RNA–Protein interactions for RNA: ENST00000433892.6

CD44-209, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 2,292 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-209ENST00000433892 RPS27AP62979 156 aaKnown RBP10.47□□□□□ -0.73
CD44-209ENST00000433892 UBA52P62987 128 aaKnown RBP10.47□□□□□ -0.73
CD44-209ENST00000433892 PLPPR5Q32ZL2 321 aa10.47□□□□□ -0.73
CD44-209ENST00000433892 THEM4Q5T1C6 240 aa10.47□□□□□ -0.73
CD44-209ENST00000433892 PTCRAQ6ISU1 281 aaPredicted RBP10.47□□□□□ -0.73
CD44-209ENST00000433892 LPCAT3Q6P1A2 487 aa10.47□□□□□ -0.73
CD44-209ENST00000433892 KCTD9Q7L273 389 aa10.47□□□□□ -0.73
CD44-209ENST00000433892 HSD17B13Q7Z5P4 300 aaPredicted RBP10.47□□□□□ -0.73
CD44-209ENST00000433892 UEVLDQ8IX04 471 aa10.47□□□□□ -0.73
CD44-209ENST00000433892 KCNRGQ8N5I3 272 aa10.47□□□□□ -0.73
CD44-209ENST00000433892 OR2I1PQ8NGU4 316 aa10.47□□□□□ -0.73
CD44-209ENST00000433892 POC1BQ8TC44 478 aa10.47□□□□□ -0.73
CD44-209ENST00000433892 CYYR1Q96J86 154 aa10.47□□□□□ -0.73
CD44-209ENST00000433892 ZNF75AQ96N20 296 aa10.47□□□□□ -0.73
CD44-209ENST00000433892 WDR77Q9BQA1 342 aaPredicted RBP10.47□□□□□ -0.73
CD44-209ENST00000433892 PHF7Q9BWX1 381 aaPredicted RBP10.47□□□□□ -0.73
CD44-209ENST00000433892 PCED1AQ9H1Q7 454 aa10.47□□□□□ -0.73
CD44-209ENST00000433892 METTL7AQ9H8H3 244 aa10.47□□□□□ -0.73
CD44-209ENST00000433892 KLHL13Q9P2N7 655 aa10.47□□□□□ -0.73
CD44-209ENST00000433892 EXPH5Q8NEV8 1989 aa10.47□□□□□ -0.73
CD44-209ENST00000433892 FREM2Q5SZK8 3169 aa10.47□□□□□ -0.73
CD44-209ENST00000433892 IGLV3-12A0A075B6K2 115 aa10.47□□□□□ -0.73
CD44-209ENST00000433892 A0A1W2PNV4 684 aa10.47□□□□□ -0.73
CD44-209ENST00000433892 ZNF814B7Z6K7 855 aa10.47□□□□□ -0.73
CD44-209ENST00000433892 KCNAB3O43448 404 aa10.47□□□□□ -0.73
CD44-209ENST00000433892 SSX5O60225 188 aa10.47□□□□□ -0.73
CD44-209ENST00000433892 OR2J2O76002 312 aa10.47□□□□□ -0.73
CD44-209ENST00000433892 ZNF20P17024 532 aa10.47□□□□□ -0.73
CD44-209ENST00000433892 SRSF4Q08170 494 aaKnown RBP10.47□□□□□ -0.73
CD44-209ENST00000433892 ABHD12BQ7Z5M8 362 aaPredicted RBP10.47□□□□□ -0.73
CD44-209ENST00000433892 TMEM104Q8NE00 496 aa10.47□□□□□ -0.73
CD44-209ENST00000433892 PXT1Q8NFP0 134 aa10.47□□□□□ -0.73
CD44-209ENST00000433892 OR10K1Q8NGX5 313 aa10.47□□□□□ -0.73
CD44-209ENST00000433892 OR10R2Q8NGX6 335 aa10.47□□□□□ -0.73
CD44-209ENST00000433892 MITD1Q8WV92 249 aa10.47□□□□□ -0.73
CD44-209ENST00000433892 PHB2Q99623 299 aa10.47□□□□□ -0.73
CD44-209ENST00000433892 SLC25A32Q9H2D1 315 aa10.47□□□□□ -0.73
CD44-209ENST00000433892 FN3KRPQ9HA64 309 aa10.47□□□□□ -0.73
CD44-209ENST00000433892 SDHAF3Q9NRP4 125 aa10.47□□□□□ -0.73
CD44-209ENST00000433892 ASH2LQ9UBL3 628 aa10.47□□□□□ -0.73
CD44-209ENST00000433892 RNF222A6NCQ9 220 aa10.46□□□□□ -0.73
CD44-209ENST00000433892 NUPL2O15504 423 aaKnown RBP10.46□□□□□ -0.73
CD44-209ENST00000433892 IFNA6P05013 189 aa10.46□□□□□ -0.73
CD44-209ENST00000433892 PGA4P0DJD7 388 aa10.46□□□□□ -0.73
CD44-209ENST00000433892 PGA3P0DJD8 388 aa10.46□□□□□ -0.73
CD44-209ENST00000433892 DLSTP36957 453 aa10.46□□□□□ -0.73
CD44-209ENST00000433892 CASRP41180 1078 aa10.46□□□□□ -0.73
CD44-209ENST00000433892 EMP2P54851 167 aa10.46□□□□□ -0.73
CD44-209ENST00000433892 GFOD2Q3B7J2 385 aa10.46□□□□□ -0.73
CD44-209ENST00000433892 DMRTC1Q5HYR2 192 aa10.46□□□□□ -0.73
CD44-209ENST00000433892 ZNF529Q6P280 563 aa10.46□□□□□ -0.73
CD44-209ENST00000433892 RABEPKQ7Z6M1 372 aa10.46□□□□□ -0.73
CD44-209ENST00000433892 ZDHHC22Q8N966 263 aa10.46□□□□□ -0.73
CD44-209ENST00000433892 OR2AJ1Q8NGZ0 328 aa10.46□□□□□ -0.73
CD44-209ENST00000433892 MRGPRX4Q96LA9 322 aa10.46□□□□□ -0.73
CD44-209ENST00000433892 OR5B2Q96R09 309 aa10.46□□□□□ -0.73
CD44-209ENST00000433892 ZNF471Q9BX82 626 aaPredicted RBP10.46□□□□□ -0.73
CD44-209ENST00000433892 FANCFQ9NPI8 374 aa10.46□□□□□ -0.73
CD44-209ENST00000433892 RASL12Q9NYN1 266 aa10.46□□□□□ -0.73
CD44-209ENST00000433892 ZNF319Q9P2F9 582 aa10.46□□□□□ -0.73
CD44-209ENST00000433892 CNTRLQ7Z7A1 2325 aa10.46□□□□□ -0.73
CD44-209ENST00000433892 A0A0A6YYD4 124 aa10.46□□□□□ -0.74
CD44-209ENST00000433892 TMEM14DPA8MWL7 114 aa10.46□□□□□ -0.74
CD44-209ENST00000433892 EEF1E1-BLOC1S5C9J1V9 151 aa10.46□□□□□ -0.74
CD44-209ENST00000433892 ZNF878C9JN71 531 aa10.46□□□□□ -0.74
CD44-209ENST00000433892 ETV2O00321 342 aaPredicted RBP10.46□□□□□ -0.74
CD44-209ENST00000433892 RER1O15258 196 aa10.46□□□□□ -0.74
CD44-209ENST00000433892 SIGLEC5O15389 551 aa10.46□□□□□ -0.74
CD44-209ENST00000433892 EFSO43281 561 aa10.46□□□□□ -0.74
CD44-209ENST00000433892 RAMP1O60894 148 aa10.46□□□□□ -0.74
CD44-209ENST00000433892 SCRG1O75711 98 aa10.46□□□□□ -0.74
CD44-209ENST00000433892 OR2F2O95006 317 aa10.46□□□□□ -0.74
CD44-209ENST00000433892 IL2RAP01589 272 aa10.46□□□□□ -0.74
CD44-209ENST00000433892 IGHG1P01857 330 aa10.46□□□□□ -0.74
CD44-209ENST00000433892 SLC25A4P12235 298 aa10.46□□□□□ -0.74
CD44-209ENST00000433892 KLK2P20151 261 aa10.46□□□□□ -0.74
CD44-209ENST00000433892 MPZP25189 248 aa10.46□□□□□ -0.74
CD44-209ENST00000433892 SFTPDP35247 375 aa10.46□□□□□ -0.74
CD44-209ENST00000433892 PTGDSP41222 190 aa10.46□□□□□ -0.74
CD44-209ENST00000433892 STARP49675 285 aa10.46□□□□□ -0.74
CD44-209ENST00000433892 ZNF121P58317 390 aaPredicted RBP10.46□□□□□ -0.74
CD44-209ENST00000433892 SIGLEC14Q08ET2 396 aa10.46□□□□□ -0.74
CD44-209ENST00000433892 OR2F1Q13607 317 aa10.46□□□□□ -0.74
CD44-209ENST00000433892 GLIPR1L1Q6UWM5 242 aa10.46□□□□□ -0.74
CD44-209ENST00000433892 NOXO1Q8NFA2 376 aa10.46□□□□□ -0.74
CD44-209ENST00000433892 OR8B12Q8NGG6 310 aa10.46□□□□□ -0.74
CD44-209ENST00000433892 MARCH1Q8TCQ1 289 aa10.46□□□□□ -0.74
CD44-209ENST00000433892 MRPS24Q96EL2 167 aaKnown RBP10.46□□□□□ -0.74
CD44-209ENST00000433892 FAM71F1Q96KD3 344 aaPredicted RBP10.46□□□□□ -0.74
CD44-209ENST00000433892 BANF2Q9H503 90 aa10.46□□□□□ -0.74
CD44-209ENST00000433892 GPR84Q9NQS5 396 aa10.46□□□□□ -0.74
CD44-209ENST00000433892 MYOTQ9UBF9 498 aa10.46□□□□□ -0.74
CD44-209ENST00000433892 ADAMTS20P59510 1910 aa10.45□□□□□ -0.74
CD44-209ENST00000433892 CEP192Q8TEP8 1941 aa10.45□□□□□ -0.74
CD44-209ENST00000433892 A0A1W2PP11 408 aa10.45□□□□□ -0.74
CD44-209ENST00000433892 CDK2AP1O14519 115 aa10.45□□□□□ -0.74
CD44-209ENST00000433892 BET1O15155 118 aa10.45□□□□□ -0.74
CD44-209ENST00000433892 SOCS1O15524 211 aa10.45□□□□□ -0.74
CD44-209ENST00000433892 BCL2L11O43521 198 aa10.45□□□□□ -0.74
CD44-209ENST00000433892 MPIG6BO95866 241 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms