RNA–Protein interactions for RNA: ENST00000429713.6

SYNPO2-202, Transcript of synaptopodin 2, humanhuman

TSL 1 (best) BASIC

Gene SYNPO2, Length 9,920 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-202ENST00000429713 NEIL2Q969S2 332 aa6.87□□□□□ -1.31
SYNPO2-202ENST00000429713 MS4A6EQ96DS6 147 aa6.87□□□□□ -1.31
SYNPO2-202ENST00000429713 GAB2Q9UQC2 676 aa6.87□□□□□ -1.31
SYNPO2-202ENST00000429713 DTX4Q9Y2E6 619 aa6.87□□□□□ -1.31
SYNPO2-202ENST00000429713 UBE2J1Q9Y385 318 aaPredicted RBP6.87□□□□□ -1.31
SYNPO2-202ENST00000429713 ZNF337Q9Y3M9 751 aa6.87□□□□□ -1.31
SYNPO2-202ENST00000429713 UTRNP46939 3433 aa6.86□□□□□ -1.31
SYNPO2-202ENST00000429713 TRBV4-1A0A0J9YWV2 114 aa6.86□□□□□ -1.31
SYNPO2-202ENST00000429713 VEGFDO43915 354 aa6.86□□□□□ -1.31
SYNPO2-202ENST00000429713 POU3F2P20265 443 aaPredicted RBP6.86□□□□□ -1.31
SYNPO2-202ENST00000429713 INSM1Q01101 510 aaPredicted RBP6.86□□□□□ -1.31
SYNPO2-202ENST00000429713 DHRS2Q13268 280 aa6.86□□□□□ -1.31
SYNPO2-202ENST00000429713 SLC22A24Q8N4F4 322 aa6.86□□□□□ -1.31
SYNPO2-202ENST00000429713 WFIKKN2Q8TEU8 576 aa6.86□□□□□ -1.31
SYNPO2-202ENST00000429713 CDS1Q92903 461 aa6.86□□□□□ -1.31
SYNPO2-202ENST00000429713 FAM3DQ96BQ1 224 aa6.86□□□□□ -1.31
SYNPO2-202ENST00000429713 SLC35E1Q96K37 410 aa6.86□□□□□ -1.31
SYNPO2-202ENST00000429713 IMMP2LQ96T52 175 aa6.86□□□□□ -1.31
SYNPO2-202ENST00000429713 C11orf84Q9BUA3 381 aaPredicted RBP6.86□□□□□ -1.31
SYNPO2-202ENST00000429713 MARCH11A6NNE9 402 aa6.86□□□□□ -1.31
SYNPO2-202ENST00000429713 AKR1C4P17516 323 aa6.86□□□□□ -1.31
SYNPO2-202ENST00000429713 KLF9Q13886 244 aaPredicted RBP6.86□□□□□ -1.31
SYNPO2-202ENST00000429713 HSF5Q4G112 596 aaPredicted RBP6.86□□□□□ -1.31
SYNPO2-202ENST00000429713 C5AR2Q9P296 337 aa6.86□□□□□ -1.31
SYNPO2-202ENST00000429713 C1orf226A1L170 272 aa6.86□□□□□ -1.31
SYNPO2-202ENST00000429713 IGHA1P01876 353 aa6.86□□□□□ -1.31
SYNPO2-202ENST00000429713 CTSAP10619 480 aa6.86□□□□□ -1.31
SYNPO2-202ENST00000429713 AK4P27144 223 aaPredicted RBP6.86□□□□□ -1.31
SYNPO2-202ENST00000429713 GABRA4P48169 554 aa6.86□□□□□ -1.31
SYNPO2-202ENST00000429713 GNG10P50151 68 aa6.86□□□□□ -1.31
SYNPO2-202ENST00000429713 IAH1Q2TAA2 248 aaPredicted RBP6.86□□□□□ -1.31
SYNPO2-202ENST00000429713 ZNF528Q3MIS6 628 aa6.86□□□□□ -1.31
SYNPO2-202ENST00000429713 PIP5KL1Q5T9C9 394 aa6.86□□□□□ -1.31
SYNPO2-202ENST00000429713 SBSNQ6UWP8 590 aa6.86□□□□□ -1.31
SYNPO2-202ENST00000429713 SCAMP4Q969E2 229 aa6.86□□□□□ -1.31
SYNPO2-202ENST00000429713 C4orf36Q96KX1 117 aa6.86□□□□□ -1.31
SYNPO2-202ENST00000429713 NIPSNAP1Q9BPW8 284 aa6.86□□□□□ -1.31
SYNPO2-202ENST00000429713 LHX3Q9UBR4 397 aa6.86□□□□□ -1.31
SYNPO2-202ENST00000429713 NAT8BQ9UHF3 227 aa6.86□□□□□ -1.31
SYNPO2-202ENST00000429713 RABAC1Q9UI14 185 aa6.86□□□□□ -1.31
SYNPO2-202ENST00000429713 INSL5Q9Y5Q6 135 aa6.86□□□□□ -1.31
SYNPO2-202ENST00000429713 HSD17B6O14756 317 aa6.86□□□□□ -1.31
SYNPO2-202ENST00000429713 FASLGP48023 281 aa6.86□□□□□ -1.31
SYNPO2-202ENST00000429713 CEBPEQ15744 281 aa6.86□□□□□ -1.31
SYNPO2-202ENST00000429713 MORN1Q5T089 497 aa6.86□□□□□ -1.31
SYNPO2-202ENST00000429713 ZNF429Q86V71 674 aa6.86□□□□□ -1.31
SYNPO2-202ENST00000429713 HCAR1Q9BXC0 346 aa6.86□□□□□ -1.31
SYNPO2-202ENST00000429713 TMEM9BQ9NQ34 198 aa6.86□□□□□ -1.31
SYNPO2-202ENST00000429713 NAT8Q9UHE5 227 aa6.86□□□□□ -1.31
SYNPO2-202ENST00000429713 PIAS3Q9Y6X2 628 aa6.86□□□□□ -1.31
SYNPO2-202ENST00000429713 AGRNO00468 2067 aa6.86□□□□□ -1.31
SYNPO2-202ENST00000429713 GPR37O15354 613 aa6.86□□□□□ -1.31
SYNPO2-202ENST00000429713 OR7C2O60412 319 aa6.86□□□□□ -1.31
SYNPO2-202ENST00000429713 IL13RA2Q14627 380 aa6.86□□□□□ -1.31
SYNPO2-202ENST00000429713 NCR3LG1Q68D85 454 aa6.86□□□□□ -1.31
SYNPO2-202ENST00000429713 SCD5Q86SK9 330 aa6.86□□□□□ -1.31
SYNPO2-202ENST00000429713 ISG20Q96AZ6 181 aaKnown RBP6.86□□□□□ -1.31
SYNPO2-202ENST00000429713 RALYQ9UKM9 306 aaKnown RBP6.86□□□□□ -1.31
SYNPO2-202ENST00000429713 RNF24Q9Y225 148 aa6.86□□□□□ -1.31
SYNPO2-202ENST00000429713 KCNMB2Q9Y691 235 aa6.86□□□□□ -1.31
SYNPO2-202ENST00000429713 HRASP01112 189 aa6.86□□□□□ -1.31
SYNPO2-202ENST00000429713 EGR3Q06889 387 aa6.86□□□□□ -1.31
SYNPO2-202ENST00000429713 FCRL6Q6DN72 434 aa6.86□□□□□ -1.31
SYNPO2-202ENST00000429713 TGIF2LXQ8IUE1 241 aa6.86□□□□□ -1.31
SYNPO2-202ENST00000429713 KREMEN2Q8NCW0 462 aa6.86□□□□□ -1.31
SYNPO2-202ENST00000429713 TRBV11-1A0A0K0K1C0 115 aa6.86□□□□□ -1.31
SYNPO2-202ENST00000429713 APBB3O95704 486 aa6.86□□□□□ -1.31
SYNPO2-202ENST00000429713 TACR1P25103 407 aa6.86□□□□□ -1.31
SYNPO2-202ENST00000429713 ACKR3P25106 362 aa6.86□□□□□ -1.31
SYNPO2-202ENST00000429713 CSNK2A1P68400 391 aaPredicted RBP6.86□□□□□ -1.31
SYNPO2-202ENST00000429713 IER5LQ5T953 404 aa6.86□□□□□ -1.31
SYNPO2-202ENST00000429713 Q6ZN92 141 aa6.86□□□□□ -1.31
SYNPO2-202ENST00000429713 LDLRAD3Q86YD5 345 aa6.86□□□□□ -1.31
SYNPO2-202ENST00000429713 ZNF573Q86YE8 665 aa6.86□□□□□ -1.31
SYNPO2-202ENST00000429713 CBLN2Q8IUK8 224 aa6.86□□□□□ -1.31
SYNPO2-202ENST00000429713 PUSL1Q8N0Z8 303 aaKnown RBP6.86□□□□□ -1.31
SYNPO2-202ENST00000429713 CISD2Q8N5K1 135 aaKnown RBP6.86□□□□□ -1.31
SYNPO2-202ENST00000429713 CSNK2A3Q8NEV1 391 aa6.86□□□□□ -1.31
SYNPO2-202ENST00000429713 NUBPLQ8TB37 319 aa6.86□□□□□ -1.31
SYNPO2-202ENST00000429713 ACER3Q9NUN7 267 aa6.86□□□□□ -1.31
SYNPO2-202ENST00000429713 NPIPB15A6NHN6 443 aaPredicted RBP6.85□□□□□ -1.31
SYNPO2-202ENST00000429713 ZNF727A8MUV8 499 aa6.85□□□□□ -1.31
SYNPO2-202ENST00000429713 ZNF878C9JN71 531 aa6.85□□□□□ -1.31
SYNPO2-202ENST00000429713 VENTXO95231 258 aa6.85□□□□□ -1.31
SYNPO2-202ENST00000429713 IGHA2P01877 340 aa6.85□□□□□ -1.31
SYNPO2-202ENST00000429713 CSTBP04080 98 aaKnown RBP6.85□□□□□ -1.31
SYNPO2-202ENST00000429713 GABRA3P34903 492 aa6.85□□□□□ -1.31
SYNPO2-202ENST00000429713 PMS2P11Q13670 270 aa6.85□□□□□ -1.31
SYNPO2-202ENST00000429713 ST3GAL2Q16842 350 aa6.85□□□□□ -1.31
SYNPO2-202ENST00000429713 C11orf42Q8N5U0 333 aa6.85□□□□□ -1.31
SYNPO2-202ENST00000429713 AKR1E2Q96JD6 320 aa6.85□□□□□ -1.31
SYNPO2-202ENST00000429713 TP53RKQ96S44 253 aa6.85□□□□□ -1.31
SYNPO2-202ENST00000429713 SERINC1Q9NRX5 453 aa6.85□□□□□ -1.31
SYNPO2-202ENST00000429713 TAPBPO15533 448 aa6.85□□□□□ -1.31
SYNPO2-202ENST00000429713 CD14P08571 375 aa6.85□□□□□ -1.31
SYNPO2-202ENST00000429713 KIR3DL2P43630 455 aa6.85□□□□□ -1.31
SYNPO2-202ENST00000429713 CLDN6P56747 220 aa6.85□□□□□ -1.31
SYNPO2-202ENST00000429713 HLA-DRB3P79483 266 aa6.85□□□□□ -1.31
SYNPO2-202ENST00000429713 LINC01559Q495D7 138 aa6.85□□□□□ -1.31
SYNPO2-202ENST00000429713 H1FOOQ8IZA3 346 aaPredicted RBP6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms