RNA–Protein interactions for RNA: ENST00000433439.1

CNOT9-205, Transcript of CCR4-NOT transcription complex subunit 9, humanhuman

TSL 4

Gene CNOT9, Length 567 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9-205ENST00000433439 MSMPQ1L6U9 139 aa13.19□□□□□ -0.3
CNOT9-205ENST00000433439 ALKBH6Q3KRA9 238 aa13.19□□□□□ -0.3
CNOT9-205ENST00000433439 COLCA1Q6ZS62 124 aa13.19□□□□□ -0.3
CNOT9-205ENST00000433439 PRSS45Q7RTY3 260 aa13.19□□□□□ -0.3
CNOT9-205ENST00000433439 LRP11Q86VZ4 500 aa13.19□□□□□ -0.3
CNOT9-205ENST00000433439 SYNPRQ8TBG9 265 aa13.19□□□□□ -0.3
CNOT9-205ENST00000433439 KLF14Q8TD94 323 aaPredicted RBP13.19□□□□□ -0.3
CNOT9-205ENST00000433439 CMBLQ96DG6 245 aa13.19□□□□□ -0.3
CNOT9-205ENST00000433439 COG8Q96MW5 612 aa13.19□□□□□ -0.3
CNOT9-205ENST00000433439 ZNF442Q9H7R0 627 aa13.19□□□□□ -0.3
CNOT9-205ENST00000433439 SNX5Q9Y5X3 404 aa13.19□□□□□ -0.3
CNOT9-205ENST00000433439 ABCA4P78363 2273 aa13.19□□□□□ -0.3
CNOT9-205ENST00000433439 A0A1W2PPW3 197 aa13.18□□□□□ -0.3
CNOT9-205ENST00000433439 ICMTO60725 284 aa13.18□□□□□ -0.3
CNOT9-205ENST00000433439 SRSF10O75494 262 aaKnown RBP13.18□□□□□ -0.3
CNOT9-205ENST00000433439 SERPINF1P36955 418 aa13.18□□□□□ -0.3
CNOT9-205ENST00000433439 MMP16P51512 607 aa13.18□□□□□ -0.3
CNOT9-205ENST00000433439 GTF2A1P52655 376 aaPredicted RBP13.18□□□□□ -0.3
CNOT9-205ENST00000433439 SELENOVP59797 346 aa13.18□□□□□ -0.3
CNOT9-205ENST00000433439 KRTAP10-9P60411 292 aa13.18□□□□□ -0.3
CNOT9-205ENST00000433439 ZNF92Q03936 586 aa13.18□□□□□ -0.3
CNOT9-205ENST00000433439 MED22Q15528 200 aa13.18□□□□□ -0.3
CNOT9-205ENST00000433439 WDR38Q5JTN6 314 aa13.18□□□□□ -0.3
CNOT9-205ENST00000433439 ZNF544Q6NX49 715 aa13.18□□□□□ -0.3
CNOT9-205ENST00000433439 PGAP1Q75T13 922 aa13.18□□□□□ -0.3
CNOT9-205ENST00000433439 PRSS48Q7RTY5 328 aa13.18□□□□□ -0.3
CNOT9-205ENST00000433439 CATSPERDQ86XM0 798 aa13.18□□□□□ -0.3
CNOT9-205ENST00000433439 NANOGP1Q8N7R0 232 aa13.18□□□□□ -0.3
CNOT9-205ENST00000433439 ZFP41Q8N8Y5 198 aa13.18□□□□□ -0.3
CNOT9-205ENST00000433439 OR52H1Q8NGJ2 320 aa13.18□□□□□ -0.3
CNOT9-205ENST00000433439 OR52N1Q8NH53 320 aa13.18□□□□□ -0.3
CNOT9-205ENST00000433439 NRGNQ92686 78 aa13.18□□□□□ -0.3
CNOT9-205ENST00000433439 MRPL24Q96A35 216 aaKnown RBP13.18□□□□□ -0.3
CNOT9-205ENST00000433439 SGK3Q96BR1 496 aa13.18□□□□□ -0.3
CNOT9-205ENST00000433439 MARS2Q96GW9 593 aaKnown RBP13.18□□□□□ -0.3
CNOT9-205ENST00000433439 REEP6Q96HR9 211 aa13.18□□□□□ -0.3
CNOT9-205ENST00000433439 MND1Q9BWT6 205 aa13.18□□□□□ -0.3
CNOT9-205ENST00000433439 CDCA4Q9BXL8 241 aa13.18□□□□□ -0.3
CNOT9-205ENST00000433439 MRPL37Q9BZE1 423 aaKnown RBP13.18□□□□□ -0.3
CNOT9-205ENST00000433439 PLK3Q9H4B4 646 aa13.18□□□□□ -0.3
CNOT9-205ENST00000433439 G6PC2Q9NQR9 355 aa13.18□□□□□ -0.3
CNOT9-205ENST00000433439 NBPF19A0A087WUL8 3843 aa13.17□□□□□ -0.3
CNOT9-205ENST00000433439 PNMA8CA0A1B0GUJ8 204 aa13.17□□□□□ -0.3
CNOT9-205ENST00000433439 TMEM129A0AVI4 362 aa13.17□□□□□ -0.3
CNOT9-205ENST00000433439 GGT3PA6NGU5 568 aa13.17□□□□□ -0.3
CNOT9-205ENST00000433439 J3QW42 95 aa13.17□□□□□ -0.3
CNOT9-205ENST00000433439 P2RY10O00398 339 aa13.17□□□□□ -0.3
CNOT9-205ENST00000433439 XRCC2O43543 280 aa13.17□□□□□ -0.3
CNOT9-205ENST00000433439 TIMM8AO60220 97 aaPredicted RBP13.17□□□□□ -0.3
CNOT9-205ENST00000433439 TTRP02766 147 aa13.17□□□□□ -0.3
CNOT9-205ENST00000433439 TTKP33981 857 aa13.17□□□□□ -0.3
CNOT9-205ENST00000433439 WNT4P56705 351 aa13.17□□□□□ -0.3
CNOT9-205ENST00000433439 KLF3P57682 345 aaPredicted RBP13.17□□□□□ -0.3
CNOT9-205ENST00000433439 ALKBH1Q13686 389 aaKnown RBP13.17□□□□□ -0.3
CNOT9-205ENST00000433439 GK2Q14410 553 aaPredicted RBP13.17□□□□□ -0.3
CNOT9-205ENST00000433439 XAF1Q6GPH4 301 aa13.17□□□□□ -0.3
CNOT9-205ENST00000433439 OR2T2Q6IF00 324 aa13.17□□□□□ -0.3
CNOT9-205ENST00000433439 C1orf174Q8IYL3 243 aa13.17□□□□□ -0.3
CNOT9-205ENST00000433439 OR5AS1Q8N127 324 aa13.17□□□□□ -0.3
CNOT9-205ENST00000433439 MUC15Q8N387 334 aa13.17□□□□□ -0.3
CNOT9-205ENST00000433439 PRSS35Q8N3Z0 413 aa13.17□□□□□ -0.3
CNOT9-205ENST00000433439 OR2G2Q8NGZ5 317 aa13.17□□□□□ -0.3
CNOT9-205ENST00000433439 OR51E1Q8TCB6 317 aa13.17□□□□□ -0.3
CNOT9-205ENST00000433439 FAM71F1Q96KD3 344 aaPredicted RBP13.17□□□□□ -0.3
CNOT9-205ENST00000433439 OR5M11Q96RB7 305 aa13.17□□□□□ -0.3
CNOT9-205ENST00000433439 LIME1Q9H400 295 aa13.17□□□□□ -0.3
CNOT9-205ENST00000433439 MOB1AQ9H8S9 216 aa13.17□□□□□ -0.3
CNOT9-205ENST00000433439 PLEKHF2Q9H8W4 249 aa13.17□□□□□ -0.3
CNOT9-205ENST00000433439 FAIMQ9NVQ4 179 aa13.17□□□□□ -0.3
CNOT9-205ENST00000433439 BABAM2Q9NXR7 383 aa13.17□□□□□ -0.3
CNOT9-205ENST00000433439 MYEF2Q9P2K5 600 aaKnown RBP13.17□□□□□ -0.3
CNOT9-205ENST00000433439 NUFIP1Q9UHK0 495 aaKnown RBP13.17□□□□□ -0.3
CNOT9-205ENST00000433439 LAMP3Q9UQV4 416 aa13.17□□□□□ -0.3
CNOT9-205ENST00000433439 UTP20O75691 2785 aaKnown RBP13.16□□□□□ -0.3
CNOT9-205ENST00000433439 ROS1P08922 2347 aa13.16□□□□□ -0.3
CNOT9-205ENST00000433439 ACOD1A6NK06 481 aa13.16□□□□□ -0.3
CNOT9-205ENST00000433439 TNFAIP8O95379 198 aa13.16□□□□□ -0.3
CNOT9-205ENST00000433439 LALBAP00709 142 aa13.16□□□□□ -0.3
CNOT9-205ENST00000433439 HSMCR30P0CW71 290 aa13.16□□□□□ -0.3
CNOT9-205ENST00000433439 KIR3DL2P43630 455 aa13.16□□□□□ -0.3
CNOT9-205ENST00000433439 NANOS3P60323 173 aaKnown RBP13.16□□□□□ -0.3
CNOT9-205ENST00000433439 PSG7Q13046 419 aa13.16□□□□□ -0.3
CNOT9-205ENST00000433439 IRF3Q14653 427 aa13.16□□□□□ -0.3
CNOT9-205ENST00000433439 NKPD1Q17RQ9 610 aa13.16□□□□□ -0.3
CNOT9-205ENST00000433439 KCTD21Q4G0X4 260 aa13.16□□□□□ -0.3
CNOT9-205ENST00000433439 AGAP6Q5VW22 663 aa13.16□□□□□ -0.3
CNOT9-205ENST00000433439 ELMOD2Q8IZ81 293 aa13.16□□□□□ -0.3
CNOT9-205ENST00000433439 ZNF611Q8N823 705 aa13.16□□□□□ -0.3
CNOT9-205ENST00000433439 BHLHE23Q8NDY6 225 aa13.16□□□□□ -0.3
CNOT9-205ENST00000433439 RNF166Q96A37 237 aaPredicted RBP13.16□□□□□ -0.3
CNOT9-205ENST00000433439 SOX7Q9BT81 388 aa13.16□□□□□ -0.3
CNOT9-205ENST00000433439 TRIM36Q9NQ86 728 aa13.16□□□□□ -0.3
CNOT9-205ENST00000433439 GPR84Q9NQS5 396 aa13.16□□□□□ -0.3
CNOT9-205ENST00000433439 FRRS1LQ9P0K9 344 aa13.16□□□□□ -0.3
CNOT9-205ENST00000433439 TAAR3PQ9P1P4 343 aa13.16□□□□□ -0.3
CNOT9-205ENST00000433439 PURGQ9UJV8 347 aaKnown RBP13.16□□□□□ -0.3
CNOT9-205ENST00000433439 TRBV2A0A0J9YWF9 115 aa13.15□□□□□ -0.3
CNOT9-205ENST00000433439 SOD3P08294 240 aa13.15□□□□□ -0.3
CNOT9-205ENST00000433439 RAC2P15153 192 aa13.15□□□□□ -0.3
CNOT9-205ENST00000433439 ZNF250P15622 560 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms