RNA–Protein interactions for RNA: ENST00000430771.2

CHD4-202, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 4

Gene CHD4, Length 527 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-202ENST00000430771 TRIM64A6NGJ6 449 aa9.47□□□□□ -0.89
CHD4-202ENST00000430771 TMEM212A6NML5 194 aa9.47□□□□□ -0.89
CHD4-202ENST00000430771 PLAUP00749 431 aa9.47□□□□□ -0.89
CHD4-202ENST00000430771 NGFP01138 241 aa9.47□□□□□ -0.89
CHD4-202ENST00000430771 SELEP16581 610 aa9.47□□□□□ -0.89
CHD4-202ENST00000430771 APOBEC3AP31941 199 aaPredicted RBP9.47□□□□□ -0.89
CHD4-202ENST00000430771 THBS4P35443 961 aa9.47□□□□□ -0.89
CHD4-202ENST00000430771 CCR9P51686 369 aa9.47□□□□□ -0.89
CHD4-202ENST00000430771 KLF3P57682 345 aaPredicted RBP9.47□□□□□ -0.89
CHD4-202ENST00000430771 ERVS71-1P61550 626 aa9.47□□□□□ -0.89
CHD4-202ENST00000430771 ALKBH1Q13686 389 aaKnown RBP9.47□□□□□ -0.89
CHD4-202ENST00000430771 CDK5R1Q15078 307 aa9.47□□□□□ -0.89
CHD4-202ENST00000430771 WDR38Q5JTN6 314 aa9.47□□□□□ -0.89
CHD4-202ENST00000430771 GLYATL3Q5SZD4 288 aa9.47□□□□□ -0.89
CHD4-202ENST00000430771 SPATA46Q5T0L3 261 aa9.47□□□□□ -0.89
CHD4-202ENST00000430771 MBNL2Q5VZF2 373 aaKnown RBP9.47□□□□□ -0.89
CHD4-202ENST00000430771 RPL22L1Q6P5R6 122 aaKnown RBP9.47□□□□□ -0.89
CHD4-202ENST00000430771 FBXW12Q6X9E4 464 aa9.47□□□□□ -0.89
CHD4-202ENST00000430771 C20orf204Q6ZNR8 217 aa9.47□□□□□ -0.89
CHD4-202ENST00000430771 PGAP1Q75T13 922 aa9.47□□□□□ -0.89
CHD4-202ENST00000430771 PRSS45Q7RTY3 260 aa9.47□□□□□ -0.89
CHD4-202ENST00000430771 ELMOD2Q8IZ81 293 aa9.47□□□□□ -0.89
CHD4-202ENST00000430771 FBXL14Q8N1E6 418 aa9.47□□□□□ -0.89
CHD4-202ENST00000430771 CCDC54Q8NEL0 328 aa9.47□□□□□ -0.89
CHD4-202ENST00000430771 OR2G2Q8NGZ5 317 aa9.47□□□□□ -0.89
CHD4-202ENST00000430771 SYNPRQ8TBG9 265 aa9.47□□□□□ -0.89
CHD4-202ENST00000430771 TMEM171Q8WVE6 324 aa9.47□□□□□ -0.89
CHD4-202ENST00000430771 GATAD2BQ8WXI9 593 aa9.47□□□□□ -0.89
CHD4-202ENST00000430771 ITFG2Q969R8 447 aa9.47□□□□□ -0.89
CHD4-202ENST00000430771 MRPL24Q96A35 216 aaKnown RBP9.47□□□□□ -0.89
CHD4-202ENST00000430771 SMIM19Q96E16 107 aa9.47□□□□□ -0.89
CHD4-202ENST00000430771 REEP6Q96HR9 211 aa9.47□□□□□ -0.89
CHD4-202ENST00000430771 OR2J1Q9GZK6 312 aa9.47□□□□□ -0.89
CHD4-202ENST00000430771 PLK3Q9H4B4 646 aa9.47□□□□□ -0.89
CHD4-202ENST00000430771 UBTD1Q9HAC8 227 aa9.47□□□□□ -0.89
CHD4-202ENST00000430771 G6PC2Q9NQR9 355 aa9.47□□□□□ -0.89
CHD4-202ENST00000430771 BABAM2Q9NXR7 383 aa9.47□□□□□ -0.89
CHD4-202ENST00000430771 CGGBP1Q9UFW8 167 aaPredicted RBP9.47□□□□□ -0.89
CHD4-202ENST00000430771 FBXO9Q9UK97 447 aaPredicted RBP9.47□□□□□ -0.89
CHD4-202ENST00000430771 UTP20O75691 2785 aaKnown RBP9.47□□□□□ -0.89
CHD4-202ENST00000430771 CADP27708 2225 aa9.47□□□□□ -0.89
CHD4-202ENST00000430771 ADGRG4Q8IZF6 3080 aa9.46□□□□□ -0.89
CHD4-202ENST00000430771 A0A1B0GVI7 797 aa9.46□□□□□ -0.9
CHD4-202ENST00000430771 A0A1W2PPW3 197 aa9.46□□□□□ -0.9
CHD4-202ENST00000430771 E7EQL1 145 aa9.46□□□□□ -0.9
CHD4-202ENST00000430771 MTRF1O75570 445 aaKnown RBP9.46□□□□□ -0.9
CHD4-202ENST00000430771 PNPP00491 289 aa9.46□□□□□ -0.9
CHD4-202ENST00000430771 TTRP02766 147 aa9.46□□□□□ -0.9
CHD4-202ENST00000430771 RAC2P15153 192 aa9.46□□□□□ -0.9
CHD4-202ENST00000430771 ZNF12P17014 697 aa9.46□□□□□ -0.9
CHD4-202ENST00000430771 FABP6P51161 128 aa9.46□□□□□ -0.9
CHD4-202ENST00000430771 SNRPD2P62316 118 aaKnown RBP9.46□□□□□ -0.9
CHD4-202ENST00000430771 ACSM1Q08AH1 577 aa9.46□□□□□ -0.9
CHD4-202ENST00000430771 MLLT11Q13015 90 aaPredicted RBP9.46□□□□□ -0.9
CHD4-202ENST00000430771 GK2Q14410 553 aaPredicted RBP9.46□□□□□ -0.9
CHD4-202ENST00000430771 SPHARQ15513 63 aa9.46□□□□□ -0.9
CHD4-202ENST00000430771 MOGQ16653 247 aa9.46□□□□□ -0.9
CHD4-202ENST00000430771 ZMAT1Q5H9K5 638 aa9.46□□□□□ -0.9
CHD4-202ENST00000430771 TMEM244Q5VVB8 128 aa9.46□□□□□ -0.9
CHD4-202ENST00000430771 NAA40Q86UY6 237 aa9.46□□□□□ -0.9
CHD4-202ENST00000430771 SPARTQ8N0X7 666 aa9.46□□□□□ -0.9
CHD4-202ENST00000430771 FTMTQ8N4E7 242 aa9.46□□□□□ -0.9
CHD4-202ENST00000430771 ZNF676Q8N7Q3 588 aa9.46□□□□□ -0.9
CHD4-202ENST00000430771 ZNF485Q8NCK3 441 aa9.46□□□□□ -0.9
CHD4-202ENST00000430771 TSPAN14Q8NG11 270 aa9.46□□□□□ -0.9
CHD4-202ENST00000430771 OR2AE1Q8NHA4 323 aa9.46□□□□□ -0.9
CHD4-202ENST00000430771 KLF14Q8TD94 323 aaPredicted RBP9.46□□□□□ -0.9
CHD4-202ENST00000430771 NEUROG1Q92886 237 aa9.46□□□□□ -0.9
CHD4-202ENST00000430771 UFD1Q92890 307 aa9.46□□□□□ -0.9
CHD4-202ENST00000430771 SPSB4Q96A44 273 aa9.46□□□□□ -0.9
CHD4-202ENST00000430771 MARS2Q96GW9 593 aaKnown RBP9.46□□□□□ -0.9
CHD4-202ENST00000430771 ACOT13Q9NPJ3 140 aa9.46□□□□□ -0.9
CHD4-202ENST00000430771 GPR160Q9UJ42 338 aa9.46□□□□□ -0.9
CHD4-202ENST00000430771 LSM2Q9Y333 95 aaKnown RBP9.46□□□□□ -0.9
CHD4-202ENST00000430771 STARD10Q9Y365 291 aa9.46□□□□□ -0.9
CHD4-202ENST00000430771 IGLV3-9A0A075B6K5 115 aa9.45□□□□□ -0.9
CHD4-202ENST00000430771 TRBV2A0A0J9YWF9 115 aa9.45□□□□□ -0.9
CHD4-202ENST00000430771 hCG_38984A0A1B0GV85 526 aa9.45□□□□□ -0.9
CHD4-202ENST00000430771 LOC107986453A0A1B0GWG9 222 aa9.45□□□□□ -0.9
CHD4-202ENST00000430771 MAGEA13PA6NCF6 341 aa9.45□□□□□ -0.9
CHD4-202ENST00000430771 GGT3PA6NGU5 568 aa9.45□□□□□ -0.9
CHD4-202ENST00000430771 B9A039 149 aa9.45□□□□□ -0.9
CHD4-202ENST00000430771 SYT7O43581 403 aa9.45□□□□□ -0.9
CHD4-202ENST00000430771 TIMM8AO60220 97 aaPredicted RBP9.45□□□□□ -0.9
CHD4-202ENST00000430771 DHRS3O75911 302 aa9.45□□□□□ -0.9
CHD4-202ENST00000430771 OR4A8P0C604 315 aa9.45□□□□□ -0.9
CHD4-202ENST00000430771 ATP6V1B1P15313 513 aa9.45□□□□□ -0.9
CHD4-202ENST00000430771 ZNF250P15622 560 aa9.45□□□□□ -0.9
CHD4-202ENST00000430771 KITLGP21583 273 aa9.45□□□□□ -0.9
CHD4-202ENST00000430771 ACHEP22303 614 aa9.45□□□□□ -0.9
CHD4-202ENST00000430771 TTKP33981 857 aa9.45□□□□□ -0.9
CHD4-202ENST00000430771 SERPINF1P36955 418 aa9.45□□□□□ -0.9
CHD4-202ENST00000430771 KIR3DL2P43630 455 aa9.45□□□□□ -0.9
CHD4-202ENST00000430771 MAP2K4P45985 399 aa9.45□□□□□ -0.9
CHD4-202ENST00000430771 EVX1P49640 407 aa9.45□□□□□ -0.9
CHD4-202ENST00000430771 CDH15P55291 814 aa9.45□□□□□ -0.9
CHD4-202ENST00000430771 NANOS3P60323 173 aaKnown RBP9.45□□□□□ -0.9
CHD4-202ENST00000430771 ZNF92Q03936 586 aa9.45□□□□□ -0.9
CHD4-202ENST00000430771 EFNB3Q15768 340 aa9.45□□□□□ -0.9
CHD4-202ENST00000430771 ADIPOQQ15848 244 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms