RNA–Protein interactions for RNA: ENST00000430328.6

RIF1-204, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RIF1, Length 7,992 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-204ENST00000430328 P2RY2P41231 377 aa15.03■□□□□ -0
RIF1-204ENST00000430328 SNRPNP63162 240 aaKnown RBP15.03■□□□□ -0
RIF1-204ENST00000430328 BATF2Q8N1L9 274 aa15.03■□□□□ -0
RIF1-204ENST00000430328 C5orf17Q8NAS9 161 aa15.03■□□□□ -0
RIF1-204ENST00000430328 APOOQ9BUR5 198 aa15.03■□□□□ -0
RIF1-204ENST00000430328 NDRG4Q9ULP0 352 aaKnown RBP15.03■□□□□ -0
RIF1-204ENST00000430328 TMED7-TICAM2A0A0A6YYA0 188 aa15.03■□□□□ -0
RIF1-204ENST00000430328 FABP2P12104 132 aa15.03■□□□□ -0
RIF1-204ENST00000430328 OTUD1Q5VV17 481 aaPredicted RBP15.03■□□□□ -0
RIF1-204ENST00000430328 ZNF738Q8NE65 137 aa15.03■□□□□ -0
RIF1-204ENST00000430328 CLEC4DQ8WXI8 215 aa15.03■□□□□ -0
RIF1-204ENST00000430328 SGK494Q96LW2 274 aa15.03■□□□□ -0
RIF1-204ENST00000430328 HDAC8Q9BY41 377 aa15.03■□□□□ -0
RIF1-204ENST00000430328 MAGT1Q9H0U3 335 aa15.03■□□□□ -0
RIF1-204ENST00000430328 P2RY12Q9H244 342 aa15.03■□□□□ -0
RIF1-204ENST00000430328 TMED7Q9Y3B3 224 aa15.03■□□□□ -0
RIF1-204ENST00000430328 ARHGAP23Q9P227 1491 aa15.03■□□□□ -0
RIF1-204ENST00000430328 LOC107984156A0A0G2JMH3 177 aa15.03■□□□□ -0
RIF1-204ENST00000430328 C11orf97A0A1B0GVM6 126 aaPredicted RBP15.03■□□□□ -0
RIF1-204ENST00000430328 ANKRD61A6NGH8 418 aa15.03■□□□□ -0
RIF1-204ENST00000430328 ARL17AQ8IVW1 177 aa15.03■□□□□ -0
RIF1-204ENST00000430328 APCDD1Q8J025 514 aa15.03■□□□□ -0
RIF1-204ENST00000430328 SLCO4A1Q96BD0 722 aa15.03■□□□□ -0
RIF1-204ENST00000430328 GPR87Q9BY21 358 aa15.03■□□□□ -0
RIF1-204ENST00000430328 EDN1P05305 212 aa15.02■□□□□ -0
RIF1-204ENST00000430328 CRYBA1P05813 215 aa15.02■□□□□ -0
RIF1-204ENST00000430328 OR5M11Q96RB7 305 aa15.02■□□□□ -0
RIF1-204ENST00000430328 SRD5A3Q9H8P0 318 aa15.02■□□□□ -0
RIF1-204ENST00000430328 DIP2AQ14689 1571 aa15.02■□□□□ -0
RIF1-204ENST00000430328 HNRNPA1P09651 372 aaKnown RBP eCLIP15.02■□□□□ -0
RIF1-204ENST00000430328 MRAP2Q96G30 205 aa15.02■□□□□ -0
RIF1-204ENST00000430328 TNFRSF10CO14798 259 aa15.02■□□□□ -0
RIF1-204ENST00000430328 MT-ATP6P00846 226 aa15.02■□□□□ -0
RIF1-204ENST00000430328 EID2BQ96D98 161 aa15.02■□□□□ -0
RIF1-204ENST00000430328 DCBLD2Q96PD2 775 aa15.02■□□□□ -0
RIF1-204ENST00000430328 Q56UQ5 140 aa15.02□□□□□ -0.01
RIF1-204ENST00000430328 NAT6Q93015 286 aa15.02□□□□□ -0.01
RIF1-204ENST00000430328 MCHR2Q969V1 340 aa15.02□□□□□ -0.01
RIF1-204ENST00000430328 OR51B4Q9Y5P0 310 aa15.02□□□□□ -0.01
RIF1-204ENST00000430328 DUXBA0A1W2PPF3 345 aa15.02□□□□□ -0.01
RIF1-204ENST00000430328 FUCA1P04066 466 aa15.02□□□□□ -0.01
RIF1-204ENST00000430328 OR10J1P30954 320 aa15.02□□□□□ -0.01
RIF1-204ENST00000430328 OR1D5P58170 312 aa15.02□□□□□ -0.01
RIF1-204ENST00000430328 SMAGPQ0VAQ4 97 aa15.02□□□□□ -0.01
RIF1-204ENST00000430328 FAM26EQ8N5C1 309 aa15.02□□□□□ -0.01
RIF1-204ENST00000430328 NUDT10Q8NFP7 164 aa15.02□□□□□ -0.01
RIF1-204ENST00000430328 NUDT11Q96G61 164 aa15.02□□□□□ -0.01
RIF1-204ENST00000430328 OPALINQ96PE5 141 aa15.02□□□□□ -0.01
RIF1-204ENST00000430328 ZCCHC11Q5TAX3 1644 aaKnown RBP15.02□□□□□ -0.01
RIF1-204ENST00000430328 GAGE10A6NGK3 116 aa15.02□□□□□ -0.01
RIF1-204ENST00000430328 SDCBPO00560 298 aaPredicted RBP15.02□□□□□ -0.01
RIF1-204ENST00000430328 NRASP01111 189 aa15.02□□□□□ -0.01
RIF1-204ENST00000430328 HRASP01112 189 aa15.02□□□□□ -0.01
RIF1-204ENST00000430328 KRASP01116 189 aa15.02□□□□□ -0.01
RIF1-204ENST00000430328 GUSBP08236 651 aa15.02□□□□□ -0.01
RIF1-204ENST00000430328 FKBP2P26885 142 aaKnown RBP15.02□□□□□ -0.01
RIF1-204ENST00000430328 HOXA4Q00056 320 aaPredicted RBP15.02□□□□□ -0.01
RIF1-204ENST00000430328 ZBTB37Q5TC79 503 aa15.02□□□□□ -0.01
RIF1-204ENST00000430328 FAM24BQ8N5W8 94 aa15.02□□□□□ -0.01
RIF1-204ENST00000430328 TMEM178AQ8NBL3 297 aa15.02□□□□□ -0.01
RIF1-204ENST00000430328 LKAAEAR1Q8TD35 194 aa15.02□□□□□ -0.01
RIF1-204ENST00000430328 CHST8Q9H2A9 424 aa15.02□□□□□ -0.01
RIF1-204ENST00000430328 C11orf68Q9H3H3 251 aaKnown RBP15.02□□□□□ -0.01
RIF1-204ENST00000430328 ONECUT2O95948 504 aa15.01□□□□□ -0.01
RIF1-204ENST00000430328 SDHBP21912 280 aa15.01□□□□□ -0.01
RIF1-204ENST00000430328 C11orf91Q3C1V1 193 aa15.01□□□□□ -0.01
RIF1-204ENST00000430328 ZNF260Q3ZCT1 412 aa15.01□□□□□ -0.01
RIF1-204ENST00000430328 Q6ZPB1 254 aaPredicted RBP15.01□□□□□ -0.01
RIF1-204ENST00000430328 DEFB132Q7Z7B7 95 aa15.01□□□□□ -0.01
RIF1-204ENST00000430328 THOC3Q96J01 351 aaKnown RBP15.01□□□□□ -0.01
RIF1-204ENST00000430328 ABCA1O95477 2261 aa15.01□□□□□ -0.01
RIF1-204ENST00000430328 ADGRB1O14514 1584 aa15.01□□□□□ -0.01
RIF1-204ENST00000430328 LY86O95711 162 aa15.01□□□□□ -0.01
RIF1-204ENST00000430328 RNF224P0DH78 156 aa15.01□□□□□ -0.01
RIF1-204ENST00000430328 CYBAP13498 195 aa15.01□□□□□ -0.01
RIF1-204ENST00000430328 DEFB133Q30KQ1 61 aa15.01□□□□□ -0.01
RIF1-204ENST00000430328 ADAT3Q96EY9 351 aaPredicted RBP15.01□□□□□ -0.01
RIF1-204ENST00000430328 DUS3LQ96G46 650 aaKnown RBP15.01□□□□□ -0.01
RIF1-204ENST00000430328 FER1L6-AS2Q96M78 137 aa15.01□□□□□ -0.01
RIF1-204ENST00000430328 WSB1Q9Y6I7 421 aa15.01□□□□□ -0.01
RIF1-204ENST00000430328 CEP170BQ9Y4F5 1589 aaPredicted RBP15.01□□□□□ -0.01
RIF1-204ENST00000430328 OPN1MWP04001 364 aa15.01□□□□□ -0.01
RIF1-204ENST00000430328 OPN1MW2P0DN77 364 aa15.01□□□□□ -0.01
RIF1-204ENST00000430328 OPN1MW3P0DN78 364 aa15.01□□□□□ -0.01
RIF1-204ENST00000430328 ARRB2P32121 409 aa15.01□□□□□ -0.01
RIF1-204ENST00000430328 ZNF789Q5FWF6 425 aa15.01□□□□□ -0.01
RIF1-204ENST00000430328 OR5AU1Q8NGC0 362 aa15.01□□□□□ -0.01
RIF1-204ENST00000430328 PAM16Q9Y3D7 125 aa15.01□□□□□ -0.01
RIF1-204ENST00000430328 MMP24Q9Y5R2 645 aa15.01□□□□□ -0.01
RIF1-204ENST00000430328 RUNX3Q13761 415 aa15.01□□□□□ -0.01
RIF1-204ENST00000430328 DND1Q8IYX4 353 aaKnown RBP15.01□□□□□ -0.01
RIF1-204ENST00000430328 ZDHHC16Q969W1 377 aa15.01□□□□□ -0.01
RIF1-204ENST00000430328 HHIPQ96QV1 700 aa15.01□□□□□ -0.01
RIF1-204ENST00000430328 MMACHCQ9Y4U1 282 aa15.01□□□□□ -0.01
RIF1-204ENST00000430328 PIPP12273 146 aaPredicted RBP15.01□□□□□ -0.01
RIF1-204ENST00000430328 OPRK1P41145 380 aa15.01□□□□□ -0.01
RIF1-204ENST00000430328 TCEAL1Q15170 157 aa15.01□□□□□ -0.01
RIF1-204ENST00000430328 OPRM1P35372 400 aa15.01□□□□□ -0.01
RIF1-204ENST00000430328 ZNF816Q0VGE8 651 aaPredicted RBP15.01□□□□□ -0.01
RIF1-204ENST00000430328 SPNS3Q6ZMD2 512 aa15.01□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms