RNA–Protein interactions for RNA: ENST00000429846.1

MSH5-208, Transcript of mutS homolog 5, humanhuman

TSL 3

Gene MSH5, Length 616 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-208ENST00000429846 TMIGD2Q96BF3 282 aa12.4□□□□□ -0.42
MSH5-208ENST00000429846 OPA3Q9H6K4 179 aa12.4□□□□□ -0.42
MSH5-208ENST00000429846 MED4Q9NPJ6 270 aa12.4□□□□□ -0.42
MSH5-208ENST00000429846 ERVK-18Q9QC07 812 aa12.4□□□□□ -0.42
MSH5-208ENST00000429846 RNF7Q9UBF6 113 aa12.4□□□□□ -0.42
MSH5-208ENST00000429846 TMCC3Q9ULS5 477 aa12.4□□□□□ -0.42
MSH5-208ENST00000429846 V9GYQ6 96 aa12.4□□□□□ -0.42
MSH5-208ENST00000429846 CD300LBA8K4G0 201 aa12.39□□□□□ -0.43
MSH5-208ENST00000429846 C22orf46C9J442 243 aa12.39□□□□□ -0.43
MSH5-208ENST00000429846 HOXA3O43365 443 aaPredicted RBP12.39□□□□□ -0.43
MSH5-208ENST00000429846 NDUFA2O43678 99 aa12.39□□□□□ -0.43
MSH5-208ENST00000429846 HSD17B1P14061 328 aa12.39□□□□□ -0.43
MSH5-208ENST00000429846 ZNF823P16415 610 aa12.39□□□□□ -0.43
MSH5-208ENST00000429846 OTX1P32242 354 aaPredicted RBP12.39□□□□□ -0.43
MSH5-208ENST00000429846 PRSS12P56730 875 aa12.39□□□□□ -0.43
MSH5-208ENST00000429846 KHDRBS1Q07666 443 aaKnown RBP eCLIP12.39□□□□□ -0.43
MSH5-208ENST00000429846 MZT1Q08AG7 82 aa12.39□□□□□ -0.43
MSH5-208ENST00000429846 TSPAN31Q12999 210 aa12.39□□□□□ -0.43
MSH5-208ENST00000429846 DEFB112Q30KQ8 113 aa12.39□□□□□ -0.43
MSH5-208ENST00000429846 C11orf91Q3C1V1 193 aa12.39□□□□□ -0.43
MSH5-208ENST00000429846 PRAMEF6Q5VXH4 476 aa12.39□□□□□ -0.43
MSH5-208ENST00000429846 DRAM2Q6UX65 266 aa12.39□□□□□ -0.43
MSH5-208ENST00000429846 LYPD2Q6UXB3 125 aa12.39□□□□□ -0.43
MSH5-208ENST00000429846 BRD3OSQ6XYD6 125 aa12.39□□□□□ -0.43
MSH5-208ENST00000429846 TMEM86BQ8N661 226 aa12.39□□□□□ -0.43
MSH5-208ENST00000429846 SPERTQ8NA61 448 aa12.39□□□□□ -0.43
MSH5-208ENST00000429846 MAP6Q96JE9 813 aa12.39□□□□□ -0.43
MSH5-208ENST00000429846 TECTBQ96PL2 329 aa12.39□□□□□ -0.43
MSH5-208ENST00000429846 ADAT1Q9BUB4 502 aaKnown RBP12.39□□□□□ -0.43
MSH5-208ENST00000429846 MMADHCQ9H3L0 296 aaPredicted RBP12.39□□□□□ -0.43
MSH5-208ENST00000429846 FN3KQ9H479 309 aa12.39□□□□□ -0.43
MSH5-208ENST00000429846 UFSP2Q9NUQ7 469 aa12.39□□□□□ -0.43
MSH5-208ENST00000429846 ZNF446Q9NWS9 450 aa12.39□□□□□ -0.43
MSH5-208ENST00000429846 MRPL22Q9NWU5 206 aaKnown RBP12.39□□□□□ -0.43
MSH5-208ENST00000429846 MRPL15Q9P015 296 aaKnown RBP12.39□□□□□ -0.43
MSH5-208ENST00000429846 TRAV38-1A0A0B4J264 116 aa12.38□□□□□ -0.43
MSH5-208ENST00000429846 MDFIC2A0A1B0GVS7 189 aa12.38□□□□□ -0.43
MSH5-208ENST00000429846 ZNF879B4DU55 563 aa12.38□□□□□ -0.43
MSH5-208ENST00000429846 LGALS8O00214 317 aa12.38□□□□□ -0.43
MSH5-208ENST00000429846 P2RY10O00398 339 aa12.38□□□□□ -0.43
MSH5-208ENST00000429846 KCNAB3O43448 404 aa12.38□□□□□ -0.43
MSH5-208ENST00000429846 MDKP21741 143 aaPredicted RBP12.38□□□□□ -0.43
MSH5-208ENST00000429846 CA6P23280 308 aa12.38□□□□□ -0.43
MSH5-208ENST00000429846 RRM2P31350 389 aa12.38□□□□□ -0.43
MSH5-208ENST00000429846 CFHR2P36980 270 aa12.38□□□□□ -0.43
MSH5-208ENST00000429846 RPL15P61313 204 aaKnown RBP12.38□□□□□ -0.43
MSH5-208ENST00000429846 MPPED2Q15777 294 aa12.38□□□□□ -0.43
MSH5-208ENST00000429846 SAMD4BQ5PRF9 694 aaKnown RBP12.38□□□□□ -0.43
MSH5-208ENST00000429846 Q6YL49 198 aa12.38□□□□□ -0.43
MSH5-208ENST00000429846 NAA40Q86UY6 237 aa12.38□□□□□ -0.43
MSH5-208ENST00000429846 RNF148Q8N7C7 305 aa12.38□□□□□ -0.43
MSH5-208ENST00000429846 PROKR2Q8NFJ6 384 aa12.38□□□□□ -0.43
MSH5-208ENST00000429846 OR2T4Q8NH00 348 aa12.38□□□□□ -0.43
MSH5-208ENST00000429846 GNPDA2Q8TDQ7 276 aa12.38□□□□□ -0.43
MSH5-208ENST00000429846 NSMCE2Q96MF7 247 aa12.38□□□□□ -0.43
MSH5-208ENST00000429846 IL1RAPQ9NPH3 570 aa12.38□□□□□ -0.43
MSH5-208ENST00000429846 CTSZQ9UBR2 303 aa12.38□□□□□ -0.43
MSH5-208ENST00000429846 POMT1Q9Y6A1 747 aa12.38□□□□□ -0.43
MSH5-208ENST00000429846 CDH10Q9Y6N8 788 aa12.38□□□□□ -0.43
MSH5-208ENST00000429846 GGT3PA6NGU5 568 aa12.37□□□□□ -0.43
MSH5-208ENST00000429846 CRYBA1P05813 215 aa12.37□□□□□ -0.43
MSH5-208ENST00000429846 ZNF92Q03936 586 aa12.37□□□□□ -0.43
MSH5-208ENST00000429846 OR8B8Q15620 311 aa12.37□□□□□ -0.43
MSH5-208ENST00000429846 OCLNQ16625 522 aa12.37□□□□□ -0.43
MSH5-208ENST00000429846 SNAI3Q3KNW1 292 aa12.37□□□□□ -0.43
MSH5-208ENST00000429846 SLC35F1Q5T1Q4 408 aa12.37□□□□□ -0.43
MSH5-208ENST00000429846 PGBD2Q6P3X8 592 aa12.37□□□□□ -0.43
MSH5-208ENST00000429846 PGAM4Q8N0Y7 254 aa12.37□□□□□ -0.43
MSH5-208ENST00000429846 LINC00471Q8N535 108 aa12.37□□□□□ -0.43
MSH5-208ENST00000429846 PNLDC1Q8NA58 520 aaKnown RBP12.37□□□□□ -0.43
MSH5-208ENST00000429846 C19orf18Q8NEA5 215 aa12.37□□□□□ -0.43
MSH5-208ENST00000429846 OR4F5Q8NH21 305 aa12.37□□□□□ -0.43
MSH5-208ENST00000429846 FAM71F1Q96KD3 344 aaPredicted RBP12.37□□□□□ -0.43
MSH5-208ENST00000429846 PCGF1Q9BSM1 259 aa12.37□□□□□ -0.43
MSH5-208ENST00000429846 BEX1Q9HBH7 125 aa12.37□□□□□ -0.43
MSH5-208ENST00000429846 CD300AQ9UGN4 299 aa12.37□□□□□ -0.43
MSH5-208ENST00000429846 SOX21Q9Y651 276 aaPredicted RBP12.37□□□□□ -0.43
MSH5-208ENST00000429846 TRRAPQ9Y4A5 3859 aa12.37□□□□□ -0.43
MSH5-208ENST00000429846 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP12.36□□□□□ -0.43
MSH5-208ENST00000429846 FAM181BA6NEQ2 426 aa12.36□□□□□ -0.43
MSH5-208ENST00000429846 OOEPA6NGQ2 149 aa12.36□□□□□ -0.43
MSH5-208ENST00000429846 BHLHE40O14503 412 aa12.36□□□□□ -0.43
MSH5-208ENST00000429846 TNFRSF13BO14836 293 aaPredicted RBP12.36□□□□□ -0.43
MSH5-208ENST00000429846 ARPC2O15144 300 aa12.36□□□□□ -0.43
MSH5-208ENST00000429846 ADAM20O43506 726 aa12.36□□□□□ -0.43
MSH5-208ENST00000429846 XRCC2O43543 280 aa12.36□□□□□ -0.43
MSH5-208ENST00000429846 KRT36O76013 467 aa12.36□□□□□ -0.43
MSH5-208ENST00000429846 TOX4O94842 621 aa12.36□□□□□ -0.43
MSH5-208ENST00000429846 KNG1P01042 644 aa12.36□□□□□ -0.43
MSH5-208ENST00000429846 MMP9P14780 707 aa12.36□□□□□ -0.43
MSH5-208ENST00000429846 DBPQ10586 325 aaPredicted RBP12.36□□□□□ -0.43
MSH5-208ENST00000429846 METTL11BQ5VVY1 283 aa12.36□□□□□ -0.43
MSH5-208ENST00000429846 ZDHHC21Q8IVQ6 265 aa12.36□□□□□ -0.43
MSH5-208ENST00000429846 OR2AE1Q8NHA4 323 aa12.36□□□□□ -0.43
MSH5-208ENST00000429846 SSMEM1Q8WWF3 244 aa12.36□□□□□ -0.43
MSH5-208ENST00000429846 WFDC12Q8WWY7 111 aa12.36□□□□□ -0.43
MSH5-208ENST00000429846 GATAD2BQ8WXI9 593 aa12.36□□□□□ -0.43
MSH5-208ENST00000429846 ELAC2Q9BQ52 826 aaKnown RBP12.36□□□□□ -0.43
MSH5-208ENST00000429846 COPS4Q9BT78 406 aa12.36□□□□□ -0.43
MSH5-208ENST00000429846 C14orf119Q9NWQ9 140 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms