□□□□□ -1.34
CPSF6-202ENST00000435070 OR2I1PQ8NGU4 316 aa6.69□□□□□ -1.34
CPSF6-202ENST00000435070 Q8WTZ3 238 aa6.69□□□□□ -1.34
CPSF6-202ENST00000435070 SLC25A44Q96H78 314 aaPredicted RBP6.69□□□□□ -1.34
CPSF6-202ENST00000435070 WDR92Q96MX6 357 aa6.69□□□□□ -1.34
CPSF6-202ENST00000435070 HS3ST2Q9Y278 367 aa6.69□□□□□ -1.34
CPSF6-202ENST00000435070 HDGFL3Q9Y3E1 203 aa6.69□□□□□ -1.34
CPSF6-202ENST00000435070 MMACHCQ9Y4U1 282 aa6.69□□□□□ -1.34
CPSF6-202ENST00000435070 IGKV1-8A0A0C4DH67 115 aa6.69□□□□□ -1.34
CPSF6-202ENST00000435070 CLEC3BP05452 202 aa6.69□□□□□ -1.34
CPSF6-202ENST00000435070 C5AR1P21730 350 aa6.69□□□□□ -1.34
CPSF6-202ENST00000435070 TACR3P29371 465 aa6.69□□□□□ -1.34
CPSF6-202ENST00000435070 PPP1CCP36873 323 aaKnown RBP6.69□□□□□ -1.34
CPSF6-202ENST00000435070 CLDN6P56747 220 aa6.69□□□□□ -1.34
CPSF6-202ENST00000435070 SLC26A5P58743 744 aa6.69□□□□□ -1.34
CPSF6-202ENST00000435070 CTXN1P60606 82 aa6.69□□□□□ -1.34
CPSF6-202ENST00000435070 TNFRSF9Q07011 255 aa6.69□□□□□ -1.34
CPSF6-202ENST00000435070 SRSF4Q08170 494 aaKnown RBP6.69□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms